RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 PIP4P1Q86T03 277 aa24.21■■□□□ 1.47
PVT1-218ENST00000523328 DDX42Q86XP3 938 aaKnown RBP eCLIP24.21■■□□□ 1.47
PVT1-218ENST00000523328 WDR49Q8IV35 697 aa24.21■■□□□ 1.47
PVT1-218ENST00000523328 GLIS3Q8NEA6 775 aa24.21■■□□□ 1.47
PVT1-218ENST00000523328 SLC32A1Q9H598 525 aa24.21■■□□□ 1.47
PVT1-218ENST00000523328 PILRBQ9UKJ0 227 aa24.21■■□□□ 1.47
PVT1-218ENST00000523328 PCDH15Q96QU1 1955 aa24.21■■□□□ 1.47
PVT1-218ENST00000523328 TCRBV21S2A2A0A5A6 115 aa24.2■■□□□ 1.46
PVT1-218ENST00000523328 HYAL3O43820 417 aaPredicted RBP24.2■■□□□ 1.46
PVT1-218ENST00000523328 TACC1O75410 805 aa24.2■■□□□ 1.46
PVT1-218ENST00000523328 CST3P01034 146 aaPredicted RBP24.2■■□□□ 1.46
PVT1-218ENST00000523328 MBL2P11226 248 aaPredicted RBP24.2■■□□□ 1.46
PVT1-218ENST00000523328 SEMA3BQ13214 749 aa24.2■■□□□ 1.46
PVT1-218ENST00000523328 LY6G5CQ5SRR4 150 aa24.2■■□□□ 1.46
PVT1-218ENST00000523328 CCDC73Q6ZRK6 1079 aa24.2■■□□□ 1.46
PVT1-218ENST00000523328 TRAPPC11Q7Z392 1133 aa24.2■■□□□ 1.46
PVT1-218ENST00000523328 ZFRQ96KR1 1074 aaKnown RBP24.2■■□□□ 1.46
PVT1-218ENST00000523328 SLITRK1Q96PX8 696 aa24.2■■□□□ 1.46
PVT1-218ENST00000523328 ZNF518BQ9C0D4 1074 aa24.2■■□□□ 1.46
PVT1-218ENST00000523328 DPEP3Q9H4B8 488 aa24.2■■□□□ 1.46
PVT1-218ENST00000523328 HSPBP1Q9NZL4 362 aa24.2■■□□□ 1.46
PVT1-218ENST00000523328 TBC1D14Q9P2M4 693 aa24.2■■□□□ 1.46
PVT1-218ENST00000523328 NEUROG3Q9Y4Z2 214 aa24.2■■□□□ 1.46
PVT1-218ENST00000523328 VPS37CA5D8V6 355 aaPredicted RBP24.19■■□□□ 1.46
PVT1-218ENST00000523328 UPK3BL1B0FP48 263 aa24.19■■□□□ 1.46
PVT1-218ENST00000523328 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.19■■□□□ 1.46
PVT1-218ENST00000523328 UPK3BL2E5RIL1 263 aa24.19■■□□□ 1.46
PVT1-218ENST00000523328 PTPN1P18031 435 aaKnown RBP24.19■■□□□ 1.46
PVT1-218ENST00000523328 ITPKAP23677 461 aa24.19■■□□□ 1.46
PVT1-218ENST00000523328 HOXD13P35453 343 aa24.19■■□□□ 1.46
PVT1-218ENST00000523328 STAT6P42226 847 aa24.19■■□□□ 1.46
PVT1-218ENST00000523328 DPP6P42658 865 aa24.19■■□□□ 1.46
PVT1-218ENST00000523328 BYSLQ13895 437 aaKnown RBP24.19■■□□□ 1.46
PVT1-218ENST00000523328 COL9A2Q14055 689 aaPredicted RBP24.19■■□□□ 1.46
PVT1-218ENST00000523328 ETFBKMTQ8IXQ9 262 aa24.19■■□□□ 1.46
PVT1-218ENST00000523328 PANK2Q9BZ23 570 aa24.19■■□□□ 1.46
PVT1-218ENST00000523328 ELOVL4Q9GZR5 314 aa24.19■■□□□ 1.46
PVT1-218ENST00000523328 SNX25Q9H3E2 840 aa24.19■■□□□ 1.46
PVT1-218ENST00000523328 E2F8A0AVK6 867 aa24.18■■□□□ 1.46
PVT1-218ENST00000523328 FAM163BP0C2L3 166 aa24.18■■□□□ 1.46
PVT1-218ENST00000523328 HOXD12P35452 270 aa24.18■■□□□ 1.46
PVT1-218ENST00000523328 IFRD2Q12894 506 aaPredicted RBP24.18■■□□□ 1.46
PVT1-218ENST00000523328 FAM173BQ6P4H8 233 aa24.18■■□□□ 1.46
PVT1-218ENST00000523328 PGBD3Q8N328 593 aa24.18■■□□□ 1.46
PVT1-218ENST00000523328 OR6B3Q8NGW1 331 aa24.18■■□□□ 1.46
PVT1-218ENST00000523328 ZCCHC14Q8WYQ9 949 aaKnown RBP24.18■■□□□ 1.46
PVT1-218ENST00000523328 OTUB2Q96DC9 234 aa24.18■■□□□ 1.46
PVT1-218ENST00000523328 FSCN3Q9NQT6 498 aa24.18■■□□□ 1.46
PVT1-218ENST00000523328 KLK13Q9UKR3 277 aa24.18■■□□□ 1.46
PVT1-218ENST00000523328 SPAARA0A1B0GVQ0 90 aa24.17■■□□□ 1.46
PVT1-218ENST00000523328 COCHO43405 550 aa24.17■■□□□ 1.46
PVT1-218ENST00000523328 GAD2Q05329 585 aa24.17■■□□□ 1.46
PVT1-218ENST00000523328 CCDC65Q8IXS2 484 aa24.17■■□□□ 1.46
PVT1-218ENST00000523328 NUP93Q8N1F7 819 aa24.17■■□□□ 1.46
PVT1-218ENST00000523328 HPS3Q969F9 1004 aa24.17■■□□□ 1.46
PVT1-218ENST00000523328 B3GNT5Q9BYG0 378 aa24.17■■□□□ 1.46
PVT1-218ENST00000523328 KIAA1586Q9HCI6 787 aa24.17■■□□□ 1.46
PVT1-218ENST00000523328 HCN2Q9UL51 889 aa24.17■■□□□ 1.46
PVT1-218ENST00000523328 MSRB2Q9Y3D2 182 aa24.17■■□□□ 1.46
PVT1-218ENST00000523328 CLDN5O00501 218 aa24.16■■□□□ 1.46
PVT1-218ENST00000523328 AP5Z1O43299 807 aa24.16■■□□□ 1.46
PVT1-218ENST00000523328 CFIP05156 583 aa24.16■■□□□ 1.46
PVT1-218ENST00000523328 GABRG2P18507 467 aa24.16■■□□□ 1.46
PVT1-218ENST00000523328 YWHAQP27348 245 aa24.16■■□□□ 1.46
PVT1-218ENST00000523328 SIM1P81133 766 aaPredicted RBP24.16■■□□□ 1.46
PVT1-218ENST00000523328 CEBPZQ03701 1054 aaKnown RBP24.16■■□□□ 1.46
PVT1-218ENST00000523328 DUOXA1Q1HG43 343 aa24.16■■□□□ 1.46
PVT1-218ENST00000523328 WDR72Q3MJ13 1102 aa24.16■■□□□ 1.46
PVT1-218ENST00000523328 ZNF513Q8N8E2 541 aaPredicted RBP24.16■■□□□ 1.46
PVT1-218ENST00000523328 NAT16Q8N8M0 369 aa24.16■■□□□ 1.46
PVT1-218ENST00000523328 PDZD8Q8NEN9 1154 aa24.16■■□□□ 1.46
PVT1-218ENST00000523328 KCNV2Q8TDN2 545 aa24.16■■□□□ 1.46
PVT1-218ENST00000523328 OVCA2Q8WZ82 227 aa24.16■■□□□ 1.46
PVT1-218ENST00000523328 DUSP9Q99956 384 aaKnown RBP24.16■■□□□ 1.46
PVT1-218ENST00000523328 CAPN10Q9HC96 672 aa24.16■■□□□ 1.46
PVT1-218ENST00000523328 SLC6A14Q9UN76 642 aa24.16■■□□□ 1.46
PVT1-218ENST00000523328 DSPP15924 2871 aaKnown RBP24.15■■□□□ 1.46
PVT1-218ENST00000523328 TBC1D3BA6NDS4 549 aa24.15■■□□□ 1.46
PVT1-218ENST00000523328 HOXC11O43248 304 aaPredicted RBP24.15■■□□□ 1.46
PVT1-218ENST00000523328 TULP3O75386 442 aa24.15■■□□□ 1.46
PVT1-218ENST00000523328 DLATP10515 647 aaKnown RBP24.15■■□□□ 1.46
PVT1-218ENST00000523328 SNRNP35Q16560 246 aaKnown RBP24.15■■□□□ 1.46
PVT1-218ENST00000523328 STXBP4Q6ZWJ1 553 aa24.15■■□□□ 1.46
PVT1-218ENST00000523328 B3GALNT2Q8NCR0 500 aa24.15■■□□□ 1.46
PVT1-218ENST00000523328 CEP76Q8TAP6 659 aa24.15■■□□□ 1.46
PVT1-218ENST00000523328 FBXO32Q969P5 355 aa24.15■■□□□ 1.46
PVT1-218ENST00000523328 CGRRF1Q99675 332 aa24.15■■□□□ 1.46
PVT1-218ENST00000523328 MORC2Q9Y6X9 1032 aaPredicted RBP24.15■■□□□ 1.46
PVT1-218ENST00000523328 RTN3O95197 1032 aaPredicted RBP24.14■■□□□ 1.45
PVT1-218ENST00000523328 SERPINF2P08697 491 aa24.14■■□□□ 1.45
PVT1-218ENST00000523328 TNNI1P19237 187 aa24.14■■□□□ 1.45
PVT1-218ENST00000523328 TNNC1P63316 161 aa24.14■■□□□ 1.45
PVT1-218ENST00000523328 RPL6Q02878 288 aaKnown RBP24.14■■□□□ 1.45
PVT1-218ENST00000523328 SNX30Q5VWJ9 437 aa24.14■■□□□ 1.45
PVT1-218ENST00000523328 TRMT11Q7Z4G4 463 aaKnown RBP24.14■■□□□ 1.45
PVT1-218ENST00000523328 MIB1Q86YT6 1006 aa24.14■■□□□ 1.45
PVT1-218ENST00000523328 BBS7Q8IWZ6 715 aa24.14■■□□□ 1.45
PVT1-218ENST00000523328 DEFB119Q8N690 84 aa24.14■■□□□ 1.45
PVT1-218ENST00000523328 PDILTQ8N807 584 aa24.14■■□□□ 1.45
PVT1-218ENST00000523328 TERB1Q8NA31 727 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms