RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 NTRK1P04629 796 aa14.49□□□□□ -0.09
SSRP1-203ENST00000526696 MAPTP10636 758 aaKnown RBP14.49□□□□□ -0.09
SSRP1-203ENST00000526696 PAX3P23760 479 aa14.49□□□□□ -0.09
SSRP1-203ENST00000526696 KRT2P35908 639 aa14.49□□□□□ -0.09
SSRP1-203ENST00000526696 GRK6P43250 576 aa14.49□□□□□ -0.09
SSRP1-203ENST00000526696 CSNK1EP49674 416 aaKnown RBP14.49□□□□□ -0.09
SSRP1-203ENST00000526696 USP46P62068 366 aa14.49□□□□□ -0.09
SSRP1-203ENST00000526696 RPL10AP62906 217 aaKnown RBP14.49□□□□□ -0.09
SSRP1-203ENST00000526696 USP49Q70CQ1 688 aa14.49□□□□□ -0.09
SSRP1-203ENST00000526696 KIAA1958Q8N8K9 716 aa14.49□□□□□ -0.09
SSRP1-203ENST00000526696 TERB1Q8NA31 727 aa14.49□□□□□ -0.09
SSRP1-203ENST00000526696 TMEM176AQ96HP8 235 aa14.49□□□□□ -0.09
SSRP1-203ENST00000526696 GABRG3Q99928 467 aa14.49□□□□□ -0.09
SSRP1-203ENST00000526696 NTPCRQ9BSD7 190 aaKnown RBP14.49□□□□□ -0.09
SSRP1-203ENST00000526696 TRIM4Q9C037 500 aa14.49□□□□□ -0.09
SSRP1-203ENST00000526696 CCSER1Q9C0I3 900 aa14.49□□□□□ -0.09
SSRP1-203ENST00000526696 CPNE5Q9HCH3 593 aa14.49□□□□□ -0.09
SSRP1-203ENST00000526696 ABCB6Q9NP58 842 aa14.49□□□□□ -0.09
SSRP1-203ENST00000526696 CFAP97Q9P2B7 532 aa14.49□□□□□ -0.09
SSRP1-203ENST00000526696 IL17BQ9UHF5 180 aa14.49□□□□□ -0.09
SSRP1-203ENST00000526696 EIF2B4Q9UI10 523 aaKnown RBP14.49□□□□□ -0.09
SSRP1-203ENST00000526696 STARD13Q9Y3M8 1113 aa14.49□□□□□ -0.09
SSRP1-203ENST00000526696 SNX11Q9Y5W9 270 aa14.49□□□□□ -0.09
SSRP1-203ENST00000526696 RELNP78509 3460 aa14.48□□□□□ -0.09
SSRP1-203ENST00000526696 DOPEY1Q5JWR5 2465 aa14.48□□□□□ -0.09
SSRP1-203ENST00000526696 METTL12A8MUP2 240 aa14.48□□□□□ -0.09
SSRP1-203ENST00000526696 HCRTO43612 131 aa14.48□□□□□ -0.09
SSRP1-203ENST00000526696 ACAT1P24752 427 aaKnown RBP14.48□□□□□ -0.09
SSRP1-203ENST00000526696 MATR3P43243 847 aaKnown RBP eCLIP14.48□□□□□ -0.09
SSRP1-203ENST00000526696 STRN3Q13033 797 aa14.48□□□□□ -0.09
SSRP1-203ENST00000526696 PDIA5Q14554 519 aa14.48□□□□□ -0.09
SSRP1-203ENST00000526696 SUZ12Q15022 739 aaKnown RBP14.48□□□□□ -0.09
SSRP1-203ENST00000526696 NFE2Q16621 373 aaPredicted RBP14.48□□□□□ -0.09
SSRP1-203ENST00000526696 ARHGAP40Q5TG30 622 aa14.48□□□□□ -0.09
SSRP1-203ENST00000526696 KIAA1324Q6UXG2 1013 aaKnown RBP14.48□□□□□ -0.09
SSRP1-203ENST00000526696 FSIP1Q8NA03 581 aa14.48□□□□□ -0.09
SSRP1-203ENST00000526696 FAM212AQ96EL1 285 aa14.48□□□□□ -0.09
SSRP1-203ENST00000526696 RPF1Q9H9Y2 349 aaKnown RBP14.48□□□□□ -0.09
SSRP1-203ENST00000526696 USP36Q9P275 1121 aaKnown RBP14.48□□□□□ -0.09
SSRP1-203ENST00000526696 KIAA1024Q9UPX6 916 aa14.48□□□□□ -0.09
SSRP1-203ENST00000526696 ABCA12Q86UK0 2595 aa14.48□□□□□ -0.09
SSRP1-203ENST00000526696 WASH3PC4AMC7 463 aa14.47□□□□□ -0.09
SSRP1-203ENST00000526696 SLC9A3R1O14745 358 aaPredicted RBP14.47□□□□□ -0.09
SSRP1-203ENST00000526696 PCDHGA12O60330 932 aa14.47□□□□□ -0.09
SSRP1-203ENST00000526696 CTDNEP1O95476 244 aa14.47□□□□□ -0.09
SSRP1-203ENST00000526696 XBP1P17861 261 aa14.47□□□□□ -0.09
SSRP1-203ENST00000526696 MUTP22033 750 aa14.47□□□□□ -0.09
SSRP1-203ENST00000526696 MCM7P33993 719 aa14.47□□□□□ -0.09
SSRP1-203ENST00000526696 TAF6P49848 677 aa14.47□□□□□ -0.09
SSRP1-203ENST00000526696 TSPY1Q01534 308 aa14.47□□□□□ -0.09
SSRP1-203ENST00000526696 KCNT1Q5JUK3 1230 aa14.47□□□□□ -0.09
SSRP1-203ENST00000526696 CPLX2Q6PUV4 134 aaKnown RBP14.47□□□□□ -0.09
SSRP1-203ENST00000526696 CHPFQ8IZ52 775 aa14.47□□□□□ -0.09
SSRP1-203ENST00000526696 CADM4Q8NFZ8 388 aa14.47□□□□□ -0.09
SSRP1-203ENST00000526696 ERMNQ8TAM6 284 aa14.47□□□□□ -0.09
SSRP1-203ENST00000526696 TSPAN18Q96SJ8 248 aa14.47□□□□□ -0.09
SSRP1-203ENST00000526696 DEC1Q9P2X7 70 aa14.47□□□□□ -0.09
SSRP1-203ENST00000526696 GTF3C4Q9UKN8 822 aa14.47□□□□□ -0.09
SSRP1-203ENST00000526696 PCDHGA1Q9Y5H4 931 aa14.47□□□□□ -0.09
SSRP1-203ENST00000526696 MYH10P35580 1976 aa14.47□□□□□ -0.09
SSRP1-203ENST00000526696 SPTBN1Q01082 2364 aaKnown RBP14.46□□□□□ -0.09
SSRP1-203ENST00000526696 ZNF840PA6NDX5 716 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 E9PMD0 336 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 HOXC11O43248 304 aaPredicted RBP14.46□□□□□ -0.09
SSRP1-203ENST00000526696 OAS1P00973 400 aaKnown RBP14.46□□□□□ -0.09
SSRP1-203ENST00000526696 FDPSP14324 419 aaKnown RBP14.46□□□□□ -0.09
SSRP1-203ENST00000526696 PFKLP17858 780 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 HNF1BP35680 557 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 CCT6AP40227 531 aaKnown RBP14.46□□□□□ -0.09
SSRP1-203ENST00000526696 IL9RQ01113 521 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 GAD2Q05329 585 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 DNAJC3Q13217 504 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 TMEM132DQ14C87 1099 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 SF3A1Q15459 793 aaKnown RBP14.46□□□□□ -0.09
SSRP1-203ENST00000526696 TBC1D25Q3MII6 688 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 INTS6LQ5JSJ4 861 aaKnown RBP14.46□□□□□ -0.09
SSRP1-203ENST00000526696 HES3Q5TGS1 186 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 SCARA3Q6AZY7 606 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 RINT1Q6NUQ1 792 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 LAYNQ6UX15 382 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 C1orf186Q6ZWK4 172 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 RUFY3Q7L099 469 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 OSTM1Q86WC4 334 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 SCN4BQ8IWT1 228 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 PDCL2Q8N4E4 241 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 SPIRE2Q8WWL2 714 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 NAF1Q96HR8 494 aaKnown RBP14.46□□□□□ -0.09
SSRP1-203ENST00000526696 ZFRQ96KR1 1074 aaKnown RBP14.46□□□□□ -0.09
SSRP1-203ENST00000526696 DRC1Q96MC2 740 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 MKRN2Q9H000 416 aaKnown RBP14.46□□□□□ -0.09
SSRP1-203ENST00000526696 DDX19AQ9NUU7 478 aaKnown RBP14.46□□□□□ -0.09
SSRP1-203ENST00000526696 NXF1Q9UBU9 619 aaKnown RBP14.46□□□□□ -0.09
SSRP1-203ENST00000526696 FTSJ1Q9UET6 329 aa14.46□□□□□ -0.09
SSRP1-203ENST00000526696 PRRT4C9JH25 899 aa14.45□□□□□ -0.1
SSRP1-203ENST00000526696 H0Y8X5 98 aa14.45□□□□□ -0.1
SSRP1-203ENST00000526696 ZBTB24O43167 697 aaPredicted RBP14.45□□□□□ -0.1
SSRP1-203ENST00000526696 ADSSP30520 456 aa14.45□□□□□ -0.1
SSRP1-203ENST00000526696 PDE6CP51160 858 aa14.45□□□□□ -0.1
SSRP1-203ENST00000526696 CFAP221Q4G0U5 840 aa14.45□□□□□ -0.1
SSRP1-203ENST00000526696 FBXL19Q6PCT2 694 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms