RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 GPRIN1Q7Z2K8 1008 aa16.43■□□□□ 0.22
CAPN1-213ENST00000527897 FILIP1Q7Z7B0 1213 aa16.43■□□□□ 0.22
CAPN1-213ENST00000527897 SLC35C1Q96A29 364 aa16.43■□□□□ 0.22
CAPN1-213ENST00000527897 FBXO44Q9H4M3 255 aa16.43■□□□□ 0.22
CAPN1-213ENST00000527897 CCSER2Q9H7U1 834 aa16.43■□□□□ 0.22
CAPN1-213ENST00000527897 ECT2Q9H8V3 914 aa16.43■□□□□ 0.22
CAPN1-213ENST00000527897 CSNK1G1Q9HCP0 422 aa16.43■□□□□ 0.22
CAPN1-213ENST00000527897 CFAP97Q9P2B7 532 aa16.43■□□□□ 0.22
CAPN1-213ENST00000527897 FRYLO94915 3013 aa16.42■□□□□ 0.22
CAPN1-213ENST00000527897 COCHO43405 550 aa16.42■□□□□ 0.22
CAPN1-213ENST00000527897 IRF1P10914 325 aa16.42■□□□□ 0.22
CAPN1-213ENST00000527897 ACO1P21399 889 aaKnown RBP16.42■□□□□ 0.22
CAPN1-213ENST00000527897 GJA4P35212 333 aa16.42■□□□□ 0.22
CAPN1-213ENST00000527897 FMO5P49326 533 aa16.42■□□□□ 0.22
CAPN1-213ENST00000527897 CCR3P51677 355 aa16.42■□□□□ 0.22
CAPN1-213ENST00000527897 SLC7A9P82251 487 aa16.42■□□□□ 0.22
CAPN1-213ENST00000527897 AMPD2Q01433 879 aa16.42■□□□□ 0.22
CAPN1-213ENST00000527897 SATB1Q01826 763 aa16.42■□□□□ 0.22
CAPN1-213ENST00000527897 GRSF1Q12849 480 aaKnown RBP eCLIP16.42■□□□□ 0.22
CAPN1-213ENST00000527897 NR1H3Q13133 447 aa16.42■□□□□ 0.22
CAPN1-213ENST00000527897 GAS6Q14393 721 aa16.42■□□□□ 0.22
CAPN1-213ENST00000527897 PPP2R5DQ14738 602 aa16.42■□□□□ 0.22
CAPN1-213ENST00000527897 EML3Q32P44 896 aa16.42■□□□□ 0.22
CAPN1-213ENST00000527897 DGKKQ5KSL6 1271 aa16.42■□□□□ 0.22
CAPN1-213ENST00000527897 NAIF1Q69YI7 327 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-213ENST00000527897 CREBRFQ8IUR6 639 aa16.42■□□□□ 0.22
CAPN1-213ENST00000527897 ATRIPQ8WXE1 791 aa16.42■□□□□ 0.22
CAPN1-213ENST00000527897 OVCA2Q8WZ82 227 aa16.42■□□□□ 0.22
CAPN1-213ENST00000527897 CHFRQ96EP1 664 aa16.42■□□□□ 0.22
CAPN1-213ENST00000527897 TMEM176AQ96HP8 235 aa16.42■□□□□ 0.22
CAPN1-213ENST00000527897 CYP26A1O43174 497 aa16.41■□□□□ 0.22
CAPN1-213ENST00000527897 NFATC1O95644 943 aa16.41■□□□□ 0.22
CAPN1-213ENST00000527897 CXCL12P48061 93 aa16.41■□□□□ 0.22
CAPN1-213ENST00000527897 RAD23BP54727 409 aa16.41■□□□□ 0.22
CAPN1-213ENST00000527897 MCCD1P59942 119 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-213ENST00000527897 CUL2Q13617 745 aa16.41■□□□□ 0.22
CAPN1-213ENST00000527897 ZNF528Q3MIS6 628 aa16.41■□□□□ 0.22
CAPN1-213ENST00000527897 TTC39CQ8N584 583 aa16.41■□□□□ 0.22
CAPN1-213ENST00000527897 SLC4A11Q8NBS3 891 aa16.41■□□□□ 0.22
CAPN1-213ENST00000527897 HINFPQ9BQA5 517 aa16.41■□□□□ 0.22
CAPN1-213ENST00000527897 SRRTQ9BXP5 876 aaKnown RBP16.41■□□□□ 0.22
CAPN1-213ENST00000527897 PRMT8Q9NR22 394 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-213ENST00000527897 TLR8Q9NR97 1041 aaKnown RBP16.41■□□□□ 0.22
CAPN1-213ENST00000527897 COMMD8Q9NX08 183 aa16.41■□□□□ 0.22
CAPN1-213ENST00000527897 KIAA1468Q9P260 1216 aa16.41■□□□□ 0.22
CAPN1-213ENST00000527897 COQ4Q9Y3A0 265 aa16.41■□□□□ 0.22
CAPN1-213ENST00000527897 CFAP54Q96N23 3096 aa16.41■□□□□ 0.22
CAPN1-213ENST00000527897 FANCMQ8IYD8 2048 aa16.4■□□□□ 0.22
CAPN1-213ENST00000527897 OLFM2O95897 454 aa16.4■□□□□ 0.22
CAPN1-213ENST00000527897 EGFP01133 1207 aa16.4■□□□□ 0.22
CAPN1-213ENST00000527897 LMNAP02545 664 aaKnown RBP16.4■□□□□ 0.22
CAPN1-213ENST00000527897 CD19P15391 556 aa16.4■□□□□ 0.22
CAPN1-213ENST00000527897 TCF3P15923 654 aa16.4■□□□□ 0.22
CAPN1-213ENST00000527897 PGFP49763 221 aa16.4■□□□□ 0.22
CAPN1-213ENST00000527897 GALK1P51570 392 aa16.4■□□□□ 0.22
CAPN1-213ENST00000527897 YWHAEP62258 255 aaKnown RBP16.4■□□□□ 0.22
CAPN1-213ENST00000527897 CETN1Q12798 172 aa16.4■□□□□ 0.22
CAPN1-213ENST00000527897 CCINQ13939 588 aa16.4■□□□□ 0.22
CAPN1-213ENST00000527897 FSTL4Q6MZW2 842 aa16.4■□□□□ 0.22
CAPN1-213ENST00000527897 DDX42Q86XP3 938 aaKnown RBP eCLIP16.4■□□□□ 0.22
CAPN1-213ENST00000527897 SPEM1Q8N4L4 309 aa16.4■□□□□ 0.22
CAPN1-213ENST00000527897 EXOC4Q96A65 974 aa16.4■□□□□ 0.22
CAPN1-213ENST00000527897 FAXDC2Q96IV6 333 aa16.4■□□□□ 0.22
CAPN1-213ENST00000527897 P2RY13Q9BPV8 354 aa16.4■□□□□ 0.22
CAPN1-213ENST00000527897 IER2Q9BTL4 223 aa16.4■□□□□ 0.22
CAPN1-213ENST00000527897 DUSP16Q9BY84 665 aa16.4■□□□□ 0.22
CAPN1-213ENST00000527897 FBRSL1Q9HCM7 1045 aaKnown RBP16.4■□□□□ 0.22
CAPN1-213ENST00000527897 ZSCAN32Q9NX65 697 aa16.4■□□□□ 0.22
CAPN1-213ENST00000527897 IL37Q9NZH6 218 aa16.4■□□□□ 0.22
CAPN1-213ENST00000527897 SH3BP1Q9Y3L3 701 aa16.4■□□□□ 0.22
CAPN1-213ENST00000527897 HHLA1C9JL84 531 aa16.39■□□□□ 0.21
CAPN1-213ENST00000527897 TRDMT1O14717 391 aaKnown RBP16.39■□□□□ 0.21
CAPN1-213ENST00000527897 TLR5O60602 858 aa16.39■□□□□ 0.21
CAPN1-213ENST00000527897 GOLGA7BQ2TAP0 167 aa16.39■□□□□ 0.21
CAPN1-213ENST00000527897 TMEM196Q5HYL7 178 aa16.39■□□□□ 0.21
CAPN1-213ENST00000527897 HEATR6Q6AI08 1181 aaKnown RBP16.39■□□□□ 0.21
CAPN1-213ENST00000527897 PPM1KQ8N3J5 372 aa16.39■□□□□ 0.21
CAPN1-213ENST00000527897 TRIML1Q8N9V2 468 aa16.39■□□□□ 0.21
CAPN1-213ENST00000527897 CD101Q93033 1021 aa16.39■□□□□ 0.21
CAPN1-213ENST00000527897 NT5C1BQ96P26 610 aa16.39■□□□□ 0.21
CAPN1-213ENST00000527897 SEMA4AQ9H3S1 761 aa16.39■□□□□ 0.21
CAPN1-213ENST00000527897 NUDT5Q9UKK9 219 aa16.39■□□□□ 0.21
CAPN1-213ENST00000527897 SCML2Q9UQR0 700 aa16.39■□□□□ 0.21
CAPN1-213ENST00000527897 PCDHGA2Q9Y5H1 932 aa16.39■□□□□ 0.21
CAPN1-213ENST00000527897 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.39■□□□□ 0.21
CAPN1-213ENST00000527897 MYOFQ9NZM1 2061 aa16.39■□□□□ 0.21
CAPN1-213ENST00000527897 A0A1W2PQH9 124 aa16.38■□□□□ 0.21
CAPN1-213ENST00000527897 FAM92AA1XBS5 289 aa16.38■□□□□ 0.21
CAPN1-213ENST00000527897 SLC9A3R1O14745 358 aaPredicted RBP16.38■□□□□ 0.21
CAPN1-213ENST00000527897 RNF40O75150 1001 aa16.38■□□□□ 0.21
CAPN1-213ENST00000527897 FGFR1OPO95684 399 aaKnown RBP16.38■□□□□ 0.21
CAPN1-213ENST00000527897 GNA14O95837 355 aa16.38■□□□□ 0.21
CAPN1-213ENST00000527897 TBX18O95935 607 aa16.38■□□□□ 0.21
CAPN1-213ENST00000527897 ZDHHC11BP0C7U3 371 aa16.38■□□□□ 0.21
CAPN1-213ENST00000527897 TBXAS1P24557 533 aaPredicted RBP16.38■□□□□ 0.21
CAPN1-213ENST00000527897 TUBP50607 506 aa16.38■□□□□ 0.21
CAPN1-213ENST00000527897 NRLP54845 237 aa16.38■□□□□ 0.21
CAPN1-213ENST00000527897 SLC8A3P57103 927 aa16.38■□□□□ 0.21
CAPN1-213ENST00000527897 KCNH2Q12809 1159 aa16.38■□□□□ 0.21
CAPN1-213ENST00000527897 SNX30Q5VWJ9 437 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms