RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 ZMPSTE24O75844 475 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 VNN1O95497 513 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 HMGCRP04035 888 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 CYP1A2P05177 515 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 CCDC130P13994 396 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 GARTP22102 1010 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 NAMPTP43490 491 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 WDR4P57081 412 aaKnown RBP10.19□□□□□ -0.78
TRAF1-203ENST00000546084 POU5F1BQ06416 359 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 MGAT5Q09328 741 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 CHI3L2Q15782 390 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 HABP4Q5JVS0 413 aaKnown RBP10.19□□□□□ -0.78
TRAF1-203ENST00000546084 LGSNQ5TDP6 509 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 HEATR6Q6AI08 1181 aaKnown RBP10.19□□□□□ -0.78
TRAF1-203ENST00000546084 SCN4BQ8IWT1 228 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 DNAJC9Q8WXX5 260 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 CGRRF1Q99675 332 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 GOLGA8QA0A0J9YX86 632 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 DYTNA2CJ06 578 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 GOLGA8OA6NCC3 632 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 GOLGA8NF8WBI6 632 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 CYB561D2O14569 222 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 AMPD1P23109 780 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 AVPR1AP37288 418 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 PGGT1BP53609 377 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 PTPN11Q06124 597 aaPredicted RBP10.19□□□□□ -0.78
TRAF1-203ENST00000546084 CCDC142Q17RM4 750 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 NLRP9Q7RTR0 991 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 CCDC125Q86Z20 511 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 FAM13CQ8NE31 585 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 SYT11Q9BT88 431 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 VCXQ9H320 206 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 MINDY3Q9H8M7 445 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 PLSCR1O15162 318 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 SPTLC1O15269 473 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 TSPAN3O60637 253 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 MSX2P35548 267 aaPredicted RBP10.19□□□□□ -0.78
TRAF1-203ENST00000546084 ZNF200P98182 395 aaPredicted RBP10.19□□□□□ -0.78
TRAF1-203ENST00000546084 OGDHQ02218 1023 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 GCNT1Q02742 428 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 CCNG2Q16589 344 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 GALNTL6Q49A17 601 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 DPY19L2Q6NUT2 758 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 POTEAQ6S8J7 498 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 ANKS1BQ7Z6G8 1248 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 STK32AQ8WU08 396 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 BHMTQ93088 406 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 CELF6Q96J87 481 aaKnown RBP10.19□□□□□ -0.78
TRAF1-203ENST00000546084 KLC2Q9H0B6 622 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 PORCNQ9H237 461 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 CHCHD3Q9NX63 227 aaKnown RBP10.19□□□□□ -0.78
TRAF1-203ENST00000546084 PSMC3IPQ9P2W1 217 aaPredicted RBP10.19□□□□□ -0.78
TRAF1-203ENST00000546084 CHKBQ9Y259 395 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 PLIN4Q96Q06 1357 aa10.19□□□□□ -0.78
TRAF1-203ENST00000546084 B2RBV5 119 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 OPHN1O60890 802 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 RGS20O76081 388 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 SERPINB3P29508 390 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 TYK2P29597 1187 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 RPL22P35268 128 aaKnown RBP10.18□□□□□ -0.78
TRAF1-203ENST00000546084 NCKAP1LP55160 1127 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 RPL10AP62906 217 aaKnown RBP10.18□□□□□ -0.78
TRAF1-203ENST00000546084 KLC1Q07866 573 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 SLC12A1Q13621 1099 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 PTK6Q13882 451 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 RNF43Q68DV7 783 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 UNC5BQ8IZJ1 945 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 SLITRK1Q96PX8 696 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 TWNKQ96RR1 684 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 ZCWPW1Q9H0M4 648 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 CNTNAP1P78357 1384 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 IQANK1A0A1B0GTG1 560 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 ARIH2O95376 493 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 HMBSP08397 361 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 MYL2P10916 166 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 PTDSS1P48651 473 aaKnown RBP10.18□□□□□ -0.78
TRAF1-203ENST00000546084 PIGHQ14442 188 aaPredicted RBP10.18□□□□□ -0.78
TRAF1-203ENST00000546084 PCSK7Q16549 785 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 CYP1B1Q16678 543 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 SLC9A9Q8IVB4 645 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 KCTD17Q8N5Z5 321 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 DDX27Q96GQ7 796 aaKnown RBP10.18□□□□□ -0.78
TRAF1-203ENST00000546084 PTPRHQ9HD43 1115 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 TMPRSS4Q9NRS4 437 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 DPP3Q9NY33 737 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 ZNF214Q9UL59 606 aaPredicted RBP10.18□□□□□ -0.78
TRAF1-203ENST00000546084 FAM237BA0A1B0GVD1 139 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 CLDN5O00501 218 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 BNIP3LO60238 219 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 TRPA1O75762 1119 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 KRT37O76014 449 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 MICAL2O94851 1124 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 FDX1P10109 184 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 VCPP55072 806 aaKnown RBP10.18□□□□□ -0.78
TRAF1-203ENST00000546084 OLIG2Q13516 323 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 SIX1Q15475 284 aaPredicted RBP10.18□□□□□ -0.78
TRAF1-203ENST00000546084 FNBP1LQ5T0N5 605 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 DSTYKQ6XUX3 929 aa10.18□□□□□ -0.78
TRAF1-203ENST00000546084 SYDE1Q6ZW31 735 aaPredicted RBP10.18□□□□□ -0.78
TRAF1-203ENST00000546084 RNF168Q8IYW5 571 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms