RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 E2F8A0AVK6 867 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 TISP43B9A030 160 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 GABRDO14764 452 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 SCAMP3O14828 347 aaKnown RBP11.12□□□□□ -0.63
COPB1-207ENST00000529866 HOXC11O43248 304 aaPredicted RBP11.12□□□□□ -0.63
COPB1-207ENST00000529866 CENPBP07199 599 aaPredicted RBP11.12□□□□□ -0.63
COPB1-207ENST00000529866 BDNFP23560 247 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 NTSR1P30989 418 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 UBA7P41226 1012 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 NOP14P78316 857 aaKnown RBP11.12□□□□□ -0.63
COPB1-207ENST00000529866 RBP5P82980 135 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 CYP27A1Q02318 531 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 C19orf57Q0VDD7 668 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 MYO1EQ12965 1108 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 GRIK2Q13002 908 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 CCDC142Q17RM4 750 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 TDRD10Q5VZ19 366 aaKnown RBP11.12□□□□□ -0.63
COPB1-207ENST00000529866 ARL6IP4Q66PJ3 421 aaKnown RBP11.12□□□□□ -0.63
COPB1-207ENST00000529866 DPH6Q7L8W6 267 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 OSTM1Q86WC4 334 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 SLC41A1Q8IVJ1 513 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 TERB1Q8NA31 727 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 HVCN1Q96D96 273 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 BBC3Q96PG8 261 aaPredicted RBP11.12□□□□□ -0.63
COPB1-207ENST00000529866 FIZ1Q96SL8 496 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 FAM213AQ9BRX8 229 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 RBAKQ9NYW8 714 aaPredicted RBP11.12□□□□□ -0.63
COPB1-207ENST00000529866 EXOC7Q9UPT5 735 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 PI4KAP42356 2102 aa11.12□□□□□ -0.63
COPB1-207ENST00000529866 TULP3O75386 442 aa11.11□□□□□ -0.63
COPB1-207ENST00000529866 ZIC2O95409 532 aaPredicted RBP11.11□□□□□ -0.63
COPB1-207ENST00000529866 CER1O95813 267 aa11.11□□□□□ -0.63
COPB1-207ENST00000529866 LDHAP00338 332 aaKnown RBP11.11□□□□□ -0.63
COPB1-207ENST00000529866 OAS1P00973 400 aaKnown RBP11.11□□□□□ -0.63
COPB1-207ENST00000529866 TMEM191BP0C7N4 346 aa11.11□□□□□ -0.63
COPB1-207ENST00000529866 PLCG1P19174 1290 aa11.11□□□□□ -0.63
COPB1-207ENST00000529866 NDUFV2P19404 249 aa11.11□□□□□ -0.63
COPB1-207ENST00000529866 GJB2P29033 226 aa11.11□□□□□ -0.63
COPB1-207ENST00000529866 USP46P62068 366 aa11.11□□□□□ -0.63
COPB1-207ENST00000529866 PSMC1P62191 440 aaKnown RBP11.11□□□□□ -0.63
COPB1-207ENST00000529866 SOWAHAQ2M3V2 549 aa11.11□□□□□ -0.63
COPB1-207ENST00000529866 MCTP1Q6DN14 999 aa11.11□□□□□ -0.63
COPB1-207ENST00000529866 CRELD2Q6UXH1 353 aaPredicted RBP11.11□□□□□ -0.63
COPB1-207ENST00000529866 TMPRSS7Q7RTY8 843 aa11.11□□□□□ -0.63
COPB1-207ENST00000529866 ETFBKMTQ8IXQ9 262 aa11.11□□□□□ -0.63
COPB1-207ENST00000529866 CHPFQ8IZ52 775 aa11.11□□□□□ -0.63
COPB1-207ENST00000529866 PHTF2Q8N3S3 785 aa11.11□□□□□ -0.63
COPB1-207ENST00000529866 GALNT15Q8N3T1 639 aa11.11□□□□□ -0.63
COPB1-207ENST00000529866 KRI1Q8N9T8 703 aaKnown RBP11.11□□□□□ -0.63
COPB1-207ENST00000529866 SETD7Q8WTS6 366 aaKnown RBP11.11□□□□□ -0.63
COPB1-207ENST00000529866 ZNF419Q96HQ0 510 aaPredicted RBP11.11□□□□□ -0.63
COPB1-207ENST00000529866 UBL7Q96S82 380 aaPredicted RBP11.11□□□□□ -0.63
COPB1-207ENST00000529866 RNF38Q9H0F5 515 aa11.11□□□□□ -0.63
COPB1-207ENST00000529866 KIAA1522Q9P206 1035 aaPredicted RBP11.11□□□□□ -0.63
COPB1-207ENST00000529866 PCOLCE2Q9UKZ9 415 aa11.11□□□□□ -0.63
COPB1-207ENST00000529866 SH3BP1Q9Y3L3 701 aa11.11□□□□□ -0.63
COPB1-207ENST00000529866 KIF3AQ9Y496 699 aa11.11□□□□□ -0.63
COPB1-207ENST00000529866 ADAMTS20P59510 1910 aa11.11□□□□□ -0.63
COPB1-207ENST00000529866 SCN1AP35498 2009 aa11.11□□□□□ -0.63
COPB1-207ENST00000529866 A0A1B0GTW7 788 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 A0A1W2PQF6 199 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 MEI4A8MW99 385 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 F8VP50 259 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 HCRTO43612 131 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 CBFA2T3O75081 653 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 ADSSP30520 456 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 WASP42768 502 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 GRIN1Q05586 938 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 TAF10Q12962 218 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 MCM6Q14566 821 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 ANO4Q32M45 955 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 IL27RAQ6UWB1 636 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 SCUBE3Q8IX30 993 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 NAT16Q8N8M0 369 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 PDZD8Q8NEN9 1154 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 ADAM32Q8TC27 787 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 IPO4Q8TEX9 1081 aaKnown RBP11.1□□□□□ -0.63
COPB1-207ENST00000529866 SCFD1Q8WVM8 642 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 RAD54LQ92698 747 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 SAAL1Q96ER3 474 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 ANKRD36BP1Q96IX9 119 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 C8orf48Q96LL4 319 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 CDC6Q99741 560 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 DUSP9Q99956 384 aaKnown RBP11.1□□□□□ -0.63
COPB1-207ENST00000529866 MTMR12Q9C0I1 747 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 CACNA2D2Q9NY47 1150 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 STARD13Q9Y3M8 1113 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 NFE2L3Q9Y4A8 694 aa11.1□□□□□ -0.63
COPB1-207ENST00000529866 ZNF638Q14966 1978 aaKnown RBP11.1□□□□□ -0.63
COPB1-207ENST00000529866 KIAA1549LQ6ZVL6 1849 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 A0A087WV48 116 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 FLRT2O43155 660 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 ZNF883P0CG24 379 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 CD6P30203 668 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 ABCG1P45844 678 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 EGFLAMQ63HQ2 1017 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 GRAMD4Q6IC98 578 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 KIAA1324Q6UXG2 1013 aaKnown RBP11.09□□□□□ -0.63
COPB1-207ENST00000529866 ZNF720Q7Z2F6 126 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 SLCO6A1Q86UG4 719 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms