RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 CSH2P0DML3 217 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 ATP5OP48047 213 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 CNTN2Q02246 1040 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 CAPSQ13938 189 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 RALGPS1Q5JS13 557 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 TRIM72Q6ZMU5 477 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 SH2D5Q6ZV89 423 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 RAPH1Q70E73 1250 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 MCPH1Q8NEM0 835 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 CCDC110Q8TBZ0 833 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 FAF2Q96CS3 445 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 RILPQ96NA2 401 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 CYP4F11Q9HBI6 524 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 SAR1AQ9NR31 198 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 RNF19AQ9NV58 838 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 VWA5AO00534 786 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 WNT10BO00744 389 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 B4GALT5O43286 388 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 PSAPP07602 524 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 APRTP07741 180 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 ZC3H12AQ5D1E8 599 aaKnown RBP10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 DRICH1Q6PGQ1 229 aaPredicted RBP10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 TRAPPC12Q8WVT3 735 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 VPS11Q9H270 941 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 SLC7A8Q9UHI5 535 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 MAD1L1Q9Y6D9 718 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 ADORA2AP29274 412 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 EPHB1P54762 984 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 CDH6P55285 790 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 MCL1Q07820 350 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 KLHL38Q2WGJ6 581 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 VWA5B1Q5TIE3 1220 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 LPCAT4Q643R3 524 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 SCYL2Q6P3W7 929 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 ABHD15Q6UXT9 468 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 SLC44A1Q8WWI5 657 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 VCPIP1Q96JH7 1222 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 TIPINQ9BVW5 301 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 APOL6Q9BWW8 343 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 FOXP3Q9BZS1 431 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 IQCGQ9H095 443 aaKnown RBP10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 SDCBP2Q9H190 292 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 LRCH1Q9Y2L9 728 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 KCNN4O15554 427 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 ITM2AO43736 263 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 CALB1P05937 261 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 C6orf222P0C671 652 aaPredicted RBP10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 SPATA31D3P0C874 917 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 DHRS4L1P0CG22 281 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 CCND2P30279 289 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 RGS7P49802 495 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 RAB27AP51159 221 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 SLC18A1P54219 525 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 C11orf91Q3C1V1 193 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 SPATA31D4Q6ZUB0 917 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 AGR3Q8TD06 166 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 CEP41Q9BYV8 373 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 OCEL1Q9H607 264 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 CNTN3Q9P232 1028 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 STRIP2Q9ULQ0 834 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 TTLL3Q9Y4R7 772 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 ASB3Q9Y575 518 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 ARID2Q68CP9 1835 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 TM9SF1O15321 606 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 MGAMO43451 1857 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 TOM1L1O75674 476 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 RBL1P28749 1068 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 HMGCS2P54868 508 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 YWHAZP63104 245 aaKnown RBP10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 PDE1BQ01064 536 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 PRKG1Q13976 671 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 PIGHQ14442 188 aaPredicted RBP10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 ZNF699Q32M78 642 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 EML3Q32P44 896 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 C1orf146Q5VVC0 180 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 AP1ARQ63HQ0 302 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 CIAPIN1Q6FI81 312 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 RNF111Q6ZNA4 994 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 DENND5BQ6ZUT9 1274 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 BBS12Q6ZW61 710 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 SPNS2Q8IVW8 549 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 ULK2Q8IYT8 1036 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 HACE1Q8IYU2 909 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 DEFB129Q9H1M3 183 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 R3HDMLQ9H3Y0 253 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 SCOCQ9UIL1 159 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 TEX264Q9Y6I9 313 aa10.79□□□□□ -0.68
CDC42SE1-207ENST00000540998 TRIP11Q15643 1979 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 HMX2A2RU54 273 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 E7ENQ6 273 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 MCF2LO15068 1137 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 WDR46O15213 610 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 MAP3K7O43318 606 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 RNASEH1O60930 286 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 FESP07332 822 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 KCNA4P22459 653 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 ASPAP45381 313 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 PGGT1BP53609 377 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 ATXN1P54253 815 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 FKBP1AP62942 108 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms