RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 CCDC173Q0VFZ6 552 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 PTP4A2Q12974 167 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 MTMR3Q13615 1198 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 NAA35Q5VZE5 725 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 GPR149Q86SP6 731 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 LRRC8AQ8IWT6 810 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 CCDC170Q8IYT3 715 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 ELMOD1Q8N336 334 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 MICALL1Q8N3F8 863 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 C12orf76Q8N812 135 aaPredicted RBP13.78□□□□□ -0.2
DDX11-227ENST00000544652 STKLD1Q8NE28 680 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 SCAMP5Q8TAC9 235 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 FEZF2Q8TBJ5 459 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 CPA5Q8WXQ8 436 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 PPP1R13BQ96KQ4 1090 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 BAG1Q99933 345 aaPredicted RBP13.78□□□□□ -0.2
DDX11-227ENST00000544652 FBXO44Q9H4M3 255 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 LRRC4Q9HBW1 653 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 AVENQ9NQS1 362 aaPredicted RBP13.78□□□□□ -0.2
DDX11-227ENST00000544652 CNGB3Q9NQW8 809 aa13.78□□□□□ -0.2
DDX11-227ENST00000544652 DNMT3BQ9UBC3 853 aaKnown RBP13.78□□□□□ -0.2
DDX11-227ENST00000544652 E5RJQ4 531 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 RTN2O75298 545 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 YWHAQP27348 245 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 NSFP46459 744 aaKnown RBP13.77□□□□□ -0.21
DDX11-227ENST00000544652 SNX16P57768 344 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 FOXK1P85037 733 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 ITIH3Q06033 890 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 ADIGQ0VDE8 80 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 MON1BQ7L1V2 547 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 BHLHA9Q7RTU4 235 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 ERICH1Q86X53 443 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 PLPP6Q8IY26 295 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 LEMD2Q8NC56 503 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 OVCA2Q8WZ82 227 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 SMG7Q92540 1137 aaKnown RBP13.77□□□□□ -0.21
DDX11-227ENST00000544652 VCPIP1Q96JH7 1222 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 CCDC42Q96M95 316 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.77□□□□□ -0.21
DDX11-227ENST00000544652 ADAM7Q9H2U9 754 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 KDM4CQ9H3R0 1056 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 IL21Q9HBE4 155 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 ZNF334Q9HCZ1 680 aaPredicted RBP13.77□□□□□ -0.21
DDX11-227ENST00000544652 SEPT11Q9NVA2 429 aaKnown RBP13.77□□□□□ -0.21
DDX11-227ENST00000544652 HCFC1R1Q9NWW0 138 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 TAS2R14Q9NYV8 317 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 UXTQ9UBK9 157 aaPredicted RBP13.77□□□□□ -0.21
DDX11-227ENST00000544652 TJP2Q9UDY2 1190 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 SCML2Q9UQR0 700 aa13.77□□□□□ -0.21
DDX11-227ENST00000544652 PAPSS1O43252 624 aaPredicted RBP13.76□□□□□ -0.21
DDX11-227ENST00000544652 AKR1B10O60218 316 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 FBXO21O94952 628 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 F11P03951 625 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 ERBB2P04626 1255 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 ZDHHC11BP0C7U3 371 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 LCP1P13796 627 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 PPP3CCP48454 512 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 DAOAP59103 153 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 GFPT1Q06210 699 aaPredicted RBP13.76□□□□□ -0.21
DDX11-227ENST00000544652 CCDC85BQ15834 202 aaPredicted RBP13.76□□□□□ -0.21
DDX11-227ENST00000544652 PRSS36Q5K4E3 855 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 RARS2Q5T160 578 aaKnown RBP13.76□□□□□ -0.21
DDX11-227ENST00000544652 SNX30Q5VWJ9 437 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 ALKBH5Q6P6C2 394 aaKnown RBP13.76□□□□□ -0.21
DDX11-227ENST00000544652 TMC5Q6UXY8 1006 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 RAD9BQ6WBX8 426 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 TMEM150AQ86TG1 271 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 ZDHHC17Q8IUH5 632 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 MCOLN2Q8IZK6 566 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 SMRP1Q8NCR6 262 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 MSANTD4Q8NCY6 345 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 CCDC112Q8NEF3 446 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 IPO4Q8TEX9 1081 aaKnown RBP13.76□□□□□ -0.21
DDX11-227ENST00000544652 IRGQQ8WZA9 623 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 C18orf8Q96DM3 657 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 ULBP1Q9BZM6 244 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 MIS12Q9H081 205 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 DEF6Q9H4E7 631 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 UBE2ZQ9H832 354 aaPredicted RBP13.76□□□□□ -0.21
DDX11-227ENST00000544652 ST7Q9NRC1 585 aa13.76□□□□□ -0.21
DDX11-227ENST00000544652 BRWD1Q9NSI6 2320 aa13.75□□□□□ -0.21
DDX11-227ENST00000544652 TCRBV5S1A1TA0A578 114 aa13.75□□□□□ -0.21
DDX11-227ENST00000544652 GRXCR2A6NFK2 248 aa13.75□□□□□ -0.21
DDX11-227ENST00000544652 SOWAHDA6NJG2 315 aa13.75□□□□□ -0.21
DDX11-227ENST00000544652 EIF3CLB5ME19 914 aaKnown RBP13.75□□□□□ -0.21
DDX11-227ENST00000544652 ZNF263O14978 683 aa13.75□□□□□ -0.21
DDX11-227ENST00000544652 GALR2O43603 387 aaPredicted RBP13.75□□□□□ -0.21
DDX11-227ENST00000544652 TADA3O75528 432 aa13.75□□□□□ -0.21
DDX11-227ENST00000544652 FGF19O95750 216 aa13.75□□□□□ -0.21
DDX11-227ENST00000544652 ZBED1O96006 694 aa13.75□□□□□ -0.21
DDX11-227ENST00000544652 FTLP02792 175 aaPredicted RBP13.75□□□□□ -0.21
DDX11-227ENST00000544652 RHOP08100 348 aa13.75□□□□□ -0.21
DDX11-227ENST00000544652 USP17L7P0C7H9 530 aa13.75□□□□□ -0.21
DDX11-227ENST00000544652 CYLC1P35663 651 aaPredicted RBP13.75□□□□□ -0.21
DDX11-227ENST00000544652 SCNN1AP37088 669 aa13.75□□□□□ -0.21
DDX11-227ENST00000544652 MRPS5P82675 430 aaKnown RBP13.75□□□□□ -0.21
DDX11-227ENST00000544652 CCZ1BP86790 482 aa13.75□□□□□ -0.21
DDX11-227ENST00000544652 CCZ1P86791 482 aaPredicted RBP13.75□□□□□ -0.21
DDX11-227ENST00000544652 TAF10Q12962 218 aa13.75□□□□□ -0.21
DDX11-227ENST00000544652 ZNF268Q14587 947 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms