RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 C2CD2Q9Y426 696 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 TCHHQ07283 1943 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 IGKV6-21A0A0C4DH24 114 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 GOLGA8MH3BSY2 632 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 IKBKBO14920 756 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 ZMYND10O75800 440 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 BEST1O76090 585 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 ZBED1O96006 694 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 RHOP08100 348 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 ZNF131P52739 623 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 AP1B1Q10567 949 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 MAPRE1Q15691 268 aaKnown RBP7.58□□□□□ -1.2
MSH6-209ENST00000538136 ATP13A4Q4VNC1 1196 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 PRAMEF14Q5SWL7 426 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 HYIQ5T013 277 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 LINGO4Q6UY18 593 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 LGI2Q8N0V4 545 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 SPPL3Q8TCT6 385 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 KREMEN1Q96MU8 473 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 NTPCRQ9BSD7 190 aaKnown RBP7.58□□□□□ -1.2
MSH6-209ENST00000538136 SVILO95425 2214 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 TTC3P53804 2025 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 KPNA3O00505 521 aaPredicted RBP7.57□□□□□ -1.2
MSH6-209ENST00000538136 ASS1P00966 412 aaKnown RBP7.57□□□□□ -1.2
MSH6-209ENST00000538136 RPL9P32969 192 aaKnown RBP7.57□□□□□ -1.2
MSH6-209ENST00000538136 ZNF445P59923 1031 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 ARL13BQ3SXY8 428 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 HECTD3Q5T447 861 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 FAXCQ5TGI0 409 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 PMF1Q6P1K2 205 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 ITIH5Q86UX2 942 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 CCDC105Q8IYK2 499 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.57□□□□□ -1.2
MSH6-209ENST00000538136 ZSCAN18Q8TBC5 510 aaPredicted RBP7.57□□□□□ -1.2
MSH6-209ENST00000538136 BCL7CQ8WUZ0 217 aaPredicted RBP7.57□□□□□ -1.2
MSH6-209ENST00000538136 KLK6Q92876 244 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 CCDC51Q96ER9 411 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 FBXL18Q96ME1 805 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 PLEKHA5Q9HAU0 1116 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 ZFP14Q9HCL3 533 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 SAE1Q9UBE0 346 aaPredicted RBP7.57□□□□□ -1.2
MSH6-209ENST00000538136 ASIC3Q9UHC3 531 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 PLA2G4CQ9UP65 541 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.57□□□□□ -1.2
MSH6-209ENST00000538136 CHD8Q9HCK8 2581 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 RP1P56715 2156 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 MYH9P35579 1960 aaKnown RBP7.57□□□□□ -1.2
MSH6-209ENST00000538136 ARFGEF1Q9Y6D6 1849 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 FAM86C2PA6NEL3 165 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 BUB1BO60566 1050 aaPredicted RBP7.57□□□□□ -1.2
MSH6-209ENST00000538136 SOD2P04179 222 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 KRT10P13645 584 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 NPR3P17342 541 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 FSHRP23945 695 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 ATP5C1P36542 298 aaKnown RBP7.57□□□□□ -1.2
MSH6-209ENST00000538136 AP3M2P53677 418 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 HOOK3Q86VS8 718 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 ITFG1Q8TB96 612 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 ZNF564Q8TBZ8 553 aaPredicted RBP7.57□□□□□ -1.2
MSH6-209ENST00000538136 NCAPGQ9BPX3 1015 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 STK33Q9BYT3 514 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 DSEQ9UL01 958 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 SEC16AO15027 2179 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 RNF225M0QZC1 329 aaPredicted RBP7.57□□□□□ -1.2
MSH6-209ENST00000538136 KIAA0391O15091 583 aaKnown RBP7.57□□□□□ -1.2
MSH6-209ENST00000538136 VNN1O95497 513 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 BCAT1P54687 386 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 RPS6KA1Q15418 735 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 UPP1Q16831 310 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 B3GNT9Q6UX72 402 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 IRF2BP1Q8IU81 584 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 TMTC1Q8IUR5 882 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 NUP93Q8N1F7 819 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 ZNF461Q8TAF7 563 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 FEZF2Q8TBJ5 459 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 FAM172AQ8WUF8 416 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 SDCBP2Q9H190 292 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 TLR8Q9NR97 1041 aaKnown RBP7.57□□□□□ -1.2
MSH6-209ENST00000538136 PYCARDQ9ULZ3 195 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 STXBP5LQ9Y2K9 1186 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 CACNA1IQ9P0X4 2223 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 PHIPQ8WWQ0 1821 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 C2orf78A6NCI8 922 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 YJEFN3A6XGL0 299 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 E7ENQ6 273 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 AP5Z1O43299 807 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 TBC1D4O60343 1298 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 GYPCP04921 128 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 VDRP11473 427 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 PTPN2P17706 415 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 MAT2AP31153 395 aaKnown RBP7.57□□□□□ -1.2
MSH6-209ENST00000538136 TIE1P35590 1138 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 CSE1LP55060 971 aaKnown RBP7.57□□□□□ -1.2
MSH6-209ENST00000538136 TPI1P60174 286 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 RPL7AP62424 266 aaKnown RBP7.57□□□□□ -1.2
MSH6-209ENST00000538136 SEL1L2Q5TEA6 688 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 ANO7Q6IWH7 933 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 SERPINA13PQ6UXR4 307 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 HFE2Q6ZVN8 426 aa7.57□□□□□ -1.2
MSH6-209ENST00000538136 VSTM4Q8IW00 320 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms