RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 USP20Q9Y2K6 914 aa15.05■□□□□ -0
CACNB1-206ENST00000539338 SLC30A1Q9Y6M5 507 aa15.05■□□□□ -0
CACNB1-206ENST00000539338 GJB1P08034 283 aa15.05■□□□□ -0
CACNB1-206ENST00000539338 IRF1P10914 325 aa15.05■□□□□ -0
CACNB1-206ENST00000539338 VCPP55072 806 aaKnown RBP15.05■□□□□ -0
CACNB1-206ENST00000539338 C1QTNF8P60827 252 aa15.05■□□□□ -0
CACNB1-206ENST00000539338 PLD1Q13393 1074 aa15.05■□□□□ -0
CACNB1-206ENST00000539338 COL9A3Q14050 684 aaPredicted RBP15.05■□□□□ -0
CACNB1-206ENST00000539338 DAB2IPQ5VWQ8 1189 aa15.05■□□□□ -0
CACNB1-206ENST00000539338 SH3RF1Q7Z6J0 888 aa15.05■□□□□ -0
CACNB1-206ENST00000539338 ZNF512Q96ME7 567 aaPredicted RBP15.05■□□□□ -0
CACNB1-206ENST00000539338 V9GYQ6 96 aa15.05■□□□□ -0
CACNB1-206ENST00000539338 CSDE1O75534 798 aaKnown RBP15.05■□□□□ -0
CACNB1-206ENST00000539338 UBOX5O94941 541 aa15.05■□□□□ -0
CACNB1-206ENST00000539338 VDRP11473 427 aa15.05■□□□□ -0
CACNB1-206ENST00000539338 VCAM1P19320 739 aa15.05■□□□□ -0
CACNB1-206ENST00000539338 BMP6P22004 513 aa15.05■□□□□ -0
CACNB1-206ENST00000539338 NDUFV1P49821 464 aa15.05■□□□□ -0
CACNB1-206ENST00000539338 NUDT2P50583 147 aa15.05■□□□□ -0
CACNB1-206ENST00000539338 CCNG2Q16589 344 aa15.05■□□□□ -0
CACNB1-206ENST00000539338 PCYOX1LQ8NBM8 494 aa15.05■□□□□ -0
CACNB1-206ENST00000539338 GLIS3Q8NEA6 775 aa15.05■□□□□ -0
CACNB1-206ENST00000539338 CALML6Q8TD86 181 aa15.05■□□□□ -0
CACNB1-206ENST00000539338 PDCD2LQ9BRP1 358 aa15.05■□□□□ -0
CACNB1-206ENST00000539338 DDX4Q9NQI0 724 aaKnown RBP15.05■□□□□ -0
CACNB1-206ENST00000539338 VTNP04004 478 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 HSPA1AP0DMV8 641 aaKnown RBP15.04■□□□□ -0
CACNB1-206ENST00000539338 HSPA1BP0DMV9 641 aaKnown RBP15.04■□□□□ -0
CACNB1-206ENST00000539338 ACO1P21399 889 aaKnown RBP15.04■□□□□ -0
CACNB1-206ENST00000539338 LBX1P52954 281 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 MGAT5BQ3V5L5 792 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 CREG2Q8IUH2 290 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 MUC3BQ9H195 1237 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 PKD2L2Q9NZM6 624 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 USP18Q9UMW8 372 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 VIL1P09327 827 aaKnown RBP15.04■□□□□ -0
CACNB1-206ENST00000539338 PYGMP11217 842 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 FDFT1P37268 417 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 VHLP40337 213 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 CLEC4FQ8N1N0 589 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 UBQLN1Q9UMX0 589 aaKnown RBP15.04■□□□□ -0
CACNB1-206ENST00000539338 RPL21P46778 160 aaKnown RBP15.04■□□□□ -0
CACNB1-206ENST00000539338 TWF1Q12792 350 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 MFN1Q8IWA4 741 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 DCUN1D1Q96GG9 259 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 VTA1Q9NP79 307 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 KANSL3Q9P2N6 904 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 NAALADL1Q9UQQ1 740 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 BCL9O00512 1426 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 ZNF197O14709 1029 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 ZSCAN9O15535 394 aaPredicted RBP15.04■□□□□ -0
CACNB1-206ENST00000539338 RIPK2O43353 540 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 GAS2O43903 313 aaKnown RBP15.04■□□□□ -0
CACNB1-206ENST00000539338 SKAP2O75563 359 aaPredicted RBP15.04■□□□□ -0
CACNB1-206ENST00000539338 OR1G1P47890 313 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 HDAC4P56524 1084 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 BTKQ06187 659 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 FLOT2Q14254 428 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 MTDHQ86UE4 582 aaKnown RBP15.04■□□□□ -0
CACNB1-206ENST00000539338 FBXO16Q8IX29 292 aaPredicted RBP15.04■□□□□ -0
CACNB1-206ENST00000539338 TEX9Q8N6V9 391 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 ACTL9Q8TC94 416 aa15.04■□□□□ -0
CACNB1-206ENST00000539338 PRPF4O43172 522 aaKnown RBP eCLIP15.03■□□□□ -0
CACNB1-206ENST00000539338 NUMBP49757 651 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 RARRES1P49788 294 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 CREMQ03060 361 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 MEA1Q16626 185 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 CEP68Q76N32 757 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 TMC3Q7Z5M5 1100 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 MCOLN2Q8IZK6 566 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 WDCPQ9H6R7 721 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 DDX20Q9UHI6 824 aaKnown RBP15.03■□□□□ -0
CACNB1-206ENST00000539338 SH3BP1Q9Y3L3 701 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 PKP3Q9Y446 797 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 EML1O00423 815 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 MTSS1O43312 755 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 CYP2C8P10632 490 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 PRKAR2AP13861 404 aaKnown RBP15.03■□□□□ -0
CACNB1-206ENST00000539338 VGLL2Q8N8G2 317 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 AENQ8WTP8 325 aaKnown RBP15.03■□□□□ -0
CACNB1-206ENST00000539338 THAP11Q96EK4 314 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 L3MBTL3Q96JM7 780 aaPredicted RBP15.03■□□□□ -0
CACNB1-206ENST00000539338 APOL2Q9BQE5 337 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 KCTD10Q9H3F6 313 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 CCDC134Q9H6E4 229 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 ZNF212Q9UDV6 495 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 SUFUQ9UMX1 484 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 HIST1H2AGP0C0S8 130 aaPredicted RBP15.03■□□□□ -0
CACNB1-206ENST00000539338 HIST1H2ADP20671 130 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 ARL4DP49703 201 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 ZNF844Q08AG5 666 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 BMPR2Q13873 1038 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 OTOP1Q7RTM1 612 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 PRUNE1Q86TP1 453 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 CHSY1Q86X52 802 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 FAM131BQ86XD5 332 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 FIBCD1Q8N539 461 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 FBXO22Q8NEZ5 403 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 HIST1H2AHQ96KK5 128 aa15.03■□□□□ -0
CACNB1-206ENST00000539338 HIST1H2AJQ99878 128 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms