RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 DCAF8L1A6NGE4 600 aa21.16■□□□□ 0.98
TMEM260-203ENST00000539559 MEI4A8MW99 385 aa21.16■□□□□ 0.98
TMEM260-203ENST00000539559 MAP3K7O43318 606 aa21.16■□□□□ 0.98
TMEM260-203ENST00000539559 BAG2O95816 211 aa21.16■□□□□ 0.98
TMEM260-203ENST00000539559 PTPN7P35236 360 aa21.16■□□□□ 0.98
TMEM260-203ENST00000539559 ALDH18A1P54886 795 aaKnown RBP21.16■□□□□ 0.98
TMEM260-203ENST00000539559 AP1B1Q10567 949 aa21.16■□□□□ 0.98
TMEM260-203ENST00000539559 BST1Q10588 318 aa21.16■□□□□ 0.98
TMEM260-203ENST00000539559 ZCCHC23Q6ZST2 131 aa21.16■□□□□ 0.98
TMEM260-203ENST00000539559 BBS12Q6ZW61 710 aa21.16■□□□□ 0.98
TMEM260-203ENST00000539559 UBR7Q8N806 425 aa21.16■□□□□ 0.98
TMEM260-203ENST00000539559 SLC44A1Q8WWI5 657 aa21.16■□□□□ 0.98
TMEM260-203ENST00000539559 THTPAQ9BU02 230 aa21.16■□□□□ 0.98
TMEM260-203ENST00000539559 C20orf27Q9GZN8 174 aa21.16■□□□□ 0.98
TMEM260-203ENST00000539559 CNTN3Q9P232 1028 aa21.16■□□□□ 0.98
TMEM260-203ENST00000539559 NXF1Q9UBU9 619 aaKnown RBP21.16■□□□□ 0.98
TMEM260-203ENST00000539559 STYXL1Q9Y6J8 313 aa21.16■□□□□ 0.98
TMEM260-203ENST00000539559 COPEO14579 308 aa21.15■□□□□ 0.98
TMEM260-203ENST00000539559 ASS1P00966 412 aaKnown RBP21.15■□□□□ 0.98
TMEM260-203ENST00000539559 CCND2P30279 289 aa21.15■□□□□ 0.98
TMEM260-203ENST00000539559 OSTNP61366 133 aa21.15■□□□□ 0.98
TMEM260-203ENST00000539559 TMPRSS15P98073 1019 aa21.15■□□□□ 0.98
TMEM260-203ENST00000539559 SP2Q02086 613 aa21.15■□□□□ 0.98
TMEM260-203ENST00000539559 PPFIBP2Q8ND30 876 aa21.15■□□□□ 0.98
TMEM260-203ENST00000539559 IQCGQ9H095 443 aaKnown RBP21.15■□□□□ 0.98
TMEM260-203ENST00000539559 RPAP3Q9H6T3 665 aaPredicted RBP21.15■□□□□ 0.98
TMEM260-203ENST00000539559 POLIQ9UNA4 740 aa21.15■□□□□ 0.98
TMEM260-203ENST00000539559 ARID2Q68CP9 1835 aa21.15■□□□□ 0.98
TMEM260-203ENST00000539559 SNUPNO95149 360 aaKnown RBP21.15■□□□□ 0.98
TMEM260-203ENST00000539559 CALRP27797 417 aaKnown RBP21.15■□□□□ 0.98
TMEM260-203ENST00000539559 PSMC1P62191 440 aaKnown RBP21.15■□□□□ 0.98
TMEM260-203ENST00000539559 CWF19L1Q69YN2 538 aaKnown RBP21.15■□□□□ 0.98
TMEM260-203ENST00000539559 CDR2LQ86X02 465 aaPredicted RBP21.15■□□□□ 0.98
TMEM260-203ENST00000539559 FETUBQ9UGM5 382 aa21.15■□□□□ 0.98
TMEM260-203ENST00000539559 DARS2Q6PI48 645 aaKnown RBP21.14■□□□□ 0.98
TMEM260-203ENST00000539559 C1orf228Q6PIY5 440 aa21.14■□□□□ 0.98
TMEM260-203ENST00000539559 RIPOR1Q6ZS17 1223 aa21.14■□□□□ 0.98
TMEM260-203ENST00000539559 CHSY1Q86X52 802 aa21.14■□□□□ 0.98
TMEM260-203ENST00000539559 IFT43Q96FT9 208 aa21.14■□□□□ 0.98
TMEM260-203ENST00000539559 PANX3Q96QZ0 392 aa21.14■□□□□ 0.98
TMEM260-203ENST00000539559 CDH8P55286 799 aa21.14■□□□□ 0.97
TMEM260-203ENST00000539559 TFAMQ00059 246 aaKnown RBP21.14■□□□□ 0.97
TMEM260-203ENST00000539559 GHRHRQ02643 423 aa21.14■□□□□ 0.97
TMEM260-203ENST00000539559 SLC18A2Q05940 514 aa21.14■□□□□ 0.97
TMEM260-203ENST00000539559 UBAP2LQ14157 1087 aaKnown RBP21.14■□□□□ 0.97
TMEM260-203ENST00000539559 KRT72Q14CN4 511 aa21.14■□□□□ 0.97
TMEM260-203ENST00000539559 CHI3L2Q15782 390 aa21.14■□□□□ 0.97
TMEM260-203ENST00000539559 ZC3H12AQ5D1E8 599 aaKnown RBP21.14■□□□□ 0.97
TMEM260-203ENST00000539559 CFAP61Q8NHU2 1237 aa21.14■□□□□ 0.97
TMEM260-203ENST00000539559 CPXM1Q96SM3 734 aa21.14■□□□□ 0.97
TMEM260-203ENST00000539559 GPRC5DQ9NZD1 345 aa21.14■□□□□ 0.97
TMEM260-203ENST00000539559 ZNF112Q9UJU3 913 aa21.14■□□□□ 0.97
TMEM260-203ENST00000539559 ABLIM1O14639 778 aa21.13■□□□□ 0.97
TMEM260-203ENST00000539559 RAB27AP51159 221 aa21.13■□□□□ 0.97
TMEM260-203ENST00000539559 SMAD1Q15797 465 aaKnown RBP21.13■□□□□ 0.97
TMEM260-203ENST00000539559 LRRC36Q1X8D7 754 aa21.13■□□□□ 0.97
TMEM260-203ENST00000539559 ABHD15Q6UXT9 468 aa21.13■□□□□ 0.97
TMEM260-203ENST00000539559 IZUMO2Q6UXV1 221 aa21.13■□□□□ 0.97
TMEM260-203ENST00000539559 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.13■□□□□ 0.97
TMEM260-203ENST00000539559 ZNF184Q99676 751 aaPredicted RBP21.13■□□□□ 0.97
TMEM260-203ENST00000539559 EBF4Q9BQW3 602 aa21.13■□□□□ 0.97
TMEM260-203ENST00000539559 PICK1Q9NRD5 415 aa21.13■□□□□ 0.97
TMEM260-203ENST00000539559 WDR35Q9P2L0 1181 aa21.13■□□□□ 0.97
TMEM260-203ENST00000539559 TEX264Q9Y6I9 313 aa21.13■□□□□ 0.97
TMEM260-203ENST00000539559 A0A1B0GVG6 124 aa21.13■□□□□ 0.97
TMEM260-203ENST00000539559 MIPP30301 263 aa21.13■□□□□ 0.97
TMEM260-203ENST00000539559 AQP5P55064 265 aa21.13■□□□□ 0.97
TMEM260-203ENST00000539559 RTP1P59025 263 aa21.13■□□□□ 0.97
TMEM260-203ENST00000539559 MRPS5P82675 430 aaKnown RBP21.13■□□□□ 0.97
TMEM260-203ENST00000539559 DPH6Q7L8W6 267 aa21.13■□□□□ 0.97
TMEM260-203ENST00000539559 CCDC110Q8TBZ0 833 aa21.13■□□□□ 0.97
TMEM260-203ENST00000539559 FAF2Q96CS3 445 aa21.13■□□□□ 0.97
TMEM260-203ENST00000539559 WRNIP1Q96S55 665 aa21.13■□□□□ 0.97
TMEM260-203ENST00000539559 TUBB6Q9BUF5 446 aa21.13■□□□□ 0.97
TMEM260-203ENST00000539559 AS3MTQ9HBK9 375 aa21.13■□□□□ 0.97
TMEM260-203ENST00000539559 SMYD2Q9NRG4 433 aa21.13■□□□□ 0.97
TMEM260-203ENST00000539559 MCF2LO15068 1137 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 TGDSO95455 350 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 FSTL1Q12841 308 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 PRAMEF18Q5VWM3 479 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 GPC2Q8N158 579 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 NIPA2Q8N8Q9 360 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 TRPM4Q8TD43 1214 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 GATA6Q92908 595 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 PPM1HQ9ULR3 514 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 ADGRA2Q96PE1 1338 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 PRR5-ARHGAP8B1AHC4 643 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 ARHGAP8P85298 464 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 SCUBE1Q8IWY4 988 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 CCDC33Q8N5R6 958 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 PEBP4Q96S96 227 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 PHACTR1Q9C0D0 580 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 PORCNQ9H237 461 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 RAB6BQ9NRW1 208 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 PCNTO95613 3336 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 CAPN14A8MX76 684 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 LSM8O95777 96 aaKnown RBP21.12■□□□□ 0.97
TMEM260-203ENST00000539559 ERBB2P04626 1255 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 BACE1P56817 501 aa21.12■□□□□ 0.97
TMEM260-203ENST00000539559 SMC1BQ8NDV3 1235 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms