RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 ACVR2AP27037 513 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 BCAR1P56945 870 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 ERVK-21P61565 698 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 HSF1Q00613 529 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 MEF2BQ02080 365 aaPredicted RBP-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 COX10Q12887 443 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 TRAF2Q12933 501 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 BOP1Q14137 746 aaKnown RBP-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 HLXQ14774 488 aaPredicted RBP-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 AWAT1Q58HT5 328 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 PRAMEF9Q5VWM5 478 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 ALG1LQ6GMV1 187 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 RTN4RL1Q86UN2 441 aaPredicted RBP-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 SLC44A5Q8NCS7 719 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 TAAR8Q969N4 342 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 E2F7Q96AV8 911 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 MRGPRX3Q96LB0 322 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 CCDC17Q96LX7 622 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 ACTRT3Q9BYD9 372 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 WNT8AQ9H1J5 351 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 OCIAD1Q9NX40 245 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 MALT1Q9UDY8 824 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 ZDHHC2Q9UIJ5 367 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 KLK13Q9UKR3 277 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 FZD10Q9ULW2 581 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 NEU2Q9Y3R4 380 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 KIF25-AS1Q9Y6Z4 181 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 COL11A1P12107 1806 aaPredicted RBP-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 PMS2P5A8MQ11 134 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 NR5A2O00482 541 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 KIAA0391O15091 583 aaKnown RBP-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 MAFGO15525 162 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 PLAUP00749 431 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 TPOP07202 933 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 TUBBP07437 444 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 PRSS1P07477 247 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 FCER1AP12319 257 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 ZNF17P17021 662 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 GARTP22102 1010 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 ITGB8P26012 769 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 NPTX2P47972 431 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 ANXA11P50995 505 aaKnown RBP-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 PDE1AP54750 535 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 GFRA1P56159 465 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 TUBB4BP68371 445 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 MC2RQ01718 297 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 SNTA1Q13424 505 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 TMEM132BQ14DG7 1078 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 TM4SF20Q53R12 229 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 PITRM1Q5JRX3 1037 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 PRAMEF14Q5SWL7 426 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 SEL1L3Q68CR1 1132 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 RETSATQ6NUM9 610 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 Q6ZTK2 550 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 FJX1Q86VR8 437 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 OSTM1Q86WC4 334 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 CLIP4Q8N3C7 705 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 FSTL5Q8N475 847 aaPredicted RBP-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 CDYL2Q8N8U2 506 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 C7orf57Q8NEG2 295 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 ZNF473Q8WTR7 871 aaKnown RBP-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 RBMXL1Q96E39 390 aaKnown RBP-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 HIST1H2AHQ96KK5 128 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 CCDC140Q96MF4 163 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 APBA2Q99767 749 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 HIST1H2AJQ99878 128 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 NOL10Q9BSC4 688 aaKnown RBP-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 ELOVL1Q9BW60 279 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 RAB11FIP5Q9BXF6 653 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 RBCK1Q9BYM8 510 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 ASB8Q9H765 288 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 EVA1AQ9H8M9 152 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 COPRSQ9NQ92 184 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 KCNH7Q9NS40 1196 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 RNF19AQ9NV58 838 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 CCNL1Q9UK58 526 aaPredicted RBP-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 HDAC9Q9UKV0 1011 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 NUMBLQ9Y6R0 609 aa-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 SYNE1Q8NF91 8797 aaKnown RBP-0.72□□□□□ -2.52
SNORA40.16-201ENST00000517238 COL1A2P08123 1366 aa-0.72□□□□□ -2.53
SNORA40.16-201ENST00000517238 CDX4O14627 284 aaPredicted RBP-0.73□□□□□ -2.53
SNORA40.16-201ENST00000517238 MAGEB4O15481 346 aaPredicted RBP-0.73□□□□□ -2.53
SNORA40.16-201ENST00000517238 RGS14O43566 566 aa-0.73□□□□□ -2.53
SNORA40.16-201ENST00000517238 ATG13O75143 517 aa-0.73□□□□□ -2.53
SNORA40.16-201ENST00000517238 SLITRK3O94933 977 aa-0.73□□□□□ -2.53
SNORA40.16-201ENST00000517238 CD63P08962 238 aa-0.73□□□□□ -2.53
SNORA40.16-201ENST00000517238 CLCN2P51788 898 aa-0.73□□□□□ -2.53
SNORA40.16-201ENST00000517238 CLCN3P51790 818 aa-0.73□□□□□ -2.53
SNORA40.16-201ENST00000517238 ABATP80404 500 aa-0.73□□□□□ -2.53
SNORA40.16-201ENST00000517238 SLFN5Q08AF3 891 aa-0.73□□□□□ -2.53
SNORA40.16-201ENST00000517238 GPS2Q13227 327 aa-0.73□□□□□ -2.53
SNORA40.16-201ENST00000517238 TUBB3Q13509 450 aa-0.73□□□□□ -2.53
SNORA40.16-201ENST00000517238 SF3A2Q15428 464 aaKnown RBP-0.73□□□□□ -2.53
SNORA40.16-201ENST00000517238 PLK5Q496M5 336 aa-0.73□□□□□ -2.53
SNORA40.16-201ENST00000517238 KRTAP13-2Q52LG2 175 aa-0.73□□□□□ -2.53
SNORA40.16-201ENST00000517238 FAM47AQ5JRC9 791 aa-0.73□□□□□ -2.53
SNORA40.16-201ENST00000517238 CATSPEREQ5SY80 951 aa-0.73□□□□□ -2.53
SNORA40.16-201ENST00000517238 KPRPQ5T749 579 aaPredicted RBP-0.73□□□□□ -2.53
SNORA40.16-201ENST00000517238 L1TD1Q5T7N2 865 aaKnown RBP-0.73□□□□□ -2.53
SNORA40.16-201ENST00000517238 RUFY4Q6ZNE9 571 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms