RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 TRDMT1O14717 391 aaKnown RBP11.05□□□□□ -0.64
CAPN1-225ENST00000533704 PSMA7O14818 248 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 RNF40O75150 1001 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 GADD45BO75293 160 aaPredicted RBP11.05□□□□□ -0.64
CAPN1-225ENST00000533704 NFATC1O95644 943 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 OAS1P00973 400 aaKnown RBP11.05□□□□□ -0.64
CAPN1-225ENST00000533704 IRF1P10914 325 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 TDGF1P13385 188 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 PFKLP17858 780 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 HOXC13P31276 330 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 GTF2H1P32780 548 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 PMS1P54277 932 aaKnown RBP11.05□□□□□ -0.64
CAPN1-225ENST00000533704 SLC7A9P82251 487 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 ZXDBP98169 803 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 ENPEPQ07075 957 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 DMWDQ09019 674 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 INCA1Q0VD86 236 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 TMEM196Q5HYL7 178 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 HECTD3Q5T447 861 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 PKN3Q6P5Z2 889 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 FILIP1Q7Z7B0 1213 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 CRYBG2Q8N1P7 616 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 SYNPOQ8N3V7 929 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 SUMF1Q8NBK3 374 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 FBXL13Q8NEE6 735 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 ZMIZ2Q8NF64 920 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 RUBCNQ92622 972 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 CD101Q93033 1021 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 EXOC4Q96A65 974 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 TIGD1Q96MW7 591 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 FAM126AQ9BYI3 521 aaPredicted RBP11.05□□□□□ -0.64
CAPN1-225ENST00000533704 CCSER2Q9H7U1 834 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 FBRSL1Q9HCM7 1045 aaKnown RBP11.05□□□□□ -0.64
CAPN1-225ENST00000533704 MAN1B1Q9UKM7 699 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 RAB23Q9ULC3 237 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 CEP250Q9BV73 2442 aa11.05□□□□□ -0.64
CAPN1-225ENST00000533704 TNFRSF10BO14763 440 aa11.04□□□□□ -0.64
CAPN1-225ENST00000533704 SLC16A3O15427 465 aaKnown RBP11.04□□□□□ -0.64
CAPN1-225ENST00000533704 COCHO43405 550 aa11.04□□□□□ -0.64
CAPN1-225ENST00000533704 LILRB5O75023 590 aa11.04□□□□□ -0.64
CAPN1-225ENST00000533704 CILPO75339 1184 aa11.04□□□□□ -0.64
CAPN1-225ENST00000533704 TCF3P15923 654 aa11.04□□□□□ -0.64
CAPN1-225ENST00000533704 DRD1P21728 446 aa11.04□□□□□ -0.64
CAPN1-225ENST00000533704 PXNP49023 591 aaPredicted RBP11.04□□□□□ -0.64
CAPN1-225ENST00000533704 FKBP3Q00688 224 aaKnown RBP11.04□□□□□ -0.64
CAPN1-225ENST00000533704 LRMPQ12912 555 aa11.04□□□□□ -0.64
CAPN1-225ENST00000533704 SRSF5Q13243 272 aaKnown RBP11.04□□□□□ -0.64
CAPN1-225ENST00000533704 CCDC40Q4G0X9 1142 aa11.04□□□□□ -0.64
CAPN1-225ENST00000533704 MAMSTRQ6ZN01 415 aa11.04□□□□□ -0.64
CAPN1-225ENST00000533704 GPRIN1Q7Z2K8 1008 aa11.04□□□□□ -0.64
CAPN1-225ENST00000533704 WHAMMQ8TF30 809 aa11.04□□□□□ -0.64
CAPN1-225ENST00000533704 OVCA2Q8WZ82 227 aa11.04□□□□□ -0.64
CAPN1-225ENST00000533704 NELL1Q92832 810 aa11.04□□□□□ -0.64
CAPN1-225ENST00000533704 SECISBP2LQ93073 1101 aaKnown RBP11.04□□□□□ -0.64
CAPN1-225ENST00000533704 TATDN2Q93075 761 aa11.04□□□□□ -0.64
CAPN1-225ENST00000533704 HEXIM2Q96MH2 286 aaKnown RBP11.04□□□□□ -0.64
CAPN1-225ENST00000533704 HNRNPABQ99729 332 aaKnown RBP11.04□□□□□ -0.64
CAPN1-225ENST00000533704 ARID3AQ99856 593 aa11.04□□□□□ -0.64
CAPN1-225ENST00000533704 EPC1Q9H2F5 836 aa11.04□□□□□ -0.64
CAPN1-225ENST00000533704 POLR3BQ9NW08 1133 aaPredicted RBP11.04□□□□□ -0.64
CAPN1-225ENST00000533704 RAB20Q9NX57 234 aa11.04□□□□□ -0.64
CAPN1-225ENST00000533704 ARMCX3Q9UH62 379 aaPredicted RBP11.04□□□□□ -0.64
CAPN1-225ENST00000533704 SLC8A2Q9UPR5 921 aa11.04□□□□□ -0.64
CAPN1-225ENST00000533704 SH3BP1Q9Y3L3 701 aa11.04□□□□□ -0.64
CAPN1-225ENST00000533704 K7ESF4 209 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 SLC9A3R1O14745 358 aaPredicted RBP11.03□□□□□ -0.64
CAPN1-225ENST00000533704 CYP26A1O43174 497 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 TLR5O60602 858 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 ATG13O75143 517 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 OLFM2O95897 454 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 CYP17A1P05093 508 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 CD44P16070 742 aaKnown RBP11.03□□□□□ -0.64
CAPN1-225ENST00000533704 ACO1P21399 889 aaKnown RBP11.03□□□□□ -0.64
CAPN1-225ENST00000533704 SEC13P55735 322 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 LRRC63Q05C16 580 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 SIM2Q14190 667 aaPredicted RBP11.03□□□□□ -0.64
CAPN1-225ENST00000533704 CBWD6Q4V339 395 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 COBLL1Q53SF7 1204 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 CBWD3Q5JTY5 395 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 CBWD5Q5RIA9 395 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 CLEC20AQ6ZU45 233 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 CEP68Q76N32 757 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 DDX42Q86XP3 938 aaKnown RBP eCLIP11.03□□□□□ -0.64
CAPN1-225ENST00000533704 RPLP0P6Q8NHW5 317 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 SPATA20Q8TB22 786 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 NELFBQ8WX92 580 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 DHTKD1Q96HY7 919 aaPredicted RBP11.03□□□□□ -0.64
CAPN1-225ENST00000533704 GTPBP4Q9BZE4 634 aaKnown RBP11.03□□□□□ -0.64
CAPN1-225ENST00000533704 FBXO44Q9H4M3 255 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 CSNK1G1Q9HCP0 422 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 TLR8Q9NR97 1041 aaKnown RBP11.03□□□□□ -0.64
CAPN1-225ENST00000533704 CISHQ9NSE2 258 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 COMMD8Q9NX08 183 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 GMEB2Q9UKD1 530 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 CTNND2Q9UQB3 1225 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 CFAP54Q96N23 3096 aa11.03□□□□□ -0.64
CAPN1-225ENST00000533704 TBX18O95935 607 aa11.02□□□□□ -0.65
CAPN1-225ENST00000533704 ADH1CP00326 375 aa11.02□□□□□ -0.65
CAPN1-225ENST00000533704 OPRD1P41143 372 aa11.02□□□□□ -0.65
CAPN1-225ENST00000533704 PGFP49763 221 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms