RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 SIX1Q15475 284 aaPredicted RBP20.81■□□□□ 0.92
PPP1CA-204ENST00000526510 HFE2Q6ZVN8 426 aa20.81■□□□□ 0.92
PPP1CA-204ENST00000526510 ZNF365Q70YC5 407 aa20.81■□□□□ 0.92
PPP1CA-204ENST00000526510 BHLHA9Q7RTU4 235 aa20.81■□□□□ 0.92
PPP1CA-204ENST00000526510 POLNQ7Z5Q5 900 aa20.81■□□□□ 0.92
PPP1CA-204ENST00000526510 CMTR2Q8IYT2 770 aaKnown RBP20.81■□□□□ 0.92
PPP1CA-204ENST00000526510 KRT12Q99456 494 aa20.81■□□□□ 0.92
PPP1CA-204ENST00000526510 TTPALQ9BTX7 342 aa20.81■□□□□ 0.92
PPP1CA-204ENST00000526510 DDX23Q9BUQ8 820 aaKnown RBP20.81■□□□□ 0.92
PPP1CA-204ENST00000526510 OR6C75A6NL08 312 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 PI4K2BG5E9Z4 385 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 FSCN2O14926 492 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 RNF8O76064 485 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 ZRANB2O95218 330 aaKnown RBP eCLIP20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 TRUB2O95900 331 aaKnown RBP20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 SDC4P31431 198 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 PCK1P35558 622 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 PTPN9P43378 593 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 PPIGQ13427 754 aaKnown RBP eCLIP20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 CDO1Q16878 200 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 PRSS55Q6UWB4 352 aaPredicted RBP20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 HDAC7Q8WUI4 952 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 RAPGEF5Q92565 580 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 NAP1L3Q99457 506 aaPredicted RBP20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 PARD6BQ9BYG5 372 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 ZWILCHQ9H900 591 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 CNGB3Q9NQW8 809 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 ABI2Q9NYB9 513 aaPredicted RBP20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 PCSK1NQ9UHG2 260 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 HSF2BPO75031 334 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 DAB1O75553 588 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 FBXO21O94952 628 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 KRT1P04264 644 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 FYNP06241 537 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 USP17L7P0C7H9 530 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 FPGSQ05932 587 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 BTG3Q14201 252 aaPredicted RBP20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 SMTNL2Q2TAL5 461 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 KCNT1Q5JUK3 1230 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 SPOUT1Q5T280 376 aaKnown RBP20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 KLHL7Q8IXQ5 586 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 C7orf61Q8IZ16 206 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 DEFB106AQ8N104 65 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 FAM172AQ8WUF8 416 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 CENPIQ92674 756 aaPredicted RBP20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 RNF25Q96BH1 459 aaPredicted RBP20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 PGLYRP2Q96PD5 576 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 SLITRK1Q96PX8 696 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 DDX47Q9H0S4 455 aaKnown RBP20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 PNPLA8Q9NP80 782 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 PRKAG2Q9UGJ0 569 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 USP18Q9UMW8 372 aa20.8■□□□□ 0.92
PPP1CA-204ENST00000526510 PLXNA4Q9HCM2 1894 aa20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 C3orf70A6NLC5 250 aaPredicted RBP20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 YJEFN3A6XGL0 299 aa20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 E7ENQ6 273 aa20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 CCDC188H7C350 402 aa20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 TNFRSF10BO14763 440 aa20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 VNN2O95498 520 aa20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 FGBP02675 491 aa20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 YWHAZP63104 245 aaKnown RBP20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 CLUL1Q15846 466 aa20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 NFE2Q16621 373 aaPredicted RBP20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 MFSD7Q6UXD7 560 aa20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 RCOR2Q8IZ40 523 aa20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 SLC39A11Q8N1S5 342 aa20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 PRELID2Q8N945 189 aa20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 COLGALT1Q8NBJ5 622 aa20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 FAM149B1Q96BN6 582 aa20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 ZNF558Q96NG5 402 aa20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 SLC2A13Q96QE2 648 aa20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 PLVAPQ9BX97 442 aa20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 DDX56Q9NY93 547 aaKnown RBP20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 CALCOCO1Q9P1Z2 691 aa20.79■□□□□ 0.92
PPP1CA-204ENST00000526510 ZBED1O96006 694 aa20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 RARAP10276 462 aa20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 RALAP11233 206 aa20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 GRIK1P39086 918 aa20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 MATKP42679 507 aa20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 HDAC4P56524 1084 aa20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 PITX1P78337 314 aaPredicted RBP20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 HADHQ16836 314 aaKnown RBP20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 TMEM240Q5SV17 173 aa20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 OTUD1Q5VV17 481 aaPredicted RBP20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 PM20D1Q6GTS8 502 aa20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 ANKS3Q6ZW76 656 aa20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 CCDC50Q8IVM0 306 aa20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 TTC9BQ8N6N2 239 aa20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 SCAMP5Q8TAC9 235 aa20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 FUBP3Q96I24 572 aaKnown RBP eCLIP20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 NGRNQ9NPE2 291 aaKnown RBP20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 CHST7Q9NS84 486 aa20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 CXXC1Q9P0U4 656 aaPredicted RBP20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 DMGDHQ9UI17 866 aaKnown RBP20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 PCDHB5Q9Y5E4 795 aa20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 USP3Q9Y6I4 520 aa20.78■□□□□ 0.92
PPP1CA-204ENST00000526510 ZBBXA8MT70 800 aa20.77■□□□□ 0.92
PPP1CA-204ENST00000526510 H7C4K7 107 aa20.77■□□□□ 0.92
PPP1CA-204ENST00000526510 ADAM12O43184 909 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms