RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 KPNA6O60684 536 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 NBNO60934 754 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 SNRPAP09012 282 aaKnown RBP11.38□□□□□ -0.59
TRIM41-209ENST00000515834 CLK1P49759 484 aaKnown RBP11.38□□□□□ -0.59
TRIM41-209ENST00000515834 CAPRIN2Q6IMN6 1127 aaKnown RBP11.38□□□□□ -0.59
TRIM41-209ENST00000515834 EFL1Q7Z2Z2 1120 aaKnown RBP11.38□□□□□ -0.59
TRIM41-209ENST00000515834 STAMBPL1Q96FJ0 436 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 YIPF3Q9GZM5 350 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 EVA1BQ9NVM1 165 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 A0A087X0T9 212 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 KPNA3O00505 521 aaPredicted RBP11.38□□□□□ -0.59
TRIM41-209ENST00000515834 MTF1Q14872 753 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 SLC18A3Q16572 532 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 POM121L1PQ3SYA9 428 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 SGMS1Q86VZ5 419 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 ZNF34Q8IZ26 560 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 CATSPER1Q8NEC5 780 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 CNDP1Q96KN2 507 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 CRTAMO95727 393 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 CCR4P51679 360 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 SPATA21Q7Z572 469 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 PTAR1Q7Z6K3 402 aaPredicted RBP11.38□□□□□ -0.59
TRIM41-209ENST00000515834 LONP2Q86WA8 852 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 CLIP3Q96DZ5 547 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 KANSL3Q9P2N6 904 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 LOC100653049A0A140TA62 436 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 TBC1D12O60347 775 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 KRT34O76011 436 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 KCNJ1P48048 391 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 GRIK4Q16099 956 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 XRRA1Q6P2D8 792 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 PRPF39Q86UA1 669 aaKnown RBP11.38□□□□□ -0.59
TRIM41-209ENST00000515834 ZNF333Q96JL9 665 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 LRRC1Q9BTT6 524 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 BCL2L14Q9BZR8 327 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 UNKQ9C0B0 810 aaKnown RBP11.38□□□□□ -0.59
TRIM41-209ENST00000515834 PIF1Q9H611 641 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 PCDHB5Q9Y5E4 795 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 LRRC14BA6NHZ5 514 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 CHURC1-FNTBB4DL54 471 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 OGTO15294 1046 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 MSH4O15457 936 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 ITIH2P19823 946 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 KLRK1P26718 216 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 ITGA8P53708 1063 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 AASDHQ4L235 1098 aaPredicted RBP11.38□□□□□ -0.59
TRIM41-209ENST00000515834 OVOS1Q6IE37 1185 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 CHP1Q99653 195 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 RANBP17Q9H2T7 1088 aaKnown RBP11.38□□□□□ -0.59
TRIM41-209ENST00000515834 RMND5AQ9H871 391 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 CAAP1Q9H8G2 361 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 PALMDQ9NP74 551 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 MPP6Q9NZW5 540 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 GRID1Q9ULK0 1009 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 TMCC3Q9ULS5 477 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 RPS6KL1Q9Y6S9 549 aa11.38□□□□□ -0.59
TRIM41-209ENST00000515834 GOLGA8TH3BQL2 631 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 AMD1P17707 334 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 MAGEA4P43358 317 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 ACTN3Q08043 901 aaPredicted RBP11.37□□□□□ -0.59
TRIM41-209ENST00000515834 BOP1Q14137 746 aaKnown RBP11.37□□□□□ -0.59
TRIM41-209ENST00000515834 FZD1Q9UP38 647 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 MTA2O94776 668 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 ACAT1P24752 427 aaKnown RBP11.37□□□□□ -0.59
TRIM41-209ENST00000515834 CTCFP49711 727 aaPredicted RBP11.37□□□□□ -0.59
TRIM41-209ENST00000515834 TKTL1P51854 596 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 THOP1P52888 689 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 GUCY1A3Q02108 690 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 MFSD10Q14728 455 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 DENND1BQ6P3S1 775 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 AGPAT5Q9NUQ2 364 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 ADGRG1Q9Y653 693 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 PDS5AQ29RF7 1337 aaKnown RBP11.37□□□□□ -0.59
TRIM41-209ENST00000515834 PNMA6AP0CW24 399 aaPredicted RBP11.37□□□□□ -0.59
TRIM41-209ENST00000515834 CYP2C8P10632 490 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 FDFT1P37268 417 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 CASP4P49662 377 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 TGFB2P61812 414 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 VSNL1P62760 191 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 FAM131BQ86XD5 332 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 FAM172AQ8WUF8 416 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 NACC2Q96BF6 587 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 ACOX2Q99424 681 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 MTA3Q9BTC8 594 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 RUSC1Q9BVN2 902 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 TPST1O60507 370 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 CHN1P15882 459 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 NOS3P29474 1203 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 SERPINB3P29508 390 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 CTNNB1P35222 781 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 XRCC4Q13426 336 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 ENGASEQ8NFI3 743 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 GRAMD1AQ96CP6 724 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 CCT7Q99832 543 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 SMG5Q9UPR3 1016 aaKnown RBP11.37□□□□□ -0.59
TRIM41-209ENST00000515834 A0A1W2PQC6 194 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 CCNT2O60583 730 aaKnown RBP11.37□□□□□ -0.59
TRIM41-209ENST00000515834 KATNA1O75449 491 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 BCAT1P54687 386 aa11.37□□□□□ -0.59
TRIM41-209ENST00000515834 CBWD3Q5JTY5 395 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms