RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 DPEP3Q9H4B8 488 aa11.81□□□□□ -0.52
NR1H3-230ENST00000527949 GDPD2Q9HCC8 539 aa11.81□□□□□ -0.52
NR1H3-230ENST00000527949 CSNK1G1Q9HCP0 422 aa11.81□□□□□ -0.52
NR1H3-230ENST00000527949 PNPLA8Q9NP80 782 aa11.81□□□□□ -0.52
NR1H3-230ENST00000527949 DMAP1Q9NPF5 467 aaPredicted RBP11.81□□□□□ -0.52
NR1H3-230ENST00000527949 TMEM30AQ9NV96 361 aa11.81□□□□□ -0.52
NR1H3-230ENST00000527949 CIZ1Q9ULV3 898 aaPredicted RBP11.81□□□□□ -0.52
NR1H3-230ENST00000527949 TNFRSF10BO14763 440 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 AXIN1O15169 862 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 CETN3O15182 167 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 SLC16A3O15427 465 aaKnown RBP11.8□□□□□ -0.52
NR1H3-230ENST00000527949 KCNK5O95279 499 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 CKMP06732 381 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 ZDHHC11BP0C7U3 371 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 YWHAQP27348 245 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 PIK3CAP42336 1068 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 CDR1P51861 262 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 CDH8P55286 799 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 USP46P62068 366 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 FKBP3Q00688 224 aaKnown RBP11.8□□□□□ -0.52
NR1H3-230ENST00000527949 LRRC63Q05C16 580 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 TNK2Q07912 1038 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 PPP3CAQ08209 521 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 GRSF1Q12849 480 aaKnown RBP eCLIP11.8□□□□□ -0.52
NR1H3-230ENST00000527949 NR1H3Q13133 447 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 SRSF5Q13243 272 aaKnown RBP11.8□□□□□ -0.52
NR1H3-230ENST00000527949 FBXO43Q4G163 708 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 PLA2G2CQ5R387 149 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 KRT39Q6A163 491 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 C11orf74Q86VG3 221 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 FUKQ8N0W3 1084 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 CPA6Q8N4T0 437 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 STKLD1Q8NE28 680 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 RIN3Q8TB24 985 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 ATP2A3Q93084 1043 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 ZFYVE19Q96K21 471 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 SLC22A12Q96S37 553 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 NIF3L1Q9GZT8 377 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 SMG9Q9H0W8 520 aaKnown RBP11.8□□□□□ -0.52
NR1H3-230ENST00000527949 RBM12Q9NTZ6 932 aaKnown RBP11.8□□□□□ -0.52
NR1H3-230ENST00000527949 SLC8A2Q9UPR5 921 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 COQ4Q9Y3A0 265 aa11.8□□□□□ -0.52
NR1H3-230ENST00000527949 SPTBN2O15020 2390 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 CHD8Q9HCK8 2581 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 C2orf78A6NCI8 922 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 SLC9A3R1O14745 358 aaPredicted RBP11.79□□□□□ -0.52
NR1H3-230ENST00000527949 RHOBTB1O94844 696 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 EPB41P11171 864 aaKnown RBP11.79□□□□□ -0.52
NR1H3-230ENST00000527949 DRD1P21728 446 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 PRCPP42785 496 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 SOX9P48436 509 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 IFNAR2P48551 515 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 NDST1P52848 882 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 CACNA2D1P54289 1103 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 TAF10Q12962 218 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 PNOCQ13519 176 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 SF3A2Q15428 464 aaKnown RBP11.79□□□□□ -0.52
NR1H3-230ENST00000527949 ELF2Q15723 593 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 EML3Q32P44 896 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 WDR44Q5JSH3 913 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 DAB2IPQ5VWQ8 1189 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 RNF43Q68DV7 783 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 Q6ZS52 159 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 ARL14EPQ8N8R7 260 aaPredicted RBP11.79□□□□□ -0.52
NR1H3-230ENST00000527949 CCDC150Q8NCX0 1101 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 CCDC26Q8TAB7 109 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 SH3RF2Q8TEC5 729 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 CHFRQ96EP1 664 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 HNRNPABQ99729 332 aaKnown RBP11.79□□□□□ -0.52
NR1H3-230ENST00000527949 TSG101Q99816 390 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 NT5C1AQ9BXI3 368 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 FBXO44Q9H4M3 255 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 ECT2Q9H8V3 914 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 DUS2Q9NX74 493 aaKnown RBP11.79□□□□□ -0.52
NR1H3-230ENST00000527949 MAPK8IP1Q9UQF2 711 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 PCDHA5Q9Y5H7 936 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 USP24Q9UPU5 2620 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 MYH10P35580 1976 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 CHD6Q8TD26 2715 aa11.79□□□□□ -0.52
NR1H3-230ENST00000527949 CLDN5O00501 218 aa11.78□□□□□ -0.52
NR1H3-230ENST00000527949 PMM2O15305 246 aa11.78□□□□□ -0.52
NR1H3-230ENST00000527949 CILPO75339 1184 aa11.78□□□□□ -0.52
NR1H3-230ENST00000527949 NFATC1O95644 943 aa11.78□□□□□ -0.52
NR1H3-230ENST00000527949 TRIM49P0CI25 452 aa11.78□□□□□ -0.52
NR1H3-230ENST00000527949 TRIM49CP0CI26 452 aa11.78□□□□□ -0.52
NR1H3-230ENST00000527949 MPLP40238 635 aa11.78□□□□□ -0.52
NR1H3-230ENST00000527949 GCLMP48507 274 aa11.78□□□□□ -0.52
NR1H3-230ENST00000527949 PON2Q15165 354 aa11.78□□□□□ -0.52
NR1H3-230ENST00000527949 UNQ6494/PRO21346Q6UXR6 183 aa11.78□□□□□ -0.52
NR1H3-230ENST00000527949 ACOT1Q86TX2 421 aa11.78□□□□□ -0.52
NR1H3-230ENST00000527949 GPIHBP1Q8IV16 184 aa11.78□□□□□ -0.52
NR1H3-230ENST00000527949 ZNF276Q8N554 614 aa11.78□□□□□ -0.52
NR1H3-230ENST00000527949 KDF1Q8NAX2 398 aaPredicted RBP11.78□□□□□ -0.52
NR1H3-230ENST00000527949 FBXL13Q8NEE6 735 aa11.78□□□□□ -0.52
NR1H3-230ENST00000527949 ZMIZ2Q8NF64 920 aa11.78□□□□□ -0.52
NR1H3-230ENST00000527949 TAS1R2Q8TE23 839 aa11.78□□□□□ -0.52
NR1H3-230ENST00000527949 SMARCE1Q969G3 411 aa11.78□□□□□ -0.52
NR1H3-230ENST00000527949 OTUB2Q96DC9 234 aa11.78□□□□□ -0.52
NR1H3-230ENST00000527949 DHTKD1Q96HY7 919 aaPredicted RBP11.78□□□□□ -0.52
NR1H3-230ENST00000527949 CYP2S1Q96SQ9 504 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms