RNA–Protein interactions for RNA: ENST00000519363.1

PABPC1-210, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-210ENST00000519363 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.67■□□□□ 0.1
PABPC1-210ENST00000519363 RWDD3Q9Y3V2 267 aa15.67■□□□□ 0.1
PABPC1-210ENST00000519363 NR2E3Q9Y5X4 410 aa15.67■□□□□ 0.1
PABPC1-210ENST00000519363 CDY1Q9Y6F8 540 aa15.67■□□□□ 0.1
PABPC1-210ENST00000519363 USP3Q9Y6I4 520 aa15.67■□□□□ 0.1
PABPC1-210ENST00000519363 TNFRSF10BO14763 440 aa15.66■□□□□ 0.1
PABPC1-210ENST00000519363 ZNF185O15231 689 aa15.66■□□□□ 0.1
PABPC1-210ENST00000519363 TLL1O43897 1013 aa15.66■□□□□ 0.1
PABPC1-210ENST00000519363 LRCH4O75427 683 aa15.66■□□□□ 0.1
PABPC1-210ENST00000519363 ZBED1O96006 694 aa15.66■□□□□ 0.1
PABPC1-210ENST00000519363 PDGFRAP16234 1089 aa15.66■□□□□ 0.1
PABPC1-210ENST00000519363 CYP2F1P24903 491 aa15.66■□□□□ 0.1
PABPC1-210ENST00000519363 SDC4P31431 198 aa15.66■□□□□ 0.1
PABPC1-210ENST00000519363 CXCR5P32302 372 aa15.66■□□□□ 0.1
PABPC1-210ENST00000519363 GTF2F1P35269 517 aaKnown RBP eCLIP15.66■□□□□ 0.1
PABPC1-210ENST00000519363 DNA2P51530 1060 aa15.66■□□□□ 0.1
PABPC1-210ENST00000519363 RWDD2BP57060 319 aa15.66■□□□□ 0.1
PABPC1-210ENST00000519363 ROR1Q01973 937 aa15.66■□□□□ 0.1
PABPC1-210ENST00000519363 TPGS2Q68CL5 300 aa15.66■□□□□ 0.1
PABPC1-210ENST00000519363 CC2D1AQ6P1N0 951 aaPredicted RBP15.66■□□□□ 0.1
PABPC1-210ENST00000519363 BEND5Q7L4P6 421 aa15.66■□□□□ 0.1
PABPC1-210ENST00000519363 KATNAL2Q8IYT4 538 aa15.66■□□□□ 0.1
PABPC1-210ENST00000519363 CAPZA3Q96KX2 299 aa15.66■□□□□ 0.1
PABPC1-210ENST00000519363 SLC2A13Q96QE2 648 aa15.66■□□□□ 0.1
PABPC1-210ENST00000519363 C11orf84Q9BUA3 381 aaPredicted RBP15.66■□□□□ 0.1
PABPC1-210ENST00000519363 DDX23Q9BUQ8 820 aaKnown RBP15.66■□□□□ 0.1
PABPC1-210ENST00000519363 TRIM62Q9BVG3 475 aa15.66■□□□□ 0.1
PABPC1-210ENST00000519363 PLVAPQ9BX97 442 aa15.66■□□□□ 0.1
PABPC1-210ENST00000519363 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.66■□□□□ 0.14e-14■■□□□ 11.8
PABPC1-210ENST00000519363 PGRMC1O00264 195 aaKnown RBP15.65■□□□□ 0.1
PABPC1-210ENST00000519363 TADA3O75528 432 aa15.65■□□□□ 0.1
PABPC1-210ENST00000519363 FGF18O76093 207 aa15.65■□□□□ 0.1
PABPC1-210ENST00000519363 VNN2O95498 520 aa15.65■□□□□ 0.1
PABPC1-210ENST00000519363 GRIK1P39086 918 aa15.65■□□□□ 0.1
PABPC1-210ENST00000519363 MATKP42679 507 aa15.65■□□□□ 0.1
PABPC1-210ENST00000519363 PAFAH1B1P43034 410 aa15.65■□□□□ 0.1
PABPC1-210ENST00000519363 SLC5A3P53794 718 aa15.65■□□□□ 0.1
PABPC1-210ENST00000519363 TAS2R40P59535 323 aa15.65■□□□□ 0.1
PABPC1-210ENST00000519363 YWHAZP63104 245 aaKnown RBP15.65■□□□□ 0.1
PABPC1-210ENST00000519363 SLC25A11Q02978 314 aaKnown RBP15.65■□□□□ 0.1
PABPC1-210ENST00000519363 KRT17Q04695 432 aa15.65■□□□□ 0.1
PABPC1-210ENST00000519363 TAF5Q15542 800 aa15.65■□□□□ 0.1
PABPC1-210ENST00000519363 CCDC181Q5TID7 509 aa15.65■□□□□ 0.1
PABPC1-210ENST00000519363 BHLHA9Q7RTU4 235 aa15.65■□□□□ 0.1
PABPC1-210ENST00000519363 SPATA17Q96L03 361 aa15.65■□□□□ 0.1
PABPC1-210ENST00000519363 RNPC3Q96LT9 517 aaKnown RBP15.65■□□□□ 0.1
PABPC1-210ENST00000519363 ZBP1Q9H171 429 aa15.65■□□□□ 0.1
PABPC1-210ENST00000519363 POPDC2Q9HBU9 364 aa15.65■□□□□ 0.1
PABPC1-210ENST00000519363 COMMD8Q9NX08 183 aa15.65■□□□□ 0.1
PABPC1-210ENST00000519363 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.65■□□□□ 0.1
PABPC1-210ENST00000519363 FNIP2Q9P278 1114 aa15.65■□□□□ 0.1
PABPC1-210ENST00000519363 AFF4Q9UHB7 1163 aaKnown RBP15.65■□□□□ 0.1
PABPC1-210ENST00000519363 LZTS1Q9Y250 596 aa15.65■□□□□ 0.1
PABPC1-210ENST00000519363 USTQ9Y2C2 406 aa15.65■□□□□ 0.1
PABPC1-210ENST00000519363 SSX2IPQ9Y2D8 614 aa15.65■□□□□ 0.1
PABPC1-210ENST00000519363 WDR27A2RRH5 827 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 CTAGE15A4D2H0 777 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 PDE2AO00408 941 aaPredicted RBP15.64■□□□□ 0.09
PABPC1-210ENST00000519363 CEP104O60308 925 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 GRAP2O75791 330 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 RNF8O76064 485 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 KRT7P08729 469 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 CTAGE8P0CG41 777 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 HAPLN1P10915 354 aaPredicted RBP15.64■□□□□ 0.09
PABPC1-210ENST00000519363 NOS2P35228 1153 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 NDUFV1P49821 464 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 RNASE9P60153 205 aaKnown RBP15.64■□□□□ 0.09
PABPC1-210ENST00000519363 TUBB4BP68371 445 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 HADHQ16836 314 aaKnown RBP15.64■□□□□ 0.09
PABPC1-210ENST00000519363 CCDC14Q49A88 953 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 COL13A1Q5TAT6 717 aaPredicted RBP15.64■□□□□ 0.09
PABPC1-210ENST00000519363 SEL1L2Q5TEA6 688 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 RNF19BQ6ZMZ0 732 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 STRADAQ7RTN6 431 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 CTAGE6Q86UF2 777 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 CTAGE4Q8IX94 777 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 VPS52Q8N1B4 723 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 ARFGAP1Q8N6T3 406 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 ATAD1Q8NBU5 361 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 EXD1Q8NHP7 514 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 CENPIQ92674 756 aaPredicted RBP15.64■□□□□ 0.09
PABPC1-210ENST00000519363 NT5C3BQ969T7 300 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 FAM149B1Q96BN6 582 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 PGLYRP2Q96PD5 576 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 NAP1L3Q99457 506 aaPredicted RBP15.64■□□□□ 0.09
PABPC1-210ENST00000519363 CLSTN3Q9BQT9 956 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 RXFP1Q9HBX9 757 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 DDX56Q9NY93 547 aaKnown RBP15.64■□□□□ 0.09
PABPC1-210ENST00000519363 RRN3Q9NYV6 651 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 IL37Q9NZH6 218 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 MAFFQ9ULX9 164 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 STAP1Q9ULZ2 295 aa15.64■□□□□ 0.09
PABPC1-210ENST00000519363 FAM92AA1XBS5 289 aa15.63■□□□□ 0.09
PABPC1-210ENST00000519363 LCHNA4D1U4 455 aa15.63■□□□□ 0.09
PABPC1-210ENST00000519363 YJEFN3A6XGL0 299 aa15.63■□□□□ 0.09
PABPC1-210ENST00000519363 EFCAB8A8MWE9 144 aa15.63■□□□□ 0.09
PABPC1-210ENST00000519363 E7ENQ6 273 aa15.63■□□□□ 0.09
PABPC1-210ENST00000519363 ADAM12O43184 909 aa15.63■□□□□ 0.09
PABPC1-210ENST00000519363 CTIFO43310 598 aaKnown RBP15.63■□□□□ 0.09
PABPC1-210ENST00000519363 LILRB3O75022 631 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms