RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 GDF15Q99988 308 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 PDCD2LQ9BRP1 358 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 MTG1Q9BT17 334 aaPredicted RBP6.07□□□□□ -1.44
CPSF7-220ENST00000541963 PITHD1Q9GZP4 211 aaPredicted RBP6.07□□□□□ -1.44
CPSF7-220ENST00000541963 L2HGDHQ9H9P8 463 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 MLXIPQ9HAP2 919 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 KCND1Q9NSA2 647 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 PDRG1Q9NUG6 133 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 COL20A1Q9P218 1284 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 CDY2AQ9Y6F7 541 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 BRCA2P51587 3418 aa6.07□□□□□ -1.44
CPSF7-220ENST00000541963 A0A0G2JNJ9 132 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 MYADML2A6NDP7 307 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 SMCO2A6NFE2 343 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 TCAF2A6NFQ2 919 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 RFXAPO00287 272 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 CPLX1O14810 134 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 KIAA0355O15063 1070 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 CTAGE5O15320 804 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 DAPK3O43293 454 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 ADCY6O43306 1168 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 PRPF3O43395 683 aaKnown RBP6.06□□□□□ -1.44
CPSF7-220ENST00000541963 NDUFS2O75306 463 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 PPFIA4O75335 1185 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 MAFO75444 373 aaPredicted RBP6.06□□□□□ -1.44
CPSF7-220ENST00000541963 FOSP01100 380 aaPredicted RBP6.06□□□□□ -1.44
CPSF7-220ENST00000541963 AKAP5P24588 427 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 GNA11P29992 359 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 ANP32AP39687 249 aaKnown RBP6.06□□□□□ -1.44
CPSF7-220ENST00000541963 MAGEA10P43363 369 aaPredicted RBP6.06□□□□□ -1.44
CPSF7-220ENST00000541963 CDK7P50613 346 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 NAPAP54920 295 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 ADKP55263 362 aaKnown RBP6.06□□□□□ -1.44
CPSF7-220ENST00000541963 NEDD9Q14511 834 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 HLTFQ14527 1009 aaKnown RBP eCLIP6.06□□□□□ -1.44
CPSF7-220ENST00000541963 ANKRD1Q15327 319 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 LY6KQ17RY6 165 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 SLC35G1Q2M3R5 365 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 KANK2Q63ZY3 851 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 CNKSR3Q6P9H4 555 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 TMEM199Q8N511 208 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 OR5AN1Q8NGI8 311 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 CLIP3Q96DZ5 547 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 ZNF274Q96GC6 653 aaPredicted RBP6.06□□□□□ -1.44
CPSF7-220ENST00000541963 FAM84AQ96KN4 292 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 NOX5Q96PH1 765 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 SLC2A13Q96QE2 648 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 PPP1R16BQ96T49 567 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 SYT3Q9BQG1 590 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 ADI1Q9BV57 179 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 KATNAL1Q9BW62 490 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 AGXT2Q9BYV1 514 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 Q9UFV3 132 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 TMPRSS11EQ9UL52 423 aa6.06□□□□□ -1.44
CPSF7-220ENST00000541963 DDX49Q9Y6V7 483 aaKnown RBP6.06□□□□□ -1.44
CPSF7-220ENST00000541963 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.06□□□□□ -1.44
CPSF7-220ENST00000541963 TNRC18O15417 2968 aaPredicted RBP6.05□□□□□ -1.44
CPSF7-220ENST00000541963 ETV2O00321 342 aaPredicted RBP6.05□□□□□ -1.44
CPSF7-220ENST00000541963 MEIS2O14770 477 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 FIBPO43427 364 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 CAND2O75155 1236 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 CDKL5O76039 1030 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 TIMP1P01033 207 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 CPA1P15085 419 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 PDIA3P30101 505 aaKnown RBP6.05□□□□□ -1.44
CPSF7-220ENST00000541963 ICAM3P32942 547 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 THBS2P35442 1172 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 ADCY8P40145 1251 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 ADCY7P51828 1080 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 EVCP57679 992 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 SESN2P58004 480 aaPredicted RBP6.05□□□□□ -1.44
CPSF7-220ENST00000541963 PURAQ00577 322 aaKnown RBP6.05□□□□□ -1.44
CPSF7-220ENST00000541963 TRIM25Q14258 630 aaKnown RBP6.05□□□□□ -1.44
CPSF7-220ENST00000541963 PFKFB3Q16875 520 aaPredicted RBP6.05□□□□□ -1.44
CPSF7-220ENST00000541963 UAP1L1Q3KQV9 507 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 CELF3Q5SZQ8 465 aaKnown RBP6.05□□□□□ -1.44
CPSF7-220ENST00000541963 NFRKBQ6P4R8 1299 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 USP17L6PQ6QN14 398 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 C14orf80Q86SX3 495 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 TPH2Q8IWU9 490 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 TDHQ8IZJ6 230 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 CCDC148Q8NFR7 591 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 PPTC7Q8NI37 304 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 BICD2Q8TD16 824 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 AFG1LQ8WV93 481 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 BADQ92934 168 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 TNPO1Q92973 898 aaKnown RBP6.05□□□□□ -1.44
CPSF7-220ENST00000541963 SPATA33Q96N06 139 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 SENP7Q9BQF6 1050 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 RNF26Q9BY78 433 aaPredicted RBP6.05□□□□□ -1.44
CPSF7-220ENST00000541963 ALDH8A1Q9H2A2 487 aaPredicted RBP6.05□□□□□ -1.44
CPSF7-220ENST00000541963 C6orf50Q9HD87 102 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 GCM1Q9NP62 436 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 RIC8AQ9NPQ8 531 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 POLR3BQ9NW08 1133 aaPredicted RBP6.05□□□□□ -1.44
CPSF7-220ENST00000541963 BARHL2Q9NY43 387 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 RTEL1Q9NZ71 1219 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 CNOT6Q9ULM6 557 aaKnown RBP6.05□□□□□ -1.44
CPSF7-220ENST00000541963 PCDHA6Q9UN73 950 aa6.05□□□□□ -1.44
CPSF7-220ENST00000541963 BAZ2BQ9UIF8 2168 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms