RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	CUL4B	Q13620	913 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	GRM4	Q14833	912 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	GEN1	Q17RS7	908 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	FAM110C	Q1W6H9	321 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	SPDYE7P	Q495Y7	208 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	HS1BP3	Q53T59	392 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	RABL3	Q5HYI8	236 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	INTS11	Q5TA45	600 aa	Known RBP	4.57	□□□□□ -1.68
RDX-208	ENST00000530085	ANKRD45	Q5TZF3	282 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	RINT1	Q6NUQ1	792 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	ABRA	Q8N0Z2	381 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	NAXE	Q8NCW5	288 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	OR6Y1	Q8NGX8	325 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.57	□□□□□ -1.68
RDX-208	ENST00000530085	CPT1C	Q8TCG5	803 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	RILPL2	Q969X0	211 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	TMEM125	Q96AQ2	219 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	SDCCAG3	Q96C92	435 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	PPM1M	Q96MI6	270 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	PYM1	Q9BRP8	204 aa	Known RBP	4.57	□□□□□ -1.68
RDX-208	ENST00000530085	NUDT22	Q9BRQ3	303 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	ZCWPW1	Q9H0M4	648 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	ZNF768	Q9H5H4	540 aa	Known RBP	4.57	□□□□□ -1.68
RDX-208	ENST00000530085	TAF1D	Q9H5J8	278 aa	Predicted RBP	4.57	□□□□□ -1.68
RDX-208	ENST00000530085	GALNT9	Q9HCQ5	603 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	RIC8A	Q9NPQ8	531 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	GGA3	Q9NZ52	723 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	SERTAD3	Q9UJW9	196 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	USP22	Q9UPT9	525 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	CRYL1	Q9Y2S2	319 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	MAP3K2	Q9Y2U5	619 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	NOX1	Q9Y5S8	564 aa		4.57	□□□□□ -1.68
RDX-208	ENST00000530085	PNMA6E	A0A0J9YXQ4	647 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	MARCH11	A6NNE9	402 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	ZAR1L	A6NP61	321 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	AGPS	O00116	658 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	RNASET2	O00584	256 aa	Known RBP	4.56	□□□□□ -1.68
RDX-208	ENST00000530085	SNX2	O60749	519 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	TAF5L	O75529	589 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	NCR1	O76036	304 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	LMNA	P02545	664 aa	Known RBP	4.56	□□□□□ -1.68
RDX-208	ENST00000530085	ITGB3	P05106	788 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	PRKCB	P05771	671 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	INSRR	P14616	1297 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	KLRK1	P26718	216 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	EPHA3	P29320	983 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	PDE6C	P51160	858 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
RDX-208	ENST00000530085	DDX10	Q13206	875 aa	Known RBP	4.56	□□□□□ -1.68
RDX-208	ENST00000530085	ICAM4	Q14773	271 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	LY6K	Q17RY6	165 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	TRIM60	Q495X7	471 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	COLGALT2	Q8IYK4	626 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	SIMC1	Q8NDZ2	872 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	SUN3	Q8TAQ9	357 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	WDR60	Q8WVS4	1066 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	ASB12	Q8WXK4	309 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	FAM136A	Q96C01	138 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	TEPSIN	Q96N21	525 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	TRAPPC9	Q96Q05	1148 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	GPR20	Q99678	358 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	ALOXE3	Q9BYJ1	711 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	INO80B	Q9C086	356 aa	Predicted RBP	4.56	□□□□□ -1.68
RDX-208	ENST00000530085	CD248	Q9HCU0	757 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	SEPSECS	Q9HD40	501 aa	Known RBP	4.56	□□□□□ -1.68
RDX-208	ENST00000530085	AKIP1	Q9NQ31	210 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	FSCN3	Q9NQT6	498 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	INTS13	Q9NVM9	706 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	FEM1B	Q9UK73	627 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	DAPP1	Q9UN19	280 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	SNX14	Q9Y5W7	946 aa		4.56	□□□□□ -1.68
RDX-208	ENST00000530085	COL15A1	P39059	1388 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	FAM90A18P	A6NE21	464 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	FAM90A16P	A6NEW6	464 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	FAM90A9P	A6NNJ1	464 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	FAM90A5P	A8MXJ8	464 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085		H0Y3Z8	333 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	PPM1D	O15297	605 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	EPB41L2	O43491	1005 aa	Known RBP	4.55	□□□□□ -1.68
RDX-208	ENST00000530085	POLB	P06746	335 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	FAM90A15P	P0C7V4	464 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	FAM90A14P	P0C7W9	464 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	CNTF	P26441	200 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	ZEB1	P37275	1124 aa	Predicted RBP	4.55	□□□□□ -1.68
RDX-208	ENST00000530085	AARS	P49588	968 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
RDX-208	ENST00000530085	VAV2	P52735	878 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	PRKAA2	P54646	552 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	TIRAP	P58753	221 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	SP2	Q02086	613 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	REST	Q13127	1097 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	TOB2	Q14106	344 aa	Predicted RBP	4.55	□□□□□ -1.68
RDX-208	ENST00000530085	SIM2	Q14190	667 aa	Predicted RBP	4.55	□□□□□ -1.68
RDX-208	ENST00000530085	PUM1	Q14671	1186 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
RDX-208	ENST00000530085	DEPDC1	Q5TB30	811 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	ARMC6	Q6NXE6	501 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	NFRKB	Q6P4R8	1299 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	CLEC9A	Q6UXN8	241 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	RAB11FIP2	Q7L804	512 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	DTX2	Q86UW9	622 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	LRRTM4	Q86VH4	590 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms