RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 ARHGEF3Q9NR81 526 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 ST7Q9NRC1 585 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 FAM207AQ9NSI2 230 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 GMIPQ9P107 970 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 WNT16Q9UBV4 365 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 NAGPAQ9UK23 515 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 LSM7Q9UK45 103 aaKnown RBP5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 STRIP2Q9ULQ0 834 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 CA14Q9ULX7 337 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 ARHGAP26Q9UNA1 814 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 CNTN6Q9UQ52 1028 aa5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 MRPS17Q9Y2R5 130 aaKnown RBP5.69□□□□□ -1.5
HMGB1P40-201ENST00000525121 BRWD1Q9NSI6 2320 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 FAM92AA1XBS5 289 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 C2orf78A6NCI8 922 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 FAM86C2PA6NEL3 165 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 F8VZ95 297 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 MAN2B1O00754 1011 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 TNFRSF10BO14763 440 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 CHADO15335 359 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 CYP26A1O43174 497 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 NARSO43776 548 aaKnown RBP5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 GPR37L1O60883 481 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 TADA3O75528 432 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 BEST1O76090 585 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 PRAMEF12O95522 483 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZBED1O96006 694 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 OAS1P00973 400 aaKnown RBP5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 ATP1A3P13637 1013 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 LCP1P13796 627 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 FCARP24071 287 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 ATP5C1P36542 298 aaKnown RBP5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 STAT1P42224 750 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 KIF11P52732 1056 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 POLR2FP61218 127 aaKnown RBP5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 YWHAGP61981 247 aaKnown RBP eCLIP5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 GPC5P78333 572 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 APBA1Q02410 837 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 PRKCQQ04759 706 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 FCHO2Q0JRZ9 810 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 ADIGQ0VDE8 80 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 NR1H3Q13133 447 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 MTF1Q14872 753 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 DRAP1Q14919 205 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 NCAPHQ15003 741 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 MLF2Q15773 248 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 KLHDC7AQ5VTJ3 777 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 BTBD8Q5XKL5 378 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZNF852Q6ZMS4 543 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 TPRG1Q6ZUI0 275 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 GPRIN1Q7Z2K8 1008 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 TMEM150AQ86TG1 271 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 LUZP1Q86V48 1076 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 TTC30AQ86WT1 665 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 FBXL6Q8N531 539 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 KIAA1958Q8N8K9 716 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZMIZ2Q8NF64 920 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 FLCNQ8NFG4 579 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 ST13P5Q8NFI4 369 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 SH3RF2Q8TEC5 729 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 KCTD13Q8WZ19 329 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 TFAP2BQ92481 460 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 KHSRPQ92945 711 aaKnown RBP eCLIP5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 USP13Q92995 863 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 ATP2A3Q93084 1043 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 HSFY1Q96LI6 401 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 ERGIC2Q96RQ1 377 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 FUCA2Q9BTY2 467 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 STK33Q9BYT3 514 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 ULBP1Q9BZM6 244 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 MIS12Q9H081 205 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 SMG9Q9H0W8 520 aaKnown RBP5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 C8orf33Q9H7E9 229 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 CBX8Q9HC52 389 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 SIX2Q9NPC8 291 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 TRPV5Q9NQA5 729 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 CNGB3Q9NQW8 809 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 OLA1Q9NTK5 396 aaKnown RBP5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 TMEM30AQ9NV96 361 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 DUS2Q9NX74 493 aaKnown RBP5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 SMPD4Q9NXE4 827 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 CLIC5Q9NZA1 410 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 IL37Q9NZH6 218 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 CHORDC1Q9UHD1 332 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 DNMT3LQ9UJW3 386 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 SH3BP1Q9Y3L3 701 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 HCN4Q9Y3Q4 1203 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 FHOD1Q9Y613 1164 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 CPQQ9Y646 472 aa5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 MTCL1Q9Y4B5 1905 aaKnown RBP5.68□□□□□ -1.5
HMGB1P40-201ENST00000525121 C2orf16Q68DN1 1984 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 TCF20Q9UGU0 1960 aaKnown RBP5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 COL6A3P12111 3177 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 A0A1W2PQC6 194 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 A0A1W2PQH9 124 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 E2F8A0AVK6 867 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 LRRC10BA6NIK2 292 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 HHLA1C9JL84 531 aa5.67□□□□□ -1.5
HMGB1P40-201ENST00000525121 RNF225M0QZC1 329 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms