RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 ZC3H3Q8IXZ2 948 aaKnown RBP13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 FAM186BQ8IYM0 893 aa13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 ENGASEQ8NFI3 743 aa13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 CCDC26Q8TAB7 109 aa13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 SCAMP5Q8TAC9 235 aa13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 TAS1R2Q8TE23 839 aa13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 HNRNPABQ99729 332 aaKnown RBP13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 FAM124BQ9H5Z6 455 aaPredicted RBP13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 APOBEC3GQ9HC16 384 aaKnown RBP13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 MAPK8IP1Q9UQF2 711 aa13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 CPQQ9Y646 472 aa13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 MYO18AQ92614 2054 aaKnown RBP13.9□□□□□ -0.18
SEMA4D-223ENST00000540475 PRR5-ARHGAP8B1AHC4 643 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 HHLA1C9JL84 531 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 K7EQS6 105 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 COCHO43405 550 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 AP1G2O75843 785 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 CHRM1P11229 460 aaPredicted RBP13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 EIF2DP41214 584 aaKnown RBP13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 SLC5A3P53794 718 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 ARHGAP8P85298 464 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 HECTD3Q5T447 861 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 SCARA5Q6ZMJ2 495 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 FILIP1Q7Z7B0 1213 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 ZNF276Q8N554 614 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 C12orf29Q8N999 325 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 SLC2A14Q8TDB8 520 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 WHAMMQ8TF30 809 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 GAB3Q8WWW8 586 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 FBXO32Q969P5 355 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 OTUB2Q96DC9 234 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 CCDC34Q96HJ3 373 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 TWNKQ96RR1 684 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 GDPD2Q9HCC8 539 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 TMEM8AQ9HCN3 771 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 PNPLA8Q9NP80 782 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 HMGXB4Q9UGU5 601 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 EBF1Q9UH73 591 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 CHORDC1Q9UHD1 332 aaPredicted RBP13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 GMEB2Q9UKD1 530 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 RAB23Q9ULC3 237 aa13.89□□□□□ -0.19
SEMA4D-223ENST00000540475 CILPO75339 1184 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 CYP17A1P05093 508 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 TRIM49P0CI25 452 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 TRIM49CP0CI26 452 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 KRT13P13646 458 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 CCDC130P13994 396 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 PIK3CAP42336 1068 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 GCLMP48507 274 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 LMNB2Q03252 620 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 SRSF5Q13243 272 aaKnown RBP13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 DHCR24Q15392 516 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 KRT39Q6A163 491 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 RHBDF2Q6PJF5 856 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 ELOA2Q8IYF1 753 aaPredicted RBP13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 LOXL4Q96JB6 756 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 ZC3H10Q96K80 434 aaKnown RBP13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 TIGD1Q96MW7 591 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 GSDMAQ96QA5 445 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 MED10Q9BTT4 135 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 FBXO44Q9H4M3 255 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 KRT82Q9NSB4 513 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 TBC1D14Q9P2M4 693 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 SLC8A2Q9UPR5 921 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 PLXND1Q9Y4D7 1925 aa13.88□□□□□ -0.19
SEMA4D-223ENST00000540475 GREM1O60565 184 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 ABL1P00519 1130 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 MBL2P11226 248 aaPredicted RBP13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 PRCPP42785 496 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 PGFP49763 221 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 NUCB2P80303 420 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 PNOCQ13519 176 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 CSRP2Q16527 193 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 RSPO4Q2I0M5 234 aaPredicted RBP13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 ZNF658Q5TYW1 1059 aaPredicted RBP13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 HEATR6Q6AI08 1181 aaKnown RBP13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 KLHDC10Q6PID8 442 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 CLEC20AQ6ZU45 233 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 TTC39CQ8N584 583 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 FAM160A2Q8N612 972 aaPredicted RBP13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 RPLP0P6Q8NHW5 317 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 USP33Q8TEY7 942 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 CYFIP2Q96F07 1278 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 NT5C1AQ9BXI3 368 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 IMPG2Q9BZV3 1241 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 NIF3L1Q9GZT8 377 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 CCSER2Q9H7U1 834 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 CYLDQ9NQC7 956 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 RMND1Q9NWS8 449 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 CFAP97Q9P2B7 532 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 SCML2Q9UQR0 700 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 COQ4Q9Y3A0 265 aa13.87□□□□□ -0.19
SEMA4D-223ENST00000540475 NUP205Q92621 2012 aa13.86□□□□□ -0.19
SEMA4D-223ENST00000540475 CETN3O15182 167 aa13.86□□□□□ -0.19
SEMA4D-223ENST00000540475 FOXD2O60548 495 aaPredicted RBP13.86□□□□□ -0.19
SEMA4D-223ENST00000540475 MAP3K7CLP57077 242 aa13.86□□□□□ -0.19
SEMA4D-223ENST00000540475 MRPS21P82921 87 aaKnown RBP13.86□□□□□ -0.19
SEMA4D-223ENST00000540475 SPEM2Q0P670 501 aa13.86□□□□□ -0.19
SEMA4D-223ENST00000540475 ORC1Q13415 861 aa13.86□□□□□ -0.19
SEMA4D-223ENST00000540475 BECN1Q14457 450 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms