RNA–Protein interactions for RNA: ENST00000533943.1

MRPL49-208, Transcript of mitochondrial ribosomal protein L49, humanhuman

TSL 3

Gene MRPL49, Length 688 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-208ENST00000533943 OBSL1O75147 1896 aa17.04■□□□□ 0.32
MRPL49-208ENST00000533943 HHLA1C9JL84 531 aa17.04■□□□□ 0.32
MRPL49-208ENST00000533943 LEFTY2O00292 366 aa17.04■□□□□ 0.32
MRPL49-208ENST00000533943 TBXAS1P24557 533 aaPredicted RBP17.04■□□□□ 0.32
MRPL49-208ENST00000533943 IFNAR2P48551 515 aa17.04■□□□□ 0.32
MRPL49-208ENST00000533943 YWHAEP62258 255 aaKnown RBP17.04■□□□□ 0.32
MRPL49-208ENST00000533943 CETN1Q12798 172 aa17.04■□□□□ 0.32
MRPL49-208ENST00000533943 EML3Q32P44 896 aa17.04■□□□□ 0.32
MRPL49-208ENST00000533943 DGKKQ5KSL6 1271 aa17.04■□□□□ 0.32
MRPL49-208ENST00000533943 PPP1R26Q5T8A7 1209 aaPredicted RBP17.04■□□□□ 0.32
MRPL49-208ENST00000533943 CPA6Q8N4T0 437 aa17.04■□□□□ 0.32
MRPL49-208ENST00000533943 ATP2A3Q93084 1043 aa17.04■□□□□ 0.32
MRPL49-208ENST00000533943 CLSTN2Q9H4D0 955 aa17.04■□□□□ 0.32
MRPL49-208ENST00000533943 ECT2Q9H8V3 914 aa17.04■□□□□ 0.32
MRPL49-208ENST00000533943 GMIPQ9P107 970 aa17.04■□□□□ 0.32
MRPL49-208ENST00000533943 RWDD2AQ9UIY3 292 aa17.04■□□□□ 0.32
MRPL49-208ENST00000533943 SCML2Q9UQR0 700 aa17.04■□□□□ 0.32
MRPL49-208ENST00000533943 CPQQ9Y646 472 aa17.04■□□□□ 0.32
MRPL49-208ENST00000533943 WNT6Q9Y6F9 365 aa17.04■□□□□ 0.32
MRPL49-208ENST00000533943 DMDP11532 3685 aa17.03■□□□□ 0.32
MRPL49-208ENST00000533943 USP34Q70CQ2 3546 aa17.03■□□□□ 0.32
MRPL49-208ENST00000533943 COCHO43405 550 aa17.03■□□□□ 0.32
MRPL49-208ENST00000533943 CCINQ13939 588 aa17.03■□□□□ 0.32
MRPL49-208ENST00000533943 PON2Q15165 354 aa17.03■□□□□ 0.32
MRPL49-208ENST00000533943 ARHGAP17Q68EM7 881 aa17.03■□□□□ 0.32
MRPL49-208ENST00000533943 GPRIN1Q7Z2K8 1008 aa17.03■□□□□ 0.32
MRPL49-208ENST00000533943 DDX42Q86XP3 938 aaKnown RBP eCLIP17.03■□□□□ 0.32
MRPL49-208ENST00000533943 SYNPOQ8N3V7 929 aa17.03■□□□□ 0.32
MRPL49-208ENST00000533943 MLKLQ8NB16 471 aa17.03■□□□□ 0.32
MRPL49-208ENST00000533943 TTC16Q8NEE8 873 aa17.03■□□□□ 0.32
MRPL49-208ENST00000533943 CHFRQ96EP1 664 aa17.03■□□□□ 0.32
MRPL49-208ENST00000533943 NT5C1BQ96P26 610 aa17.03■□□□□ 0.32
MRPL49-208ENST00000533943 PRMT8Q9NR22 394 aaPredicted RBP17.03■□□□□ 0.32
MRPL49-208ENST00000533943 SMPD4Q9NXE4 827 aa17.03■□□□□ 0.32
MRPL49-208ENST00000533943 MIA3Q5JRA6 1907 aa17.02■□□□□ 0.32
MRPL49-208ENST00000533943 KIF26AQ9ULI4 1882 aaPredicted RBP17.02■□□□□ 0.32
MRPL49-208ENST00000533943 TRDMT1O14717 391 aaKnown RBP17.02■□□□□ 0.32
MRPL49-208ENST00000533943 CCDC192P0DO97 292 aa17.02■□□□□ 0.32
MRPL49-208ENST00000533943 MBL2P11226 248 aaPredicted RBP17.02■□□□□ 0.32
MRPL49-208ENST00000533943 GJA4P35212 333 aa17.02■□□□□ 0.32
MRPL49-208ENST00000533943 KIF11P52732 1056 aa17.02■□□□□ 0.32
MRPL49-208ENST00000533943 KCNH2Q12809 1159 aa17.02■□□□□ 0.32
MRPL49-208ENST00000533943 LRMPQ12912 555 aa17.02■□□□□ 0.32
MRPL49-208ENST00000533943 NR1H3Q13133 447 aa17.02■□□□□ 0.32
MRPL49-208ENST00000533943 TMEM196Q5HYL7 178 aa17.02■□□□□ 0.32
MRPL49-208ENST00000533943 UBR7Q8N806 425 aa17.02■□□□□ 0.32
MRPL49-208ENST00000533943 LMO3Q8TAP4 145 aa17.02■□□□□ 0.32
MRPL49-208ENST00000533943 NKD2Q969F2 451 aaPredicted RBP17.02■□□□□ 0.32
MRPL49-208ENST00000533943 UBXN6Q9BZV1 441 aa17.02■□□□□ 0.32
MRPL49-208ENST00000533943 LINC00597Q9H2U6 94 aa17.02■□□□□ 0.32
MRPL49-208ENST00000533943 SEMA4AQ9H3S1 761 aa17.02■□□□□ 0.32
MRPL49-208ENST00000533943 TLR8Q9NR97 1041 aaKnown RBP17.02■□□□□ 0.32
MRPL49-208ENST00000533943 RBM12Q9NTZ6 932 aaKnown RBP17.02■□□□□ 0.32
MRPL49-208ENST00000533943 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.02■□□□□ 0.32
MRPL49-208ENST00000533943 ANAPC1Q9H1A4 1944 aa17.02■□□□□ 0.31
MRPL49-208ENST00000533943 SLC9A3R1O14745 358 aaPredicted RBP17.01■□□□□ 0.31
MRPL49-208ENST00000533943 GFRA3O60609 400 aa17.01■□□□□ 0.31
MRPL49-208ENST00000533943 NFATC1O95644 943 aa17.01■□□□□ 0.31
MRPL49-208ENST00000533943 AFPP02771 609 aaKnown RBP17.01■□□□□ 0.31
MRPL49-208ENST00000533943 ACO1P21399 889 aaKnown RBP17.01■□□□□ 0.31
MRPL49-208ENST00000533943 PGFP49763 221 aa17.01■□□□□ 0.31
MRPL49-208ENST00000533943 CCR3P51677 355 aa17.01■□□□□ 0.31
MRPL49-208ENST00000533943 CSTF1Q05048 431 aaKnown RBP17.01■□□□□ 0.31
MRPL49-208ENST00000533943 GRSF1Q12849 480 aaKnown RBP eCLIP17.01■□□□□ 0.31
MRPL49-208ENST00000533943 GAS6Q14393 721 aa17.01■□□□□ 0.31
MRPL49-208ENST00000533943 ZC3H14Q6PJT7 736 aaKnown RBP17.01■□□□□ 0.31
MRPL49-208ENST00000533943 SPEM1Q8N4L4 309 aa17.01■□□□□ 0.31
MRPL49-208ENST00000533943 ANKRD52Q8NB46 1076 aa17.01■□□□□ 0.31
MRPL49-208ENST00000533943 EHBP1Q8NDI1 1231 aa17.01■□□□□ 0.31
MRPL49-208ENST00000533943 NELL1Q92832 810 aa17.01■□□□□ 0.31
MRPL49-208ENST00000533943 EXOC4Q96A65 974 aa17.01■□□□□ 0.31
MRPL49-208ENST00000533943 JAKMIP2Q96AA8 810 aa17.01■□□□□ 0.31
MRPL49-208ENST00000533943 ZFRQ96KR1 1074 aaKnown RBP17.01■□□□□ 0.31
MRPL49-208ENST00000533943 CCSER2Q9H7U1 834 aa17.01■□□□□ 0.31
MRPL49-208ENST00000533943 LMBRD1Q9NUN5 540 aa17.01■□□□□ 0.31
MRPL49-208ENST00000533943 CFAP97Q9P2B7 532 aa17.01■□□□□ 0.31
MRPL49-208ENST00000533943 KIAA1257Q9ULG3 409 aa17.01■□□□□ 0.31
MRPL49-208ENST00000533943 USP3Q9Y6I4 520 aa17.01■□□□□ 0.31
MRPL49-208ENST00000533943 CACNA1IQ9P0X4 2223 aa17.01■□□□□ 0.31
MRPL49-208ENST00000533943 E2F8A0AVK6 867 aa17■□□□□ 0.31
MRPL49-208ENST00000533943 PRR23AA6NEV1 266 aa17■□□□□ 0.31
MRPL49-208ENST00000533943 CYP26A1O43174 497 aa17■□□□□ 0.31
MRPL49-208ENST00000533943 TLR5O60602 858 aa17■□□□□ 0.31
MRPL49-208ENST00000533943 SLC8A3P57103 927 aa17■□□□□ 0.31
MRPL49-208ENST00000533943 PPP2R5DQ14738 602 aa17■□□□□ 0.31
MRPL49-208ENST00000533943 FSTL4Q6MZW2 842 aa17■□□□□ 0.31
MRPL49-208ENST00000533943 CCDC186Q7Z3E2 898 aa17■□□□□ 0.31
MRPL49-208ENST00000533943 MED15Q96RN5 788 aa17■□□□□ 0.31
MRPL49-208ENST00000533943 FAM126AQ9BYI3 521 aaPredicted RBP17■□□□□ 0.31
MRPL49-208ENST00000533943 NUP62CLQ9H1M0 184 aa17■□□□□ 0.31
MRPL49-208ENST00000533943 CYLDQ9NQC7 956 aa17■□□□□ 0.31
MRPL49-208ENST00000533943 R4GN57 208 aa17■□□□□ 0.31
MRPL49-208ENST00000533943 ZFHX2Q9C0A1 2572 aaPredicted RBP17■□□□□ 0.31
MRPL49-208ENST00000533943 VDRP11473 427 aa16.99■□□□□ 0.31
MRPL49-208ENST00000533943 TDGF1P13385 188 aa16.99■□□□□ 0.31
MRPL49-208ENST00000533943 DRD1P21728 446 aa16.99■□□□□ 0.31
MRPL49-208ENST00000533943 CXCL12P48061 93 aa16.99■□□□□ 0.31
MRPL49-208ENST00000533943 PSEN1P49768 467 aa16.99■□□□□ 0.31
MRPL49-208ENST00000533943 GALK1P51570 392 aa16.99■□□□□ 0.31
MRPL49-208ENST00000533943 GCNT1Q02742 428 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms