RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 INO80DQ53TQ3 878 aaPredicted RBP7.01□□□□□ -1.29
CASP4-208ENST00000530309 TREML2Q5T2D2 321 aa7.01□□□□□ -1.29
CASP4-208ENST00000530309 IGFL4Q6B9Z1 124 aa7.01□□□□□ -1.29
CASP4-208ENST00000530309 VRK3Q8IV63 474 aa7.01□□□□□ -1.29
CASP4-208ENST00000530309 SLC44A3Q8N4M1 653 aa7.01□□□□□ -1.29
CASP4-208ENST00000530309 MBD3L2Q8NHZ7 208 aaPredicted RBP7.01□□□□□ -1.29
CASP4-208ENST00000530309 ABHD5Q8WTS1 349 aa7.01□□□□□ -1.29
CASP4-208ENST00000530309 SOCS4Q8WXH5 440 aa7.01□□□□□ -1.29
CASP4-208ENST00000530309 LINC00476Q8WZB0 136 aa7.01□□□□□ -1.29
CASP4-208ENST00000530309 RMDN3Q96TC7 470 aa7.01□□□□□ -1.29
CASP4-208ENST00000530309 VN1R3Q9BXE9 311 aa7.01□□□□□ -1.29
CASP4-208ENST00000530309 CYP4F11Q9HBI6 524 aa7.01□□□□□ -1.29
CASP4-208ENST00000530309 SYBUQ9NX95 663 aa7.01□□□□□ -1.29
CASP4-208ENST00000530309 EHD3Q9NZN3 535 aa7.01□□□□□ -1.29
CASP4-208ENST00000530309 DKK3Q9UBP4 350 aa7.01□□□□□ -1.29
CASP4-208ENST00000530309 CA14Q9ULX7 337 aa7.01□□□□□ -1.29
CASP4-208ENST00000530309 DRG1Q9Y295 367 aaKnown RBP7.01□□□□□ -1.29
CASP4-208ENST00000530309 OR2W5A6NFC9 320 aa7□□□□□ -1.29
CASP4-208ENST00000530309 MATN3O15232 486 aa7□□□□□ -1.29
CASP4-208ENST00000530309 VNN1O95497 513 aa7□□□□□ -1.29
CASP4-208ENST00000530309 ONECUT2O95948 504 aa7□□□□□ -1.29
CASP4-208ENST00000530309 FESP07332 822 aa7□□□□□ -1.29
CASP4-208ENST00000530309 IL6RP08887 468 aaPredicted RBP7□□□□□ -1.29
CASP4-208ENST00000530309 RBL1P28749 1068 aa7□□□□□ -1.29
CASP4-208ENST00000530309 LIPAP38571 399 aa7□□□□□ -1.29
CASP4-208ENST00000530309 MTHFSP49914 203 aa7□□□□□ -1.29
CASP4-208ENST00000530309 CLCN2P51788 898 aa7□□□□□ -1.29
CASP4-208ENST00000530309 TIRAPP58753 221 aa7□□□□□ -1.29
CASP4-208ENST00000530309 ATP1A4Q13733 1029 aa7□□□□□ -1.29
CASP4-208ENST00000530309 BMPR2Q13873 1038 aa7□□□□□ -1.29
CASP4-208ENST00000530309 TXNRD1Q16881 649 aa7□□□□□ -1.29
CASP4-208ENST00000530309 ABLIM2Q6H8Q1 611 aa7□□□□□ -1.29
CASP4-208ENST00000530309 TLDC1Q6P9B6 456 aa7□□□□□ -1.29
CASP4-208ENST00000530309 Q6YL49 198 aa7□□□□□ -1.29
CASP4-208ENST00000530309 CAND1Q86VP6 1230 aaKnown RBP7□□□□□ -1.29
CASP4-208ENST00000530309 CERS3Q8IU89 383 aa7□□□□□ -1.29
CASP4-208ENST00000530309 NKAPQ8N5F7 415 aaKnown RBP7□□□□□ -1.29
CASP4-208ENST00000530309 MYCT1Q8N699 235 aa7□□□□□ -1.29
CASP4-208ENST00000530309 ANKRD42Q8N9B4 389 aa7□□□□□ -1.29
CASP4-208ENST00000530309 ATG16L2Q8NAA4 619 aa7□□□□□ -1.29
CASP4-208ENST00000530309 FAM71BQ8TC56 605 aa7□□□□□ -1.29
CASP4-208ENST00000530309 TFAP2BQ92481 460 aa7□□□□□ -1.29
CASP4-208ENST00000530309 CCT6BQ92526 530 aa7□□□□□ -1.29
CASP4-208ENST00000530309 RFKQ969G6 155 aa7□□□□□ -1.29
CASP4-208ENST00000530309 R3HDM4Q96D70 268 aa7□□□□□ -1.29
CASP4-208ENST00000530309 RSPRY1Q96DX4 576 aa7□□□□□ -1.29
CASP4-208ENST00000530309 PBKQ96KB5 322 aa7□□□□□ -1.29
CASP4-208ENST00000530309 AGO4Q9HCK5 861 aaKnown RBP7□□□□□ -1.29
CASP4-208ENST00000530309 SH2B3Q9UQQ2 575 aa7□□□□□ -1.29
CASP4-208ENST00000530309 DTNAQ9Y4J8 743 aa7□□□□□ -1.29
CASP4-208ENST00000530309 MORC2Q9Y6X9 1032 aaPredicted RBP7□□□□□ -1.29
CASP4-208ENST00000530309 SYT5O00445 386 aa6.99□□□□□ -1.29
CASP4-208ENST00000530309 PIP5K1CO60331 668 aa6.99□□□□□ -1.29
CASP4-208ENST00000530309 NXPH3O95157 252 aa6.99□□□□□ -1.29
CASP4-208ENST00000530309 ESRRBO95718 433 aa6.99□□□□□ -1.29
CASP4-208ENST00000530309 GLP2RO95838 553 aa6.99□□□□□ -1.29
CASP4-208ENST00000530309 ADH4P08319 380 aa6.99□□□□□ -1.29
CASP4-208ENST00000530309 ZFXP17010 805 aaPredicted RBP6.99□□□□□ -1.29
CASP4-208ENST00000530309 MCM7P33993 719 aa6.99□□□□□ -1.29
CASP4-208ENST00000530309 GRK6P43250 576 aa6.99□□□□□ -1.29
CASP4-208ENST00000530309 KAZNQ674X7 775 aa6.99□□□□□ -1.29
CASP4-208ENST00000530309 CRIP3Q6Q6R5 217 aa6.99□□□□□ -1.29
CASP4-208ENST00000530309 RAB11FIP4Q86YS3 637 aa6.99□□□□□ -1.29
CASP4-208ENST00000530309 CACNA2D3Q8IZS8 1091 aa6.99□□□□□ -1.29
CASP4-208ENST00000530309 STYXQ8WUJ0 223 aa6.99□□□□□ -1.29
CASP4-208ENST00000530309 LTV1Q96GA3 475 aaPredicted RBP6.99□□□□□ -1.29
CASP4-208ENST00000530309 PRPF18Q99633 342 aaKnown RBP6.99□□□□□ -1.29
CASP4-208ENST00000530309 RIMKLBQ9ULI2 386 aa6.99□□□□□ -1.29
CASP4-208ENST00000530309 COL15A1P39059 1388 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 PSMD9O00233 223 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 ACKR2O00590 384 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 NTSR2O95665 410 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 VIPP01282 170 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 ITGA5P08648 1049 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 NPPBP16860 134 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 SERPINF1P36955 418 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 MPLP40238 635 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 SEC24CP53992 1094 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 MPP3Q13368 585 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 CLEC9AQ6UXN8 241 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 RASGRP3Q8IV61 690 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 ULK2Q8IYT8 1036 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 SUPT20HQ8NEM7 779 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 CAVIN3Q969G5 261 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 GRAMD1AQ96CP6 724 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 TRIM36Q9NQ86 728 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 HELLSQ9NRZ9 838 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 DACT1Q9NYF0 836 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 LRFN1Q9P244 771 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 SLC27A6Q9Y2P4 619 aa6.98□□□□□ -1.29
CASP4-208ENST00000530309 EPN1Q9Y6I3 576 aaPredicted RBP6.98□□□□□ -1.29
CASP4-208ENST00000530309 COL4A3Q01955 1670 aa6.97□□□□□ -1.29
CASP4-208ENST00000530309 EXOC5O00471 708 aa6.97□□□□□ -1.29
CASP4-208ENST00000530309 SRGAP2BP0DMP2 458 aa6.97□□□□□ -1.29
CASP4-208ENST00000530309 NR2F6P10588 404 aa6.97□□□□□ -1.29
CASP4-208ENST00000530309 CD19P15391 556 aa6.97□□□□□ -1.29
CASP4-208ENST00000530309 TNFRSF1AP19438 455 aa6.97□□□□□ -1.29
CASP4-208ENST00000530309 BUD31P41223 144 aaPredicted RBP6.97□□□□□ -1.29
CASP4-208ENST00000530309 MRPS35P82673 323 aaKnown RBP6.97□□□□□ -1.29
CASP4-208ENST00000530309 FOXO1Q12778 655 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms