RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 ATG2BQ96BY7 2078 aa16.73■□□□□ 0.27
CTTN-212ENST00000527962 DENND4CQ5VZ89 1909 aa16.73■□□□□ 0.27
CTTN-212ENST00000527962 SGK1O00141 431 aa16.73■□□□□ 0.27
CTTN-212ENST00000527962 CDX4O14627 284 aaPredicted RBP16.73■□□□□ 0.27
CTTN-212ENST00000527962 AP5Z1O43299 807 aa16.73■□□□□ 0.27
CTTN-212ENST00000527962 STAU1O95793 577 aaKnown RBP16.73■□□□□ 0.27
CTTN-212ENST00000527962 CST3P01034 146 aaPredicted RBP16.73■□□□□ 0.27
CTTN-212ENST00000527962 TRIM21P19474 475 aaKnown RBP16.73■□□□□ 0.27
CTTN-212ENST00000527962 AP3M2P53677 418 aa16.73■□□□□ 0.27
CTTN-212ENST00000527962 GAB4Q2WGN9 574 aa16.73■□□□□ 0.27
CTTN-212ENST00000527962 FAM26FQ5R3K3 315 aa16.73■□□□□ 0.27
CTTN-212ENST00000527962 SDE2Q6IQ49 451 aa16.73■□□□□ 0.27
CTTN-212ENST00000527962 RLN3Q8WXF3 142 aa16.73■□□□□ 0.27
CTTN-212ENST00000527962 USP28Q96RU2 1077 aa16.73■□□□□ 0.27
CTTN-212ENST00000527962 MED10Q9BTT4 135 aa16.73■□□□□ 0.27
CTTN-212ENST00000527962 TRIM9Q9C026 710 aa16.73■□□□□ 0.27
CTTN-212ENST00000527962 ZNF518BQ9C0D4 1074 aa16.73■□□□□ 0.27
CTTN-212ENST00000527962 KBTBD4Q9NVX7 518 aa16.73■□□□□ 0.27
CTTN-212ENST00000527962 COMMD8Q9NX08 183 aa16.73■□□□□ 0.27
CTTN-212ENST00000527962 NXF1Q9UBU9 619 aaKnown RBP16.73■□□□□ 0.27
CTTN-212ENST00000527962 UBE4BO95155 1302 aa16.72■□□□□ 0.27
CTTN-212ENST00000527962 A0A087X0B3 334 aa16.72■□□□□ 0.27
CTTN-212ENST00000527962 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.72■□□□□ 0.27
CTTN-212ENST00000527962 TCRBV21S2A2A0A5A6 115 aa16.72■□□□□ 0.27
CTTN-212ENST00000527962 PATE3B3GLJ2 98 aa16.72■□□□□ 0.27
CTTN-212ENST00000527962 GIPC1O14908 333 aa16.72■□□□□ 0.27
CTTN-212ENST00000527962 KIR2DL1P43626 348 aaPredicted RBP16.72■□□□□ 0.27
CTTN-212ENST00000527962 TUBP50607 506 aa16.72■□□□□ 0.27
CTTN-212ENST00000527962 CYP2J2P51589 502 aa16.72■□□□□ 0.27
CTTN-212ENST00000527962 KDSRQ06136 332 aa16.72■□□□□ 0.27
CTTN-212ENST00000527962 CYP24A1Q07973 514 aa16.72■□□□□ 0.27
CTTN-212ENST00000527962 LY6G5CQ5SRR4 150 aa16.72■□□□□ 0.27
CTTN-212ENST00000527962 SLC36A4Q6YBV0 504 aa16.72■□□□□ 0.27
CTTN-212ENST00000527962 TMEFF1Q8IYR6 380 aa16.72■□□□□ 0.27
CTTN-212ENST00000527962 HDDC3Q8N4P3 179 aa16.72■□□□□ 0.27
CTTN-212ENST00000527962 INTS4Q96HW7 963 aaKnown RBP16.72■□□□□ 0.27
CTTN-212ENST00000527962 ZNF396Q96N95 335 aaPredicted RBP16.72■□□□□ 0.27
CTTN-212ENST00000527962 ADAM33Q9BZ11 813 aa16.72■□□□□ 0.27
CTTN-212ENST00000527962 MAGEF1Q9HAY2 307 aa16.72■□□□□ 0.27
CTTN-212ENST00000527962 C1QTNF9BB2RNN3 333 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 SCAMP3O14828 347 aaKnown RBP16.71■□□□□ 0.27
CTTN-212ENST00000527962 SPTLC2O15270 562 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 COCHO43405 550 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 C1QTNF9P0C862 333 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 P4HA1P13674 534 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 MAPK8P45983 427 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 NASPP49321 788 aaPredicted RBP16.71■□□□□ 0.27
CTTN-212ENST00000527962 GFPT1Q06210 699 aaPredicted RBP16.71■□□□□ 0.27
CTTN-212ENST00000527962 GOLGA8FQ08AF8 430 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 GOLGA8DPQ0D2H9 430 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 BIRC3Q13489 604 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 ANO4Q32M45 955 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 SNX30Q5VWJ9 437 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 CNNM4Q6P4Q7 775 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 SLC23A3Q6PIS1 610 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 ARMCX6Q7L4S7 300 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 EPM2AIP1Q7L775 607 aaPredicted RBP16.71■□□□□ 0.27
CTTN-212ENST00000527962 ZNF513Q8N8E2 541 aaPredicted RBP16.71■□□□□ 0.27
CTTN-212ENST00000527962 KDF1Q8NAX2 398 aaPredicted RBP16.71■□□□□ 0.27
CTTN-212ENST00000527962 GLIS3Q8NEA6 775 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 GOLGA5Q8TBA6 731 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 HPS3Q969F9 1004 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 SMARCD1Q96GM5 515 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 DUSP9Q99956 384 aaKnown RBP16.71■□□□□ 0.27
CTTN-212ENST00000527962 B3GNT5Q9BYG0 378 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 DPEP3Q9H4B8 488 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 DMAP1Q9NPF5 467 aaPredicted RBP16.71■□□□□ 0.27
CTTN-212ENST00000527962 CHORDC1Q9UHD1 332 aaPredicted RBP16.71■□□□□ 0.27
CTTN-212ENST00000527962 ZMIZ1Q9ULJ6 1067 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 CFAP47Q6ZTR5 3102 aa16.71■□□□□ 0.27
CTTN-212ENST00000527962 LAMA1P25391 3075 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 CACNA1GO43497 2377 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 OBSL1O75147 1896 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 CLIC2O15247 247 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 HOXC11O43248 304 aaPredicted RBP16.7■□□□□ 0.26
CTTN-212ENST00000527962 TGFB1I1O43294 461 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 EXOC3O60645 756 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 PPP6R2O75170 966 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 ZNF217O75362 1048 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 CFIP05156 583 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 ENGP17813 658 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 PTGER3P43115 390 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 MYL6P60660 151 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 RPL6Q02878 288 aaKnown RBP16.7■□□□□ 0.26
CTTN-212ENST00000527962 DUOXA1Q1HG43 343 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 MAP7D1Q3KQU3 841 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 ZNF667Q5HYK9 610 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 EMC10Q5UCC4 262 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 DEFB124Q8NES8 71 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 DHX58Q96C10 678 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 XPO6Q96QU8 1125 aaKnown RBP16.7■□□□□ 0.26
CTTN-212ENST00000527962 FBXO44Q9H4M3 255 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 SPHK2Q9NRA0 654 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 SLC6A14Q9UN76 642 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 ZFHX4Q86UP3 3567 aa16.7■□□□□ 0.26
CTTN-212ENST00000527962 CLDN5O00501 218 aa16.69■□□□□ 0.26
CTTN-212ENST00000527962 TULP3O75386 442 aa16.69■□□□□ 0.26
CTTN-212ENST00000527962 HNRNPLP14866 589 aaKnown RBP eCLIP16.69■□□□□ 0.26
CTTN-212ENST00000527962 HOXD13P35453 343 aa16.69■□□□□ 0.26
CTTN-212ENST00000527962 SLC5A3P53794 718 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms