RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 FAM200BP0CF97 657 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 TBXAS1P24557 533 aaPredicted RBP16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 ORC1Q13415 861 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 CUL2Q13617 745 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 RUNX3Q13761 415 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 MTF1Q14872 753 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 ITPRIPL2Q3MIP1 535 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 CCDC40Q4G0X9 1142 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 ARHGAP17Q68EM7 881 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 SLC4A11Q8NBS3 891 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 ZFYVE19Q96K21 471 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 CYP2S1Q96SQ9 504 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 CHRDQ9H2X0 955 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 FBXO44Q9H4M3 255 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 TRPC7Q9HCX4 862 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 FAM49BQ9NUQ9 324 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 GTSE1Q9NYZ3 720 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 FBXO4Q9UKT5 387 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 CEP250Q9BV73 2442 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 FGFR1OPO95684 399 aaKnown RBP16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 CHRNB1P11230 501 aa16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 CD58P19256 250 aa16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 KPNA1P52294 538 aaPredicted RBP16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 RAD23BP54727 409 aa16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 MAP3K7CLP57077 242 aa16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 YWHAEP62258 255 aaKnown RBP16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 ZXDBP98169 803 aa16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 CAMK4Q16566 473 aa16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 ZNF528Q3MIS6 628 aa16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 PPP1R26Q5T8A7 1209 aaPredicted RBP16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 MAML2Q8IZL2 1156 aaPredicted RBP16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 MLKLQ8NB16 471 aa16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 SCAMP5Q8TAC9 235 aa16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 LMO3Q8TAP4 145 aa16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 OSCP1Q8WVF1 389 aa16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 FBXO32Q969P5 355 aa16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 TMEM176AQ96HP8 235 aa16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 ARID3AQ99856 593 aa16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 UBXN6Q9BZV1 441 aa16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 RNF38Q9H0F5 515 aa16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 LMBRD1Q9NUN5 540 aa16.35■□□□□ 0.21
CCDC90B-215ENST00000529745 STX17P56962 302 aa16.34■□□□□ 0.21
CCDC90B-215ENST00000529745 TNK2Q07912 1038 aa16.34■□□□□ 0.21
CCDC90B-215ENST00000529745 CC2D1AQ6P1N0 951 aaPredicted RBP16.34■□□□□ 0.21
CCDC90B-215ENST00000529745 TXNDC11Q6PKC3 985 aa16.34■□□□□ 0.21
CCDC90B-215ENST00000529745 DDX42Q86XP3 938 aaKnown RBP eCLIP16.34■□□□□ 0.21
CCDC90B-215ENST00000529745 ZNF276Q8N554 614 aa16.34■□□□□ 0.21
CCDC90B-215ENST00000529745 SH3RF2Q8TEC5 729 aa16.34■□□□□ 0.21
CCDC90B-215ENST00000529745 CHFRQ96EP1 664 aa16.34■□□□□ 0.21
CCDC90B-215ENST00000529745 MED15Q96RN5 788 aa16.34■□□□□ 0.21
CCDC90B-215ENST00000529745 SRRTQ9BXP5 876 aaKnown RBP16.34■□□□□ 0.21
CCDC90B-215ENST00000529745 DUSP16Q9BY84 665 aa16.34■□□□□ 0.21
CCDC90B-215ENST00000529745 SCML2Q9UQR0 700 aa16.34■□□□□ 0.21
CCDC90B-215ENST00000529745 CCDC192P0DO97 292 aa16.33■□□□□ 0.2
CCDC90B-215ENST00000529745 ADORA2BP29275 332 aa16.33■□□□□ 0.2
CCDC90B-215ENST00000529745 SOX9P48436 509 aa16.33■□□□□ 0.2
CCDC90B-215ENST00000529745 AMPD2Q01433 879 aa16.33■□□□□ 0.2
CCDC90B-215ENST00000529745 CETN1Q12798 172 aa16.33■□□□□ 0.2
CCDC90B-215ENST00000529745 KCNH2Q12809 1159 aa16.33■□□□□ 0.2
CCDC90B-215ENST00000529745 LRRC32Q14392 662 aa16.33■□□□□ 0.2
CCDC90B-215ENST00000529745 EML3Q32P44 896 aa16.33■□□□□ 0.2
CCDC90B-215ENST00000529745 DGKKQ5KSL6 1271 aa16.33■□□□□ 0.2
CCDC90B-215ENST00000529745 SMYD5Q6GMV2 418 aa16.33■□□□□ 0.2
CCDC90B-215ENST00000529745 SYNPOQ8N3V7 929 aa16.33■□□□□ 0.2
CCDC90B-215ENST00000529745 NELL1Q92832 810 aa16.33■□□□□ 0.2
CCDC90B-215ENST00000529745 ATP2A3Q93084 1043 aa16.33■□□□□ 0.2
CCDC90B-215ENST00000529745 NT5C1BQ96P26 610 aa16.33■□□□□ 0.2
CCDC90B-215ENST00000529745 PRMT8Q9NR22 394 aaPredicted RBP16.33■□□□□ 0.2
CCDC90B-215ENST00000529745 KIAA1257Q9ULG3 409 aa16.33■□□□□ 0.2
CCDC90B-215ENST00000529745 NDRG2Q9UN36 371 aaKnown RBP16.33■□□□□ 0.2
CCDC90B-215ENST00000529745 USP3Q9Y6I4 520 aa16.33■□□□□ 0.2
CCDC90B-215ENST00000529745 OTOL1A6NHN0 477 aaPredicted RBP16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 LEFTY2O00292 366 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 TRDMT1O14717 391 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 LAMTOR5O43504 91 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 AFPP02771 609 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 SP9P0CG40 484 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 MAP1BP46821 2468 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 IFNAR2P48551 515 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 KIF11P52732 1056 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 GCNT1Q02742 428 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 CCINQ13939 588 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 ZNF394Q53GI3 561 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 HECTD3Q5T447 861 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 TRIM68Q6AZZ1 485 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 GPRIN1Q7Z2K8 1008 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 CCDC186Q7Z3E2 898 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 CPA6Q8N4T0 437 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 ZFRQ96KR1 1074 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 HEXIM2Q96MH2 286 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 NUP62CLQ9H1M0 184 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 SEMA4AQ9H3S1 761 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 EBF3Q9H4W6 596 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 ECT2Q9H8V3 914 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 LMAN1LQ9HAT1 526 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 CYLDQ9NQC7 956 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 TLR8Q9NR97 1041 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 DUS2Q9NX74 493 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 GMIPQ9P107 970 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms