RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 SSRP1Q08945 709 aaKnown RBP10.16□□□□□ -0.78
YBX3-211ENST00000541351 STRN3Q13033 797 aa10.16□□□□□ -0.78
YBX3-211ENST00000541351 NECTIN1Q15223 517 aa10.16□□□□□ -0.78
YBX3-211ENST00000541351 SLC10A6Q3KNW5 377 aa10.16□□□□□ -0.78
YBX3-211ENST00000541351 POTEDQ86YR6 584 aa10.16□□□□□ -0.78
YBX3-211ENST00000541351 ERMNQ8TAM6 284 aa10.16□□□□□ -0.78
YBX3-211ENST00000541351 LEO1Q8WVC0 666 aaPredicted RBP10.16□□□□□ -0.78
YBX3-211ENST00000541351 BSNDQ8WZ55 320 aa10.16□□□□□ -0.78
YBX3-211ENST00000541351 RFFLQ8WZ73 363 aa10.16□□□□□ -0.78
YBX3-211ENST00000541351 CEP295NLQ96MC4 621 aa10.16□□□□□ -0.78
YBX3-211ENST00000541351 XPO6Q96QU8 1125 aaKnown RBP10.16□□□□□ -0.78
YBX3-211ENST00000541351 SLC22A12Q96S37 553 aa10.16□□□□□ -0.78
YBX3-211ENST00000541351 ZDHHC4Q9NPG8 344 aa10.16□□□□□ -0.78
YBX3-211ENST00000541351 ITM2CQ9NQX7 267 aa10.16□□□□□ -0.78
YBX3-211ENST00000541351 USP36Q9P275 1121 aaKnown RBP10.16□□□□□ -0.78
YBX3-211ENST00000541351 ANK1P16157 1881 aa10.15□□□□□ -0.78
YBX3-211ENST00000541351 M0R2N6 131 aa10.15□□□□□ -0.78
YBX3-211ENST00000541351 CLDN3O15551 220 aa10.15□□□□□ -0.78
YBX3-211ENST00000541351 TULP3O75386 442 aa10.15□□□□□ -0.78
YBX3-211ENST00000541351 TADA3O75528 432 aa10.15□□□□□ -0.78
YBX3-211ENST00000541351 EDN1P05305 212 aa10.15□□□□□ -0.78
YBX3-211ENST00000541351 PROZP22891 400 aa10.15□□□□□ -0.78
YBX3-211ENST00000541351 WASP42768 502 aa10.15□□□□□ -0.78
YBX3-211ENST00000541351 MATR3P43243 847 aaKnown RBP eCLIP10.15□□□□□ -0.78
YBX3-211ENST00000541351 SLC7A9P82251 487 aa10.15□□□□□ -0.78
YBX3-211ENST00000541351 CALCRLQ16602 461 aa10.15□□□□□ -0.78
YBX3-211ENST00000541351 GRAMD4Q6IC98 578 aa10.15□□□□□ -0.78
YBX3-211ENST00000541351 RHBDF2Q6PJF5 856 aa10.15□□□□□ -0.78
YBX3-211ENST00000541351 CPLX2Q6PUV4 134 aaKnown RBP10.15□□□□□ -0.78
YBX3-211ENST00000541351 SFTPA1Q8IWL2 248 aa10.15□□□□□ -0.78
YBX3-211ENST00000541351 CD302Q8IX05 232 aa10.15□□□□□ -0.78
YBX3-211ENST00000541351 DCBLD1Q8N8Z6 715 aa10.15□□□□□ -0.78
YBX3-211ENST00000541351 PRCCQ92733 491 aaPredicted RBP10.15□□□□□ -0.78
YBX3-211ENST00000541351 KIFC3Q9BVG8 833 aa10.15□□□□□ -0.78
YBX3-211ENST00000541351 TARS2Q9BW92 718 aaKnown RBP10.15□□□□□ -0.78
YBX3-211ENST00000541351 ACE2Q9BYF1 805 aaPredicted RBP10.15□□□□□ -0.78
YBX3-211ENST00000541351 MAN2B2Q9Y2E5 1009 aa10.15□□□□□ -0.78
YBX3-211ENST00000541351 A0A1B0GTQ1 180 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 C2orf78A6NCI8 922 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 ANTXRLA6NF34 631 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 CYB561D2O14569 222 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 CPLX1O14810 134 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 HOXC11O43248 304 aaPredicted RBP10.14□□□□□ -0.79
YBX3-211ENST00000541351 SYNCRIPO60506 623 aaKnown RBP10.14□□□□□ -0.79
YBX3-211ENST00000541351 PPFIA2O75334 1257 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 ITGB2P05107 769 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 LSSP48449 732 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 ARRB1P49407 418 aaPredicted RBP10.14□□□□□ -0.79
YBX3-211ENST00000541351 TPMTP51580 245 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 GABREP78334 506 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 TLE1Q04724 770 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 ANO4Q32M45 955 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 ZC2HC1CQ53FD0 456 aaPredicted RBP10.14□□□□□ -0.79
YBX3-211ENST00000541351 HS1BP3Q53T59 392 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 LY6G5CQ5SRR4 150 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 KIAA1614Q5VZ46 1190 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 C12orf40Q86WS4 652 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 PHTF2Q8N3S3 785 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 NSUN7Q8NE18 718 aaKnown RBP10.14□□□□□ -0.79
YBX3-211ENST00000541351 C1orf216Q8TAB5 229 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 SIPA1Q96FS4 1042 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 TCEANC2Q96MN5 208 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 PSMG3-AS1Q96PY0 264 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 DEPDC7Q96QD5 511 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 SEMA3CQ99985 751 aa10.14□□□□□ -0.79
YBX3-211ENST00000541351 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.14□□□□□ -0.79
YBX3-211ENST00000541351 MYO18AQ92614 2054 aaKnown RBP10.14□□□□□ -0.79
YBX3-211ENST00000541351 TTC26A0AVF1 554 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 H0Y8X5 98 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 IGLV3-19P01714 112 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 CXCL8P10145 99 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 GSPT1P15170 499 aaKnown RBP10.13□□□□□ -0.79
YBX3-211ENST00000541351 CKMT2P17540 419 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 MUTP22033 750 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 RBMS1P29558 406 aaKnown RBP10.13□□□□□ -0.79
YBX3-211ENST00000541351 CTSKP43235 329 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 TAF6P49848 677 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 FOSBP53539 338 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 DNAJC3Q13217 504 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 ZBTB6Q15916 424 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 DDR2Q16832 855 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 SPATA1Q5VX52 437 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 EGFLAMQ63HQ2 1017 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 KDM7AQ6ZMT4 941 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 ETFBKMTQ8IXQ9 262 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 OXR1Q8N573 874 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 LRRC15Q8TF66 581 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 UCMAQ8WVF2 138 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 FUBP3Q96I24 572 aaKnown RBP eCLIP10.13□□□□□ -0.79
YBX3-211ENST00000541351 ELF4Q99607 663 aaPredicted RBP10.13□□□□□ -0.79
YBX3-211ENST00000541351 LSG1Q9H089 658 aaKnown RBP10.13□□□□□ -0.79
YBX3-211ENST00000541351 POLR1BQ9H9Y6 1135 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 C17orf75Q9HAS0 396 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 TM9SF3Q9HD45 589 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 ANO2Q9NQ90 1003 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 KMT5AQ9NQR1 393 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 CFAP97Q9P2B7 532 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 SH3BP1Q9Y3L3 701 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 CPQQ9Y646 472 aa10.13□□□□□ -0.79
YBX3-211ENST00000541351 KNL1Q8NG31 2342 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms