RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 UBA3Q8TBC4 463 aa22.98■■□□□ 1.27
OTUB1-212ENST00000543988 SH3RF2Q8TEC5 729 aa22.98■■□□□ 1.27
OTUB1-212ENST00000543988 FUCA2Q9BTY2 467 aa22.98■■□□□ 1.27
OTUB1-212ENST00000543988 NAT10Q9H0A0 1025 aaKnown RBP22.98■■□□□ 1.27
OTUB1-212ENST00000543988 RNF38Q9H0F5 515 aa22.98■■□□□ 1.27
OTUB1-212ENST00000543988 VPS16Q9H269 839 aa22.98■■□□□ 1.27
OTUB1-212ENST00000543988 CCSER2Q9H7U1 834 aa22.98■■□□□ 1.27
OTUB1-212ENST00000543988 TRPV5Q9NQA5 729 aa22.98■■□□□ 1.27
OTUB1-212ENST00000543988 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.98■■□□□ 1.27
OTUB1-212ENST00000543988 PATJQ8NI35 1801 aa22.98■■□□□ 1.27
OTUB1-212ENST00000543988 SYCE3A1L190 88 aa22.97■■□□□ 1.27
OTUB1-212ENST00000543988 BECN2A8MW95 431 aa22.97■■□□□ 1.27
OTUB1-212ENST00000543988 XPO1O14980 1071 aaKnown RBP22.97■■□□□ 1.27
OTUB1-212ENST00000543988 COCHO43405 550 aa22.97■■□□□ 1.27
OTUB1-212ENST00000543988 SETSIPP0DME0 302 aa22.97■■□□□ 1.27
OTUB1-212ENST00000543988 ZNF18P17022 549 aa22.97■■□□□ 1.27
OTUB1-212ENST00000543988 SLC8A3P57103 927 aa22.97■■□□□ 1.27
OTUB1-212ENST00000543988 SLC7A9P82251 487 aa22.97■■□□□ 1.27
OTUB1-212ENST00000543988 PRKCQQ04759 706 aa22.97■■□□□ 1.27
OTUB1-212ENST00000543988 KCNMA1Q12791 1236 aa22.97■■□□□ 1.27
OTUB1-212ENST00000543988 PKDCCQ504Y2 493 aa22.97■■□□□ 1.27
OTUB1-212ENST00000543988 HECTD3Q5T447 861 aa22.97■■□□□ 1.27
OTUB1-212ENST00000543988 ASTLQ6HA08 431 aaPredicted RBP22.97■■□□□ 1.27
OTUB1-212ENST00000543988 TPRG1Q6ZUI0 275 aa22.97■■□□□ 1.27
OTUB1-212ENST00000543988 SHC3Q92529 594 aa22.97■■□□□ 1.27
OTUB1-212ENST00000543988 SHDQ96IW2 340 aa22.97■■□□□ 1.27
OTUB1-212ENST00000543988 FAM81BQ96LP2 452 aa22.97■■□□□ 1.27
OTUB1-212ENST00000543988 UBXN6Q9BZV1 441 aa22.97■■□□□ 1.27
OTUB1-212ENST00000543988 THG1LQ9NWX6 298 aaKnown RBP22.97■■□□□ 1.27
OTUB1-212ENST00000543988 SMPD4Q9NXE4 827 aa22.97■■□□□ 1.27
OTUB1-212ENST00000543988 USP3Q9Y6I4 520 aa22.97■■□□□ 1.27
OTUB1-212ENST00000543988 M0QYV0 167 aa22.96■■□□□ 1.27
OTUB1-212ENST00000543988 RFX1P22670 979 aa22.96■■□□□ 1.27
OTUB1-212ENST00000543988 TUBP50607 506 aa22.96■■□□□ 1.27
OTUB1-212ENST00000543988 STARD6P59095 220 aa22.96■■□□□ 1.27
OTUB1-212ENST00000543988 ZXDBP98169 803 aa22.96■■□□□ 1.27
OTUB1-212ENST00000543988 PLCB2Q00722 1185 aa22.96■■□□□ 1.27
OTUB1-212ENST00000543988 TNK2Q07912 1038 aa22.96■■□□□ 1.27
OTUB1-212ENST00000543988 MTF1Q14872 753 aa22.96■■□□□ 1.27
OTUB1-212ENST00000543988 CNGA2Q16280 664 aa22.96■■□□□ 1.27
OTUB1-212ENST00000543988 RAB41Q5JT25 222 aa22.96■■□□□ 1.27
OTUB1-212ENST00000543988 CCDC186Q7Z3E2 898 aa22.96■■□□□ 1.27
OTUB1-212ENST00000543988 TMEM105Q8N8V8 129 aa22.96■■□□□ 1.27
OTUB1-212ENST00000543988 DDX23Q9BUQ8 820 aaKnown RBP22.96■■□□□ 1.27
OTUB1-212ENST00000543988 LSM14BQ9BX40 385 aaKnown RBP22.96■■□□□ 1.27
OTUB1-212ENST00000543988 FOXQ1Q9C009 403 aa22.96■■□□□ 1.27
OTUB1-212ENST00000543988 NMUR1Q9HB89 426 aa22.96■■□□□ 1.27
OTUB1-212ENST00000543988 ACP6Q9NPH0 428 aa22.96■■□□□ 1.27
OTUB1-212ENST00000543988 TLR8Q9NR97 1041 aaKnown RBP22.96■■□□□ 1.27
OTUB1-212ENST00000543988 OSER1Q9NX31 292 aa22.96■■□□□ 1.27
OTUB1-212ENST00000543988 RAPGEFL1Q9UHV5 662 aa22.96■■□□□ 1.27
OTUB1-212ENST00000543988 DNAJC12Q9UKB3 198 aa22.96■■□□□ 1.27
OTUB1-212ENST00000543988 CPQQ9Y646 472 aa22.96■■□□□ 1.27
OTUB1-212ENST00000543988 COL4A2P08572 1712 aa22.96■■□□□ 1.27
OTUB1-212ENST00000543988 A0A1W2PQH9 124 aa22.95■■□□□ 1.26
OTUB1-212ENST00000543988 SHISA7A6NL88 538 aa22.95■■□□□ 1.26
OTUB1-212ENST00000543988 STK25O00506 426 aa22.95■■□□□ 1.26
OTUB1-212ENST00000543988 PLA2G4AP47712 749 aa22.95■■□□□ 1.26
OTUB1-212ENST00000543988 CLCN5P51795 746 aa22.95■■□□□ 1.26
OTUB1-212ENST00000543988 COPB1P53618 953 aaKnown RBP22.95■■□□□ 1.26
OTUB1-212ENST00000543988 STILQ15468 1287 aa22.95■■□□□ 1.26
OTUB1-212ENST00000543988 DENND4CQ5VZ89 1909 aa22.95■■□□□ 1.26
OTUB1-212ENST00000543988 SCD5Q86SK9 330 aa22.95■■□□□ 1.26
OTUB1-212ENST00000543988 BPIFA3Q9BQP9 254 aa22.95■■□□□ 1.26
OTUB1-212ENST00000543988 GKN1Q9NS71 199 aa22.95■■□□□ 1.26
OTUB1-212ENST00000543988 LIMA1Q9UHB6 759 aaKnown RBP22.95■■□□□ 1.26
OTUB1-212ENST00000543988 PIAS3Q9Y6X2 628 aa22.95■■□□□ 1.26
OTUB1-212ENST00000543988 ZNF318Q5VUA4 2279 aa22.94■■□□□ 1.26
OTUB1-212ENST00000543988 LEFTY2O00292 366 aa22.94■■□□□ 1.26
OTUB1-212ENST00000543988 PI15O43692 258 aa22.94■■□□□ 1.26
OTUB1-212ENST00000543988 TLR5O60602 858 aa22.94■■□□□ 1.26
OTUB1-212ENST00000543988 LETM1O95202 739 aaPredicted RBP22.94■■□□□ 1.26
OTUB1-212ENST00000543988 TPM2P07951 284 aa22.94■■□□□ 1.26
OTUB1-212ENST00000543988 PNMA6AP0CW24 399 aaPredicted RBP22.94■■□□□ 1.26
OTUB1-212ENST00000543988 MBL2P11226 248 aaPredicted RBP22.94■■□□□ 1.26
OTUB1-212ENST00000543988 TCF3P15923 654 aa22.94■■□□□ 1.26
OTUB1-212ENST00000543988 AOC1P19801 751 aa22.94■■□□□ 1.26
OTUB1-212ENST00000543988 COL9A1P20849 921 aa22.94■■□□□ 1.26
OTUB1-212ENST00000543988 CD72P21854 359 aa22.94■■□□□ 1.26
OTUB1-212ENST00000543988 AVPR2P30518 371 aa22.94■■□□□ 1.26
OTUB1-212ENST00000543988 USP8P40818 1118 aa22.94■■□□□ 1.26
OTUB1-212ENST00000543988 TKTL1P51854 596 aa22.94■■□□□ 1.26
OTUB1-212ENST00000543988 TRIM68Q6AZZ1 485 aa22.94■■□□□ 1.26
OTUB1-212ENST00000543988 CC2D1AQ6P1N0 951 aaPredicted RBP22.94■■□□□ 1.26
OTUB1-212ENST00000543988 DHX40Q8IX18 779 aaKnown RBP22.94■■□□□ 1.26
OTUB1-212ENST00000543988 TTC8Q8TAM2 541 aa22.94■■□□□ 1.26
OTUB1-212ENST00000543988 CSGALNACT1Q8TDX6 532 aa22.94■■□□□ 1.26
OTUB1-212ENST00000543988 SECISBP2LQ93073 1101 aaKnown RBP22.94■■□□□ 1.26
OTUB1-212ENST00000543988 ZFRQ96KR1 1074 aaKnown RBP22.94■■□□□ 1.26
OTUB1-212ENST00000543988 FAM83CQ9BQN1 747 aa22.94■■□□□ 1.26
OTUB1-212ENST00000543988 HPS4Q9NQG7 708 aa22.94■■□□□ 1.26
OTUB1-212ENST00000543988 GTSE1Q9NYZ3 720 aa22.94■■□□□ 1.26
OTUB1-212ENST00000543988 FHOD1Q9Y613 1164 aa22.94■■□□□ 1.26
OTUB1-212ENST00000543988 WNT6Q9Y6F9 365 aa22.94■■□□□ 1.26
OTUB1-212ENST00000543988 LGALS16A8MUM7 142 aa22.93■■□□□ 1.26
OTUB1-212ENST00000543988 ATP1A3P13637 1013 aa22.93■■□□□ 1.26
OTUB1-212ENST00000543988 ARSAP15289 507 aa22.93■■□□□ 1.26
OTUB1-212ENST00000543988 SOX9P48436 509 aa22.93■■□□□ 1.26
OTUB1-212ENST00000543988 ADIGQ0VDE8 80 aa22.93■■□□□ 1.26
OTUB1-212ENST00000543988 KLHDC7AQ5VTJ3 777 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms