RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 MLLT6P55198 1093 aaPredicted RBP12.79□□□□□ -0.36
SDHD-205ENST00000528048 GCNT1Q02742 428 aa12.79□□□□□ -0.36
SDHD-205ENST00000528048 MAN2A1Q16706 1144 aa12.79□□□□□ -0.36
SDHD-205ENST00000528048 EXOC3L4Q17RC7 722 aa12.79□□□□□ -0.36
SDHD-205ENST00000528048 ITPRIPL2Q3MIP1 535 aa12.79□□□□□ -0.36
SDHD-205ENST00000528048 CWF19L1Q69YN2 538 aaKnown RBP12.79□□□□□ -0.36
SDHD-205ENST00000528048 CLEC20AQ6ZU45 233 aa12.79□□□□□ -0.36
SDHD-205ENST00000528048 DDX42Q86XP3 938 aaKnown RBP eCLIP12.79□□□□□ -0.36
SDHD-205ENST00000528048 TTC8Q8TAM2 541 aa12.79□□□□□ -0.36
SDHD-205ENST00000528048 LMO3Q8TAP4 145 aa12.79□□□□□ -0.36
SDHD-205ENST00000528048 SH3RF2Q8TEC5 729 aa12.79□□□□□ -0.36
SDHD-205ENST00000528048 FAM3CQ92520 227 aa12.79□□□□□ -0.36
SDHD-205ENST00000528048 ZFYVE19Q96K21 471 aa12.79□□□□□ -0.36
SDHD-205ENST00000528048 LRRC3BQ96PB8 259 aa12.79□□□□□ -0.36
SDHD-205ENST00000528048 MED15Q96RN5 788 aa12.79□□□□□ -0.36
SDHD-205ENST00000528048 TUBGCP2Q9BSJ2 902 aa12.79□□□□□ -0.36
SDHD-205ENST00000528048 CRACR2AQ9BSW2 395 aa12.79□□□□□ -0.36
SDHD-205ENST00000528048 OSBPL6Q9BZF3 934 aa12.79□□□□□ -0.36
SDHD-205ENST00000528048 DUS2Q9NX74 493 aaKnown RBP12.79□□□□□ -0.36
SDHD-205ENST00000528048 GCNT4Q9P109 453 aa12.79□□□□□ -0.36
SDHD-205ENST00000528048 RAPGEFL1Q9UHV5 662 aa12.79□□□□□ -0.36
SDHD-205ENST00000528048 ARHGAP26Q9UNA1 814 aa12.79□□□□□ -0.36
SDHD-205ENST00000528048 CCL26Q9Y258 94 aa12.79□□□□□ -0.36
SDHD-205ENST00000528048 TRIP11Q15643 1979 aa12.79□□□□□ -0.36
SDHD-205ENST00000528048 GTPBP10A4D1E9 387 aaKnown RBP12.78□□□□□ -0.36
SDHD-205ENST00000528048 SLC9A3R1O14745 358 aaPredicted RBP12.78□□□□□ -0.36
SDHD-205ENST00000528048 DCNP07585 359 aaKnown RBP12.78□□□□□ -0.36
SDHD-205ENST00000528048 RALAP11233 206 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 PTMSP20962 102 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 EEF1GP26641 437 aaKnown RBP12.78□□□□□ -0.36
SDHD-205ENST00000528048 SLC7A9P82251 487 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 RUNX3Q13761 415 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 MTF1Q14872 753 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 STILQ15468 1287 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 STX1AQ16623 288 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 GOLGA7BQ2TAP0 167 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 VWA3BQ502W6 1294 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 HSP90AA4PQ58FG1 418 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 TADA2BQ86TJ2 420 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 RALGPS2Q86X27 583 aaPredicted RBP12.78□□□□□ -0.36
SDHD-205ENST00000528048 IRF2BP1Q8IU81 584 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 ARHGAP18Q8N392 663 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 DTWD2Q8NBA8 298 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 ZMIZ2Q8NF64 920 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 ANKRD20A12PQ8NF67 263 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 PJA1Q8NG27 643 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 ENOX1Q8TC92 643 aaKnown RBP12.78□□□□□ -0.36
SDHD-205ENST00000528048 SLC22A12Q96S37 553 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 DDX23Q9BUQ8 820 aaKnown RBP12.78□□□□□ -0.36
SDHD-205ENST00000528048 FOXQ1Q9C009 403 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 NAT10Q9H0A0 1025 aaKnown RBP12.78□□□□□ -0.36
SDHD-205ENST00000528048 LRRC4Q9HBW1 653 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 LTB4R2Q9NPC1 389 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 GMIPQ9P107 970 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 NDRG2Q9UN36 371 aaKnown RBP12.78□□□□□ -0.36
SDHD-205ENST00000528048 SCML2Q9UQR0 700 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 NFE2L3Q9Y4A8 694 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 NCANO14594 1321 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 SCN1AP35498 2009 aa12.78□□□□□ -0.36
SDHD-205ENST00000528048 FAM92AA1XBS5 289 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 KCNJ18B7U540 433 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 LEFTY2O00292 366 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 OAS1P00973 400 aaKnown RBP12.77□□□□□ -0.37
SDHD-205ENST00000528048 CDK11BP21127 795 aaKnown RBP12.77□□□□□ -0.37
SDHD-205ENST00000528048 ATP5C1P36542 298 aaKnown RBP12.77□□□□□ -0.37
SDHD-205ENST00000528048 USP8P40818 1118 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 MAGEA9P43362 315 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 TUBP50607 506 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 KIF11P52732 1056 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 BCAT1P54687 386 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 GOLGA8FQ08AF8 430 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 GOLGA8DPQ0D2H9 430 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 KCNJ12Q14500 433 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 CNGA2Q16280 664 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 SNX30Q5VWJ9 437 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 RBM43Q6ZSC3 357 aaKnown RBP12.77□□□□□ -0.37
SDHD-205ENST00000528048 ARHGEF19Q8IW93 802 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 CPA6Q8N4T0 437 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 RBBP8NLQ8NC74 664 aaPredicted RBP12.77□□□□□ -0.37
SDHD-205ENST00000528048 UBA3Q8TBC4 463 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 OSCP1Q8WVF1 389 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 ATP2A3Q93084 1043 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 FAM122AQ96E09 287 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 FAM83CQ9BQN1 747 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 RNF38Q9H0F5 515 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 NDST4Q9H3R1 872 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 EBF3Q9H4W6 596 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 SMPD4Q9NXE4 827 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 GTSE1Q9NYZ3 720 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 TSPAN16Q9UKR8 245 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 SH3BP1Q9Y3L3 701 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 CPQQ9Y646 472 aa12.77□□□□□ -0.37
SDHD-205ENST00000528048 HHLA1C9JL84 531 aa12.76□□□□□ -0.37
SDHD-205ENST00000528048 XPO1O14980 1071 aaKnown RBP12.76□□□□□ -0.37
SDHD-205ENST00000528048 COCHO43405 550 aa12.76□□□□□ -0.37
SDHD-205ENST00000528048 MED7O43513 233 aa12.76□□□□□ -0.37
SDHD-205ENST00000528048 TLR5O60602 858 aa12.76□□□□□ -0.37
SDHD-205ENST00000528048 LETM1O95202 739 aaPredicted RBP12.76□□□□□ -0.37
SDHD-205ENST00000528048 SETSIPP0DME0 302 aa12.76□□□□□ -0.37
SDHD-205ENST00000528048 TCF3P15923 654 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms