RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 FKBP1CQ5VVH2 108 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.95□□□□□ -0.34
COL4A6-209ENST00000545689 NEUROG2Q9H2A3 272 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 SOX13Q9UN79 622 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 ARHGEF9O43307 516 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 KPNA6O60684 536 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 EGFRP00533 1210 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 DSG3P32926 999 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 PSMC6P62333 389 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 TMEM62Q0P6H9 643 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 PRPF18Q99633 342 aaKnown RBP12.95□□□□□ -0.34
COL4A6-209ENST00000545689 MRIQ9BWK5 157 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 COLEC11Q9BWP8 271 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 LATS2Q9NRM7 1088 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 TBC1D23Q9NUY8 699 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 CYP3A7-CYP3A51PA0A087WV96 503 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 CYP3A7P24462 503 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 PSMA4P25789 261 aaKnown RBP12.95□□□□□ -0.34
COL4A6-209ENST00000545689 AKT1P31749 480 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 NUDT2P50583 147 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 ZNF135P52742 658 aaPredicted RBP12.95□□□□□ -0.34
COL4A6-209ENST00000545689 MYL6P60660 151 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 SNX31Q8N9S9 440 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 TERB1Q8NA31 727 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 WNK4Q96J92 1243 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 C17orf80Q9BSJ5 609 aa12.95□□□□□ -0.34
COL4A6-209ENST00000545689 BARX2Q9UMQ3 279 aaPredicted RBP12.95□□□□□ -0.34
COL4A6-209ENST00000545689 VWA5AO00534 786 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 MGAT5Q09328 741 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 LAMTOR4Q0VGL1 99 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 ITGA9Q13797 1035 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 CCDC153Q494R4 210 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 CREG2Q8IUH2 290 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 RIN3Q8TB24 985 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 TMEM120AQ9BXJ8 343 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 ASB7Q9H672 318 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 TRPC7Q9HCX4 862 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 SCN3BQ9NY72 215 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 TRMT6Q9UJA5 497 aaKnown RBP12.94□□□□□ -0.34
COL4A6-209ENST00000545689 SHPRHQ149N8 1683 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 HACD1B0YJ81 288 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 RGS2P41220 211 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 TGFB2P61812 414 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 POU4F1Q01851 419 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 ACOT1Q86TX2 421 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 CYGBQ8WWM9 190 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 MKL1Q969V6 931 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 CENPTQ96BT3 561 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 GANQ9H2C0 597 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 TBC1D13Q9NVG8 400 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 EIF3LQ9Y262 564 aaKnown RBP12.94□□□□□ -0.34
COL4A6-209ENST00000545689 NCANO14594 1321 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 DDX3XO00571 662 aaKnown RBP eCLIP12.94□□□□□ -0.34
COL4A6-209ENST00000545689 SYF2O95926 243 aaKnown RBP12.94□□□□□ -0.34
COL4A6-209ENST00000545689 DNAJB2P25686 324 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 RCN1Q15293 331 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 C10orf120Q5SQS8 335 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 SEL1L3Q68CR1 1132 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 BNC2Q6ZN30 1099 aaPredicted RBP12.94□□□□□ -0.34
COL4A6-209ENST00000545689 KATNAL2Q8IYT4 538 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 NAALADL1Q9UQQ1 740 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 ADGRA3Q8IWK6 1321 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 FAM86B1E9PN63 330 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 NFIBO00712 420 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 FAM86B2P0C5J1 330 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 ZNF844Q08AG5 666 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 MGAT5BQ3V5L5 792 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 ADCK1Q86TW2 530 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 SLC22A9Q8IVM8 553 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 ARHGEF19Q8IW93 802 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 TMEM121Q9BTD3 319 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 GPR63Q9BZJ6 419 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 SH3BP1Q9Y3L3 701 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 GAKO14976 1311 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 SPDYE5A6NIY4 337 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 MAP2K7O14733 419 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 HMBSP08397 361 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 MAPK1P28482 360 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
COL4A6-209ENST00000545689 CYLC2Q14093 348 aaPredicted RBP12.94□□□□□ -0.34
COL4A6-209ENST00000545689 SPDYE7PQ495Y7 208 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 ERMARDQ5T6L9 678 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 DENND1BQ6P3S1 775 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 TEKT4Q8WW24 435 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 RXFP2Q8WXD0 754 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 RMDN2Q96LZ7 410 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 POP1Q99575 1024 aaKnown RBP12.94□□□□□ -0.34
COL4A6-209ENST00000545689 CCT7Q99832 543 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 KCNMB3Q9NPA1 279 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 HAO1Q9UJM8 370 aa12.94□□□□□ -0.34
COL4A6-209ENST00000545689 RIC1Q4ADV7 1423 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 EVPLLA8MZ36 301 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 SEC24DO94855 1032 aaPredicted RBP12.93□□□□□ -0.34
COL4A6-209ENST00000545689 KPNA1P52294 538 aaPredicted RBP12.93□□□□□ -0.34
COL4A6-209ENST00000545689 ERVK-9P63128 1117 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 CRYMQ14894 314 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 TRMT5Q32P41 509 aaKnown RBP12.93□□□□□ -0.34
COL4A6-209ENST00000545689 GRTP1Q5TC63 336 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 BRSK2Q8IWQ3 736 aa12.93□□□□□ -0.34
COL4A6-209ENST00000545689 CERKQ8TCT0 537 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms