RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 TGFB2P61812 414 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 GPS1Q13098 491 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 C9orf131Q5VYM1 1079 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 SLC9A4Q6AI14 798 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 FGD2Q7Z6J4 655 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 SNX32Q86XE0 403 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 RFFLQ8WZ73 363 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 C9orf72Q96LT7 481 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 NYAP2Q9P242 653 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 ASB14A6NK59 587 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 GAS2O43903 313 aaKnown RBP12.78□□□□□ -0.36
FGFR1-227ENST00000526570 RASA1P20936 1047 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 CSTF3Q12996 717 aaKnown RBP12.78□□□□□ -0.36
FGFR1-227ENST00000526570 NUP93Q8N1F7 819 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 APPL2Q8NEU8 664 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 ZNF668Q96K58 619 aaPredicted RBP12.78□□□□□ -0.36
FGFR1-227ENST00000526570 KLHL3Q9UH77 587 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 GPR75-ASB3A0A0A6YYF3 556 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 SSU72P8A0A1W2PR75 194 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 UNC5CO95185 931 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 FAM228BP0C875 321 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 DRD4P21917 467 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 AKAP5P24588 427 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 SFNP31947 248 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 FLT3P36888 993 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 NCKAP1LP55160 1127 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 ITKQ08881 620 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 SNX17Q15036 470 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 C5orf22Q49AR2 442 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 LACTB2Q53H82 288 aaPredicted RBP12.78□□□□□ -0.36
FGFR1-227ENST00000526570 SLFN12LQ6IEE8 588 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 PHC3Q8NDX5 983 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 TTC8Q8TAM2 541 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 LPAR1Q92633 364 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 POLR1BQ9H9Y6 1135 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 INPP5FQ9Y2H2 1132 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 CAPN6Q9Y6Q1 641 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 A8MUI8 341 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 FOXN3O00409 490 aaPredicted RBP12.78□□□□□ -0.36
FGFR1-227ENST00000526570 MGRN1O60291 552 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 PSMB9P28065 219 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 TALDO1P37837 337 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 POTEGQ6S5H5 508 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 PRUNE1Q86TP1 453 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 ANKMY2Q8IV38 441 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 CCDC36Q8IYA8 594 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 MCPH1Q8NEM0 835 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 HDHD2Q9H0R4 259 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 TAGLN3Q9UI15 199 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 P4HBP07237 508 aaKnown RBP12.78□□□□□ -0.36
FGFR1-227ENST00000526570 ZNF12P17014 697 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 TSGA10IPQ3SY00 556 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 SYDE1Q6ZW31 735 aaPredicted RBP12.78□□□□□ -0.36
FGFR1-227ENST00000526570 RHPN2Q8IUC4 686 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 CD302Q8IX05 232 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 RAET1EQ8TD07 263 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 NAT14Q8WUY8 206 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 CENPTQ96BT3 561 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 PLEKHA8Q96JA3 519 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 WDR12Q9GZL7 423 aaKnown RBP12.78□□□□□ -0.36
FGFR1-227ENST00000526570 GDF3Q9NR23 364 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 ING3Q9NXR8 418 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 CROTQ9UKG9 612 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 PCDHGC5Q9Y5F6 944 aa12.78□□□□□ -0.36
FGFR1-227ENST00000526570 TMEM247A6NEH6 219 aa12.77□□□□□ -0.36
FGFR1-227ENST00000526570 SLC16A4O15374 487 aa12.77□□□□□ -0.36
FGFR1-227ENST00000526570 ENTPD5O75356 428 aa12.77□□□□□ -0.36
FGFR1-227ENST00000526570 GRSF1Q12849 480 aaKnown RBP eCLIP12.77□□□□□ -0.36
FGFR1-227ENST00000526570 UNC13DQ70J99 1090 aa12.77□□□□□ -0.36
FGFR1-227ENST00000526570 PPHLN1Q8NEY8 458 aaKnown RBP12.77□□□□□ -0.36
FGFR1-227ENST00000526570 TOR1AIP2Q8NFQ8 470 aa12.77□□□□□ -0.36
FGFR1-227ENST00000526570 WDR36Q8NI36 951 aaKnown RBP12.77□□□□□ -0.36
FGFR1-227ENST00000526570 PREBQ9HCU5 417 aa12.77□□□□□ -0.36
FGFR1-227ENST00000526570 CHKBQ9Y259 395 aa12.77□□□□□ -0.36
FGFR1-227ENST00000526570 PHKA2P46019 1235 aa12.77□□□□□ -0.37
FGFR1-227ENST00000526570 GRIK3Q13003 919 aa12.77□□□□□ -0.37
FGFR1-227ENST00000526570 PDK3Q15120 406 aa12.77□□□□□ -0.37
FGFR1-227ENST00000526570 SURF1Q15526 300 aa12.77□□□□□ -0.37
FGFR1-227ENST00000526570 PPP4R3CPQ6ZMV5 832 aa12.77□□□□□ -0.37
FGFR1-227ENST00000526570 CCDC33Q8N5R6 958 aa12.77□□□□□ -0.37
FGFR1-227ENST00000526570 RBM15Q96T37 977 aaKnown RBP eCLIP12.77□□□□□ -0.378e-6■■■■■ 30.1
FGFR1-227ENST00000526570 VPS4AQ9UN37 437 aa12.77□□□□□ -0.37
FGFR1-227ENST00000526570 MAP2P11137 1827 aaKnown RBP12.77□□□□□ -0.37
FGFR1-227ENST00000526570 MROH1Q8NDA8 1641 aa12.77□□□□□ -0.37
FGFR1-227ENST00000526570 PP2D1A8MPX8 630 aa12.77□□□□□ -0.37
FGFR1-227ENST00000526570 EIF3DO15371 548 aaKnown RBP eCLIP12.77□□□□□ -0.37
FGFR1-227ENST00000526570 TCF3P15923 654 aa12.77□□□□□ -0.37
FGFR1-227ENST00000526570 PRKACAP17612 351 aa12.77□□□□□ -0.37
FGFR1-227ENST00000526570 PMLP29590 882 aa12.77□□□□□ -0.37
FGFR1-227ENST00000526570 RAD23AP54725 363 aa12.77□□□□□ -0.37
FGFR1-227ENST00000526570 HUNKP57058 714 aa12.77□□□□□ -0.37
FGFR1-227ENST00000526570 QPCTQ16769 361 aa12.77□□□□□ -0.37
FGFR1-227ENST00000526570 ZNF57Q68EA5 555 aaPredicted RBP12.77□□□□□ -0.37
FGFR1-227ENST00000526570 TAF2Q6P1X5 1199 aa12.77□□□□□ -0.37
FGFR1-227ENST00000526570 NECAB2Q7Z6G3 386 aa12.77□□□□□ -0.37
FGFR1-227ENST00000526570 ELOA2Q8IYF1 753 aaPredicted RBP12.77□□□□□ -0.37
FGFR1-227ENST00000526570 AGR3Q8TD06 166 aa12.77□□□□□ -0.37
FGFR1-227ENST00000526570 PDCD6IPQ8WUM4 868 aaKnown RBP12.77□□□□□ -0.37
FGFR1-227ENST00000526570 DHX38Q92620 1227 aaKnown RBP12.77□□□□□ -0.37
FGFR1-227ENST00000526570 FAM149B1Q96BN6 582 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms