RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 PDGFRAP16234 1089 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 SDC4P31431 198 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 OR1D2P34982 312 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 FLT3P36888 993 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 PTPN9P43378 593 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 SLC5A3P53794 718 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 RPL10AP62906 217 aaKnown RBP12.94□□□□□ -0.34
DDB1-209ENST00000537877 UBE3AQ05086 875 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 CKAP4Q07065 602 aaKnown RBP12.94□□□□□ -0.34
DDB1-209ENST00000537877 PTPROQ16827 1216 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 LRRC38Q5VT99 294 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 PM20D1Q6GTS8 502 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 RHOT1Q8IXI2 618 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 KLHL23Q8NBE8 558 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 ATAD1Q8NBU5 361 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 CLEC4CQ8WTT0 213 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 RXFP2Q8WXD0 754 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 KHSRPQ92945 711 aaKnown RBP eCLIP12.94□□□□□ -0.34
DDB1-209ENST00000537877 FAM149B1Q96BN6 582 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 SPATA17Q96L03 361 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 PGLYRP2Q96PD5 576 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 CLSTN3Q9BQT9 956 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 MAFFQ9ULX9 164 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 PCDHA3Q9Y5H8 950 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 USP3Q9Y6I4 520 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 MYO16Q9Y6X6 1858 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 C5orf67F2Z3F1 127 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 TNFRSF10BO14763 440 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 ADAM12O43184 909 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 GRAP2O75791 330 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 ABLIM3O94929 683 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 VNN2O95498 520 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 LTFP02788 710 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 RB1P06400 928 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 RPL17P18621 184 aaKnown RBP12.94□□□□□ -0.34
DDB1-209ENST00000537877 PCK1P35558 622 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 NDUFV1P49821 464 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 DNA2P51530 1060 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 CDR1P51861 262 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 RNASE9P60153 205 aaKnown RBP12.94□□□□□ -0.34
DDB1-209ENST00000537877 YWHAZP63104 245 aaKnown RBP12.94□□□□□ -0.34
DDB1-209ENST00000537877 RAB33AQ14088 237 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 SHHQ15465 462 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 CLUL1Q15846 466 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 MGAT5BQ3V5L5 792 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 TRNP1Q6NT89 227 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 CC2D1AQ6P1N0 951 aaPredicted RBP12.94□□□□□ -0.34
DDB1-209ENST00000537877 POLNQ7Z5Q5 900 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 NUP93Q8N1F7 819 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 CEP112Q8N8E3 955 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 ZNF461Q8TAF7 563 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 GOLGA1Q92805 767 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 SLC2A13Q96QE2 648 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 PSMB7Q99436 277 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 DDX23Q9BUQ8 820 aaKnown RBP12.94□□□□□ -0.34
DDB1-209ENST00000537877 FBXO44Q9H4M3 255 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 POPDC2Q9HBU9 364 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 RXFP1Q9HBX9 757 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 COMMD8Q9NX08 183 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.94□□□□□ -0.34
DDB1-209ENST00000537877 STAP1Q9ULZ2 295 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 USTQ9Y2C2 406 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 PCDHA11Q9Y5I1 949 aa12.94□□□□□ -0.34
DDB1-209ENST00000537877 GBF1Q92538 1859 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 RIOK3O14730 519 aaKnown RBP12.93□□□□□ -0.34
DDB1-209ENST00000537877 LILRB3O75022 631 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 SRGAP2O75044 1071 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 LRCH4O75427 683 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 RTN3O95197 1032 aaPredicted RBP12.93□□□□□ -0.34
DDB1-209ENST00000537877 USP17L7P0C7H9 530 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 ATF2P15336 505 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 DNAJB2P25686 324 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 CXCR5P32302 372 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 NOS2P35228 1153 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 MATKP42679 507 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 TUFMP49411 452 aaKnown RBP12.93□□□□□ -0.34
DDB1-209ENST00000537877 PEX5P50542 639 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 RABGGTBP53611 331 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 RWDD2BP57060 319 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 TAF5Q15542 800 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 HADHQ16836 314 aaKnown RBP12.93□□□□□ -0.34
DDB1-209ENST00000537877 CCDC181Q5TID7 509 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 BEND5Q7L4P6 421 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 BHLHA9Q7RTU4 235 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 CPNE8Q86YQ8 564 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 TTC9BQ8N6N2 239 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 MNS1Q8NEH6 495 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 COG1Q8WTW3 980 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 ALG3Q92685 438 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 KRT35Q92764 455 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 SEPT5Q99719 369 aaPredicted RBP12.93□□□□□ -0.34
DDB1-209ENST00000537877 GDF15Q99988 308 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 C11orf84Q9BUA3 381 aaPredicted RBP12.93□□□□□ -0.34
DDB1-209ENST00000537877 RRN3Q9NYV6 651 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 IL37Q9NZH6 218 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 IRAK3Q9Y616 596 aa12.93□□□□□ -0.34
DDB1-209ENST00000537877 FAM92AA1XBS5 289 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 YJEFN3A6XGL0 299 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 E7ENQ6 273 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 SLU7O95391 586 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms