RNA–Protein interactions for RNA: ENST00000533110.5

CTSB-227, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-227ENST00000533110 FTSJ1Q9UET6 329 aa9.86□□□□□ -0.83
CTSB-227ENST00000533110 DNMT3LQ9UJW3 386 aa9.86□□□□□ -0.83
CTSB-227ENST00000533110 GTF3C4Q9UKN8 822 aa9.86□□□□□ -0.83
CTSB-227ENST00000533110 SPTA1P02549 2419 aa9.86□□□□□ -0.83
CTSB-227ENST00000533110 PYCARD-AS1I3L0S3 204 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 TULP1O00294 542 aaPredicted RBP9.85□□□□□ -0.83
CTSB-227ENST00000533110 HOXC11O43248 304 aaPredicted RBP9.85□□□□□ -0.83
CTSB-227ENST00000533110 FAM189A1O60320 539 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 PFKFB2O60825 505 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 WISP1O95388 367 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 PCSK1P29120 753 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 MAGEA11P43364 429 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 PPP3CCP48454 512 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 CCT8P50990 548 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 FXR2P51116 673 aaKnown RBP eCLIP9.85□□□□□ -0.83
CTSB-227ENST00000533110 RHDQ02161 417 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 STARD3Q14849 445 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 PTPRNQ16849 979 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 EGFLAMQ63HQ2 1017 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 GRAMD4Q6IC98 578 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 C4orf50Q6ZRC1 276 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 DENND5BQ6ZUT9 1274 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 C1orf186Q6ZWK4 172 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 ETFBKMTQ8IXQ9 262 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 PDCL2Q8N4E4 241 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 CADM4Q8NFZ8 388 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 SNIP1Q8TAD8 396 aaKnown RBP9.85□□□□□ -0.83
CTSB-227ENST00000533110 SCFD1Q8WVM8 642 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 OTUB2Q96DC9 234 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 TOE1Q96GM8 510 aaKnown RBP9.85□□□□□ -0.83
CTSB-227ENST00000533110 SLC6A17Q9H1V8 727 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 CD93Q9NPY3 652 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 LARSQ9P2J5 1176 aaKnown RBP9.85□□□□□ -0.83
CTSB-227ENST00000533110 CPSF3Q9UKF6 684 aaKnown RBP9.85□□□□□ -0.83
CTSB-227ENST00000533110 BTBD3Q9Y2F9 522 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 RAD54BQ9Y620 910 aa9.85□□□□□ -0.83
CTSB-227ENST00000533110 MUC22E2RYF6 1773 aaPredicted RBP9.85□□□□□ -0.83
CTSB-227ENST00000533110 A0A1B0GVT2 93 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 B8ZZF3 427 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 SLC28A2O43868 658 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 CTDNEP1O95476 244 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 MBL2P11226 248 aaPredicted RBP9.84□□□□□ -0.83
CTSB-227ENST00000533110 CDC25AP30304 524 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 GRIK1P39086 918 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 IL12RB1P42701 662 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 AFF3P51826 1226 aaKnown RBP9.84□□□□□ -0.83
CTSB-227ENST00000533110 NCKAP1LP55160 1127 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 MYO1EQ12965 1108 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 SF3A1Q15459 793 aaKnown RBP9.84□□□□□ -0.83
CTSB-227ENST00000533110 TEAD4Q15561 434 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 ZRSR1Q15695 479 aaKnown RBP9.84□□□□□ -0.83
CTSB-227ENST00000533110 DCAF12L1Q5VU92 463 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 PCSK4Q6UW60 755 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 DBX2Q6ZNG2 339 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 MIB1Q86YT6 1006 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 TMEM86AQ8N2M4 240 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 SNX19Q92543 992 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 SPATA17Q96L03 361 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 ACOX2Q99424 681 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 LGMNQ99538 433 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 GABRG3Q99928 467 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 TM6SF1Q9BZW5 370 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 WSB2Q9NYS7 404 aaPredicted RBP9.84□□□□□ -0.83
CTSB-227ENST00000533110 L1RE1Q9UN81 338 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 SH3BP1Q9Y3L3 701 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 STARD13Q9Y3M8 1113 aa9.84□□□□□ -0.83
CTSB-227ENST00000533110 A0A0B4J269 797 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 E2F8A0AVK6 867 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 ZNF840PA6NDX5 716 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 K7ENM7 598 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 OLFM2O95897 454 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 CDK4P11802 303 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 C6P13671 934 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 FDPSP14324 419 aaKnown RBP9.83□□□□□ -0.84
CTSB-227ENST00000533110 SCP2P22307 547 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 POLR2BP30876 1174 aaKnown RBP9.83□□□□□ -0.84
CTSB-227ENST00000533110 LHX1P48742 406 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 ACOT2P49753 483 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 BNC1Q01954 994 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 TLE3Q04726 772 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 CCDC173Q0VFZ6 552 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 GNL2Q13823 731 aaKnown RBP9.83□□□□□ -0.84
CTSB-227ENST00000533110 CCDC142Q17RM4 750 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 TTC38Q5R3I4 469 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 VSTM1Q6UX27 236 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 ADGRF2Q8IZF7 708 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 FGF11Q92914 225 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 WBP1Q96G27 269 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 TMEM176AQ96HP8 235 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 CEP295NLQ96MC4 621 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 SLITRK1Q96PX8 696 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 XPO6Q96QU8 1125 aaKnown RBP9.83□□□□□ -0.84
CTSB-227ENST00000533110 NRSN2Q9GZP1 204 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 RNF38Q9H0F5 515 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 DNAJC17Q9NVM6 304 aaKnown RBP9.83□□□□□ -0.84
CTSB-227ENST00000533110 GMIPQ9P107 970 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 MAGEC2Q9UBF1 373 aaPredicted RBP9.83□□□□□ -0.84
CTSB-227ENST00000533110 EIF2B4Q9UI10 523 aaKnown RBP9.83□□□□□ -0.84
CTSB-227ENST00000533110 PCDHGA1Q9Y5H4 931 aa9.83□□□□□ -0.84
CTSB-227ENST00000533110 HELZP42694 1942 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms