RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 NFATC1O95644 943 aa13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 OLFM2O95897 454 aa13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 EGFP01133 1207 aa13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 RPN1P04843 607 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 P4HA1P13674 534 aa13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 LPAL2Q16609 132 aa13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 SGSM1Q2NKQ1 1148 aa13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 PKN3Q6P5Z2 889 aa13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 C11orf57Q6ZUT1 292 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 DHX40Q8IX18 779 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 NUP93Q8N1F7 819 aa13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 TTC16Q8NEE8 873 aa13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 PDZD8Q8NEN9 1154 aa13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 CCDC26Q8TAB7 109 aa13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 TMC2Q8TDI7 906 aa13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 OVCA2Q8WZ82 227 aa13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 TAF4BQ92750 862 aa13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 CCDC47Q96A33 483 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 TNIP3Q96KP6 325 aa13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 ZNF518BQ9C0D4 1074 aa13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 SMYD3Q9H7B4 428 aa13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 FBRSL1Q9HCM7 1045 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 PARD6AQ9NPB6 346 aa13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 SLC8A2Q9UPR5 921 aa13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 TRAF3IP3Q9Y228 551 aa13.22□□□□□ -0.29
TRAPPC9-206ENST00000519482 LEFTY2O00292 366 aa13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 MAPK13O15264 365 aa13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 CALUO43852 315 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 ZNF500O60304 480 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 FOXD2O60548 495 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 VNN1O95497 513 aa13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 OAS1P00973 400 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 NR3C1P04150 777 aa13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 YWHAQP27348 245 aa13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 ERCC5P28715 1186 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 CACNA2D1P54289 1103 aa13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 CDH8P55286 799 aa13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 ZXDBP98169 803 aa13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 SPEM2Q0P670 501 aa13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 TAF10Q12962 218 aa13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 ZACNQ401N2 412 aa13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 CEP68Q76N32 757 aa13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 GAB3Q8WWW8 586 aa13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 RNF38Q9H0F5 515 aa13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 LINC00597Q9H2U6 94 aa13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 TMEM30AQ9NV96 361 aa13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 COMMD8Q9NX08 183 aa13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 FRMD4BQ9Y2L6 1034 aa13.21□□□□□ -0.29
TRAPPC9-206ENST00000519482 MYOFQ9NZM1 2061 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 CLDN5O00501 218 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 SLC9A3R1O14745 358 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 AKAP3O75969 853 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 RHOBTB3O94955 611 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 CLSTN1O94985 981 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 ABL1P00519 1130 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 DLG4P78352 724 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 SRSF5Q13243 272 aaKnown RBP13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 PNOCQ13519 176 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 MORC3Q14149 939 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 CSRP2Q16527 193 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 NFIL3Q16649 462 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 PAQR9Q6ZVX9 377 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 SYT13Q7L8C5 426 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 FAM35AQ86V20 835 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 UNC93AQ86WB7 457 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 DDX42Q86XP3 938 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 ACDQ96AP0 544 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 SMARCD1Q96GM5 515 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 LOXL4Q96JB6 756 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 MED10Q9BTT4 135 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 DMAP1Q9NPF5 467 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 SEMA4GQ9NTN9 838 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 IL37Q9NZH6 218 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 CDV3Q9UKY7 258 aaKnown RBP13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 CPQQ9Y646 472 aa13.2□□□□□ -0.3
TRAPPC9-206ENST00000519482 FAM92AA1XBS5 289 aa13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 TNFRSF10BO14763 440 aa13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 AP5Z1O43299 807 aa13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 RPP40O75818 363 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 ASS1P00966 412 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 TRIM21P19474 475 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 HOXC13P31276 330 aa13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 RAP1GAPP47736 663 aa13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 ENPEPQ07075 957 aa13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 DPYDQ12882 1025 aa13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 IFRD2Q12894 506 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 DPCR1Q3MIW9 517 aa13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 SNX30Q5VWJ9 437 aa13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 CEP135Q66GS9 1140 aa13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 NAIF1Q69YI7 327 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 SCARA5Q6ZMJ2 495 aa13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 SV2AQ7L0J3 742 aa13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 CACNA2D4Q7Z3S7 1137 aa13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 FILIP1Q7Z7B0 1213 aa13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 DRC7Q8IY82 874 aa13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 ADGRG2Q8IZP9 1017 aa13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 CRYBG2Q8N1P7 616 aa13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 FAM160A2Q8N612 972 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 RPLP0P6Q8NHW5 317 aa13.19□□□□□ -0.3
TRAPPC9-206ENST00000519482 ENOX1Q8TC92 643 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms