RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 AOC1P19801 751 aa21.58■■□□□ 1.05
CCS-208ENST00000533244 PTMSP20962 102 aa21.58■■□□□ 1.05
CCS-208ENST00000533244 AVPR2P30518 371 aa21.58■■□□□ 1.05
CCS-208ENST00000533244 BCAT1P54687 386 aa21.58■■□□□ 1.05
CCS-208ENST00000533244 PLCB2Q00722 1185 aa21.58■■□□□ 1.05
CCS-208ENST00000533244 APBA1Q02410 837 aa21.58■■□□□ 1.05
CCS-208ENST00000533244 NCAPHQ15003 741 aa21.58■■□□□ 1.05
CCS-208ENST00000533244 RAB41Q5JT25 222 aa21.58■■□□□ 1.05
CCS-208ENST00000533244 LCLAT1Q6UWP7 414 aa21.58■■□□□ 1.05
CCS-208ENST00000533244 PIGZQ86VD9 579 aa21.58■■□□□ 1.05
CCS-208ENST00000533244 FLCNQ8NFG4 579 aa21.58■■□□□ 1.05
CCS-208ENST00000533244 CHORDC1Q9UHD1 332 aaPredicted RBP21.58■■□□□ 1.05
CCS-208ENST00000533244 XPO1O14980 1071 aaKnown RBP21.57■■□□□ 1.04
CCS-208ENST00000533244 PGFP49763 221 aa21.57■■□□□ 1.04
CCS-208ENST00000533244 MFAP3P55082 362 aa21.57■■□□□ 1.04
CCS-208ENST00000533244 MLLT6P55198 1093 aaPredicted RBP21.57■■□□□ 1.04
CCS-208ENST00000533244 ZXDBP98169 803 aa21.57■■□□□ 1.04
CCS-208ENST00000533244 PDE4CQ08493 712 aa21.57■■□□□ 1.04
CCS-208ENST00000533244 BST2Q10589 180 aaKnown RBP21.57■■□□□ 1.04
CCS-208ENST00000533244 KRT31Q15323 416 aa21.57■■□□□ 1.04
CCS-208ENST00000533244 STILQ15468 1287 aa21.57■■□□□ 1.04
CCS-208ENST00000533244 CNGA2Q16280 664 aa21.57■■□□□ 1.04
CCS-208ENST00000533244 CCDC186Q7Z3E2 898 aa21.57■■□□□ 1.04
CCS-208ENST00000533244 TMEM105Q8N8V8 129 aa21.57■■□□□ 1.04
CCS-208ENST00000533244 FAM83CQ9BQN1 747 aa21.57■■□□□ 1.04
CCS-208ENST00000533244 FUCA2Q9BTY2 467 aa21.57■■□□□ 1.04
CCS-208ENST00000533244 HSD3B7Q9H2F3 369 aa21.57■■□□□ 1.04
CCS-208ENST00000533244 THG1LQ9NWX6 298 aaKnown RBP21.57■■□□□ 1.04
CCS-208ENST00000533244 HESX1Q9UBX0 185 aa21.57■■□□□ 1.04
CCS-208ENST00000533244 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.57■■□□□ 1.04
CCS-208ENST00000533244 F5P12259 2224 aa21.56■■□□□ 1.04
CCS-208ENST00000533244 ZNF18P17022 549 aa21.56■■□□□ 1.04
CCS-208ENST00000533244 COL9A1P20849 921 aa21.56■■□□□ 1.04
CCS-208ENST00000533244 KCNMA1Q12791 1236 aa21.56■■□□□ 1.04
CCS-208ENST00000533244 MTF1Q14872 753 aa21.56■■□□□ 1.04
CCS-208ENST00000533244 HECTD3Q5T447 861 aa21.56■■□□□ 1.04
CCS-208ENST00000533244 TPRG1Q6ZUI0 275 aa21.56■■□□□ 1.04
CCS-208ENST00000533244 SHC3Q92529 594 aa21.56■■□□□ 1.04
CCS-208ENST00000533244 ZFYVE19Q96K21 471 aa21.56■■□□□ 1.04
CCS-208ENST00000533244 BPIFA3Q9BQP9 254 aa21.56■■□□□ 1.04
CCS-208ENST00000533244 TLR8Q9NR97 1041 aaKnown RBP21.56■■□□□ 1.04
CCS-208ENST00000533244 TAB2Q9NYJ8 693 aa21.56■■□□□ 1.04
CCS-208ENST00000533244 AJAP1Q9UKB5 411 aaPredicted RBP21.56■■□□□ 1.04
CCS-208ENST00000533244 KANSL1LA0AUZ9 987 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 BECN2A8MW95 431 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 TULP2O00295 520 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 CYP26A1O43174 497 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 COCHO43405 550 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 ABL1P00519 1130 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 SETSIPP0DME0 302 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 GLULP15104 373 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 BRD2P25440 801 aaKnown RBP21.55■■□□□ 1.04
CCS-208ENST00000533244 PLA2G4AP47712 749 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 SLC8A3P57103 927 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 ANO6Q4KMQ2 910 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 KIAA1958Q8N8K9 716 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 SH3RF2Q8TEC5 729 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 ZFRQ96KR1 1074 aaKnown RBP21.55■■□□□ 1.04
CCS-208ENST00000533244 CCSER2Q9H7U1 834 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 CYLDQ9NQC7 956 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 OSER1Q9NX31 292 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 CPQQ9Y646 472 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 MUC6Q6W4X9 2439 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 PI15O43692 258 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 CALCAP01258 141 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 SCD5Q86SK9 330 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 PJA1Q8NG27 643 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 CSGALNACT1Q8TDX6 532 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 KCTD13Q8WZ19 329 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 MSANTD3Q96H12 275 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 NMUR1Q9HB89 426 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 HPS4Q9NQG7 708 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 GKN1Q9NS71 199 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 LIMA1Q9UHB6 759 aaKnown RBP21.55■■□□□ 1.04
CCS-208ENST00000533244 PIAS3Q9Y6X2 628 aa21.55■■□□□ 1.04
CCS-208ENST00000533244 LEFTY2O00292 366 aa21.54■■□□□ 1.04
CCS-208ENST00000533244 LETM1O95202 739 aaPredicted RBP21.54■■□□□ 1.04
CCS-208ENST00000533244 KRT5P13647 590 aa21.54■■□□□ 1.04
CCS-208ENST00000533244 NUBP1P53384 320 aa21.54■■□□□ 1.04
CCS-208ENST00000533244 TNK2Q07912 1038 aa21.54■■□□□ 1.04
CCS-208ENST00000533244 MEA1Q16626 185 aa21.54■■□□□ 1.04
CCS-208ENST00000533244 ARHGAP44Q17R89 818 aa21.54■■□□□ 1.04
CCS-208ENST00000533244 PM20D1Q6GTS8 502 aa21.54■■□□□ 1.04
CCS-208ENST00000533244 ZNF687Q8N1G0 1237 aa21.54■■□□□ 1.04
CCS-208ENST00000533244 ZNF276Q8N554 614 aa21.54■■□□□ 1.04
CCS-208ENST00000533244 AOPEPQ8N6M6 819 aa21.54■■□□□ 1.04
CCS-208ENST00000533244 UBA3Q8TBC4 463 aa21.54■■□□□ 1.04
CCS-208ENST00000533244 SLC35F5Q8WV83 523 aa21.54■■□□□ 1.04
CCS-208ENST00000533244 OSBPL6Q9BZF3 934 aa21.54■■□□□ 1.04
CCS-208ENST00000533244 FOXQ1Q9C009 403 aa21.54■■□□□ 1.04
CCS-208ENST00000533244 NAT10Q9H0A0 1025 aaKnown RBP21.54■■□□□ 1.04
CCS-208ENST00000533244 KCNH6Q9H252 994 aa21.54■■□□□ 1.04
CCS-208ENST00000533244 LTB4R2Q9NPC1 389 aa21.54■■□□□ 1.04
CCS-208ENST00000533244 GTSE1Q9NYZ3 720 aa21.54■■□□□ 1.04
CCS-208ENST00000533244 DLGAP2Q9P1A6 1054 aa21.54■■□□□ 1.04
CCS-208ENST00000533244 DNAJC12Q9UKB3 198 aa21.54■■□□□ 1.04
CCS-208ENST00000533244 HCN4Q9Y3Q4 1203 aa21.54■■□□□ 1.04
CCS-208ENST00000533244 LRRC10BA6NIK2 292 aa21.53■■□□□ 1.04
CCS-208ENST00000533244 TLR5O60602 858 aa21.53■■□□□ 1.04
CCS-208ENST00000533244 MBL2P11226 248 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms