RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 TLR8Q9NR97 1041 aaKnown RBP22.07■■□□□ 1.12
TRAPPC9-215ENST00000524162 GKN1Q9NS71 199 aa22.07■■□□□ 1.12
TRAPPC9-215ENST00000524162 USP3Q9Y6I4 520 aa22.07■■□□□ 1.12
TRAPPC9-215ENST00000524162 FAM170BA6NMN3 283 aa22.06■■□□□ 1.12
TRAPPC9-215ENST00000524162 AMPD2Q01433 879 aa22.06■■□□□ 1.12
TRAPPC9-215ENST00000524162 TPD52L1Q16890 204 aaPredicted RBP22.06■■□□□ 1.12
TRAPPC9-215ENST00000524162 SGO2Q562F6 1265 aa22.06■■□□□ 1.12
TRAPPC9-215ENST00000524162 HECTD3Q5T447 861 aa22.06■■□□□ 1.12
TRAPPC9-215ENST00000524162 CCDC186Q7Z3E2 898 aa22.06■■□□□ 1.12
TRAPPC9-215ENST00000524162 PPM1KQ8N3J5 372 aa22.06■■□□□ 1.12
TRAPPC9-215ENST00000524162 OSCP1Q8WVF1 389 aa22.06■■□□□ 1.12
TRAPPC9-215ENST00000524162 FOXQ1Q9C009 403 aa22.06■■□□□ 1.12
TRAPPC9-215ENST00000524162 RNF38Q9H0F5 515 aa22.06■■□□□ 1.12
TRAPPC9-215ENST00000524162 CYLDQ9NQC7 956 aa22.06■■□□□ 1.12
TRAPPC9-215ENST00000524162 FANCMQ8IYD8 2048 aa22.06■■□□□ 1.12
TRAPPC9-215ENST00000524162 RUNX3Q13761 415 aa22.05■■□□□ 1.12
TRAPPC9-215ENST00000524162 MAN2A1Q16706 1144 aa22.05■■□□□ 1.12
TRAPPC9-215ENST00000524162 RAB41Q5JT25 222 aa22.05■■□□□ 1.12
TRAPPC9-215ENST00000524162 KLHDC10Q6PID8 442 aa22.05■■□□□ 1.12
TRAPPC9-215ENST00000524162 SH3RF2Q8TEC5 729 aa22.05■■□□□ 1.12
TRAPPC9-215ENST00000524162 FAM3CQ92520 227 aa22.05■■□□□ 1.12
TRAPPC9-215ENST00000524162 VPS13AQ96RL7 3174 aa22.05■■□□□ 1.12
TRAPPC9-215ENST00000524162 SPECC1L-ADORA2AF8WAN1 911 aa22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 SLC9A3R1O14745 358 aaPredicted RBP22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 TARSP26639 723 aaKnown RBP22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 CTHP32929 405 aa22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 ZNF132P52740 706 aa22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 BCAT1P54687 386 aa22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 LRMPQ12912 555 aa22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 FZD5Q13467 585 aa22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 UBXN2BQ14CS0 331 aa22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 MEA1Q16626 185 aa22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 GBP6Q6ZN66 633 aa22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 GPIHBP1Q8IV16 184 aa22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 RIN3Q8TB24 985 aa22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 ENOX1Q8TC92 643 aaKnown RBP22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 ATP2A3Q93084 1043 aa22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 ZFYVE19Q96K21 471 aa22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 INTS2Q9H0H0 1204 aaKnown RBP22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 HPS4Q9NQG7 708 aa22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 GTSE1Q9NYZ3 720 aa22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 CLIC5Q9NZA1 410 aa22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 CHORDC1Q9UHD1 332 aaPredicted RBP22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 COL4A3Q01955 1670 aa22.04■■□□□ 1.12
TRAPPC9-215ENST00000524162 O00370 1275 aa22.03■■□□□ 1.12
TRAPPC9-215ENST00000524162 SETSIPP0DME0 302 aa22.03■■□□□ 1.12
TRAPPC9-215ENST00000524162 EEF1GP26641 437 aaKnown RBP22.03■■□□□ 1.12
TRAPPC9-215ENST00000524162 KPNA1P52294 538 aaPredicted RBP22.03■■□□□ 1.12
TRAPPC9-215ENST00000524162 NHLH1Q02575 133 aa22.03■■□□□ 1.12
TRAPPC9-215ENST00000524162 TRIM65Q6PJ69 517 aa22.03■■□□□ 1.12
TRAPPC9-215ENST00000524162 TMEM270Q6UE05 265 aa22.03■■□□□ 1.12
TRAPPC9-215ENST00000524162 LCLAT1Q6UWP7 414 aa22.03■■□□□ 1.12
TRAPPC9-215ENST00000524162 SCML4Q8N228 414 aa22.03■■□□□ 1.12
TRAPPC9-215ENST00000524162 EXOC4Q96A65 974 aa22.03■■□□□ 1.12
TRAPPC9-215ENST00000524162 FAM122AQ96E09 287 aa22.03■■□□□ 1.12
TRAPPC9-215ENST00000524162 CDK5RAP1Q96SZ6 601 aaKnown RBP22.03■■□□□ 1.12
TRAPPC9-215ENST00000524162 GMIPQ9P107 970 aa22.03■■□□□ 1.12
TRAPPC9-215ENST00000524162 HESX1Q9UBX0 185 aa22.03■■□□□ 1.12
TRAPPC9-215ENST00000524162 TSPAN16Q9UKR8 245 aa22.03■■□□□ 1.12
TRAPPC9-215ENST00000524162 MTF2Q9Y483 593 aaPredicted RBP22.03■■□□□ 1.12
TRAPPC9-215ENST00000524162 E2F8A0AVK6 867 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 LEFTY2O00292 366 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 XPO1O14980 1071 aaKnown RBP22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 COCHO43405 550 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 DCNP07585 359 aaKnown RBP22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 CD72P21854 359 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 MTIF2P46199 727 aaKnown RBP22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 ZXDBP98169 803 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 BST2Q10589 180 aaKnown RBP22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 IFRD2Q12894 506 aaPredicted RBP22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 CNGA2Q16280 664 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 EXOC3L4Q17RC7 722 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 EML3Q32P44 896 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 PKDCCQ504Y2 493 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 DGKKQ5KSL6 1271 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 CCDC183Q5T5S1 534 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 GPRIN1Q7Z2K8 1008 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 TADA2BQ86TJ2 420 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 PIGZQ86VD9 579 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 TTC30AQ86WT1 665 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 ARHGAP18Q8N392 663 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 SYNPOQ8N3V7 929 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 CPA6Q8N4T0 437 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 KCTD13Q8WZ19 329 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 OTUB2Q96DC9 234 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 KREMEN1Q96MU8 473 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 DUS2Q9NX74 493 aaKnown RBP22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 TBC1D14Q9P2M4 693 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 PCDHB4Q9Y5E5 795 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 CPQQ9Y646 472 aa22.02■■□□□ 1.12
TRAPPC9-215ENST00000524162 TLR5O60602 858 aa22.01■■□□□ 1.11
TRAPPC9-215ENST00000524162 ABL1P00519 1130 aa22.01■■□□□ 1.11
TRAPPC9-215ENST00000524162 PLA2G4AP47712 749 aa22.01■■□□□ 1.11
TRAPPC9-215ENST00000524162 IFNAR2P48551 515 aa22.01■■□□□ 1.11
TRAPPC9-215ENST00000524162 TNK2Q07912 1038 aa22.01■■□□□ 1.11
TRAPPC9-215ENST00000524162 PM20D1Q6GTS8 502 aa22.01■■□□□ 1.11
TRAPPC9-215ENST00000524162 C1orf210Q8IVY1 113 aa22.01■■□□□ 1.11
TRAPPC9-215ENST00000524162 ARHGEF19Q8IW93 802 aa22.01■■□□□ 1.11
TRAPPC9-215ENST00000524162 ZFRQ96KR1 1074 aaKnown RBP22.01■■□□□ 1.11
TRAPPC9-215ENST00000524162 TUBGCP2Q9BSJ2 902 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms