RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 RAP1GAPP47736 663 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 SLC5A3P53794 718 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 ATXN3P54252 364 aaPredicted RBP14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 USP46P62068 366 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 CCDC142Q17RM4 750 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 PLK5Q496M5 336 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 PKN3Q6P5Z2 889 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 INTS8Q75QN2 995 aaKnown RBP14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 LPCAT2Q7L5N7 544 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 SLC9A9Q8IVB4 645 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 TTC39CQ8N584 583 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 PARD3BQ8TEW8 1205 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 USP33Q8TEY7 942 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 PAGE5Q96GU1 130 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 CNOT6LQ96LI5 555 aaKnown RBP14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 CDK5RAP1Q96SZ6 601 aaKnown RBP14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 B3GNT5Q9BYG0 378 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 DPEP3Q9H4B8 488 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 SMYD3Q9H7B4 428 aa14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 CHORDC1Q9UHD1 332 aaPredicted RBP14.03□□□□□ -0.16
CLSTN3-205ENST00000535452 ZNF292O60281 2723 aa14.02□□□□□ -0.16
CLSTN3-205ENST00000535452 GOLGA6L4A6NEF3 574 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 LRRIQ3A6PVS8 624 aaPredicted RBP14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 CLDN5O00501 218 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 OAS1P00973 400 aaKnown RBP14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 CYP17A1P05093 508 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 CMA1P23946 247 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 CASP1P29466 404 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 HOXD13P35453 343 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 TIE1P35590 1138 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 ATP5C1P36542 298 aaKnown RBP14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 TNFRSF4P43489 277 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 DHPSP49366 369 aaPredicted RBP14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 CASP4P49662 377 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 CDH8P55286 799 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 DNM1Q05193 864 aaKnown RBP14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 SF3A2Q15428 464 aaKnown RBP14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 CCDC6Q16204 474 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 CRY1Q16526 586 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 KMT5BQ4FZB7 885 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 WDR44Q5JSH3 913 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 STPG1Q5TH74 334 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 ACOT1Q86TX2 421 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 ADGRG2Q8IZP9 1017 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 CCDC33Q8N5R6 958 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 TMC2Q8TDI7 906 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 KCNV2Q8TDN2 545 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 EDEM2Q9BV94 578 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 NUSAP1Q9BXS6 441 aaKnown RBP14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 TPSD1Q9BZJ3 242 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 SCAND2PQ9GZW5 306 aaPredicted RBP14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 FBRSL1Q9HCM7 1045 aaKnown RBP14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 C2orf42Q9NWW7 574 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 RCOR1Q9UKL0 485 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 VPS13AQ96RL7 3174 aa14.02□□□□□ -0.17
CLSTN3-205ENST00000535452 KLF8O95600 359 aaPredicted RBP14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 OLFM2O95897 454 aa14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 IRF1P10914 325 aa14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 RALAP11233 206 aa14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 PFKFB1P16118 471 aa14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 NR2F2P24468 414 aa14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 RDXP35241 583 aaKnown RBP14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 PSEN1P49768 467 aa14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 VAMP7P51809 220 aa14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 KDSRQ06136 332 aa14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 EHHADHQ08426 723 aa14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 LMAN2Q12907 356 aa14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 RABEPKQ7Z6M1 372 aa14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 TXNDC5Q8NBS9 432 aaKnown RBP14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 SLC2A14Q8TDB8 520 aa14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 KCNK16Q96T55 309 aa14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 NT5C1AQ9BXI3 368 aa14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 RNF38Q9H0F5 515 aa14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 CYP3A43Q9HB55 503 aa14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 WDR35Q9P2L0 1181 aa14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 HOOK1Q9UJC3 728 aaKnown RBP14.01□□□□□ -0.17
CLSTN3-205ENST00000535452 A0A1B0GVL5 298 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 COCHO43405 550 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 GDF9O60383 454 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 TLR5O60602 858 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 ADORA2BP29275 332 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 PSMC2P35998 433 aaKnown RBP14□□□□□ -0.17
CLSTN3-205ENST00000535452 OPRD1P41143 372 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 NDST1P52848 882 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 MAP3K7CLP57077 242 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 STK4Q13043 487 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 LY6G5CQ5SRR4 150 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 C10orf76Q5T2E6 689 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 GRAMD4Q6IC98 578 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 GRAMD1CQ8IYS0 662 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 ALLCQ8N6M5 410 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 ZNF513Q8N8E2 541 aaPredicted RBP14□□□□□ -0.17
CLSTN3-205ENST00000535452 RIN3Q8TB24 985 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 ZNF516Q92618 1163 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 JAKMIP2Q96AA8 810 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 TSG101Q99816 390 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 XYLT2Q9H1B5 865 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 DUSP15Q9H1R2 295 aaPredicted RBP14□□□□□ -0.17
CLSTN3-205ENST00000535452 MMRN2Q9H8L6 949 aa14□□□□□ -0.17
CLSTN3-205ENST00000535452 FAM49BQ9NUQ9 324 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms