RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 CAPN11Q9UMQ6 739 aa21.3■■□□□ 1
USP53-208ENST00000514305 VPS13AQ96RL7 3174 aa21.3■■□□□ 1
USP53-208ENST00000514305 KANSL1LA0AUZ9 987 aa21.29■■□□□ 1
USP53-208ENST00000514305 CYP26A1O43174 497 aa21.29■■□□□ 1
USP53-208ENST00000514305 THAP12O43422 761 aa21.29■■□□□ 1
USP53-208ENST00000514305 HAPLN1P10915 354 aaPredicted RBP21.29■■□□□ 1
USP53-208ENST00000514305 JAM2P57087 298 aa21.29■■□□□ 1
USP53-208ENST00000514305 ORC1Q13415 861 aa21.29■■□□□ 1
USP53-208ENST00000514305 SFMBT2Q5VUG0 894 aa21.29■■□□□ 1
USP53-208ENST00000514305 C12orf29Q8N999 325 aa21.29■■□□□ 1
USP53-208ENST00000514305 SLC2A14Q8TDB8 520 aa21.29■■□□□ 1
USP53-208ENST00000514305 B3GNT5Q9BYG0 378 aa21.29■■□□□ 1
USP53-208ENST00000514305 FAM49BQ9NUQ9 324 aa21.29■■□□□ 1
USP53-208ENST00000514305 ZNHIT6Q9NWK9 470 aaKnown RBP21.29■■□□□ 1
USP53-208ENST00000514305 NME7Q9Y5B8 376 aa21.29■■□□□ 1
USP53-208ENST00000514305 TSC2P49815 1807 aa21.29■■□□□ 1
USP53-208ENST00000514305 DMDP11532 3685 aa21.28■■□□□ 1
USP53-208ENST00000514305 HCRTO43612 131 aa21.28■■□□□ 1
USP53-208ENST00000514305 AP1G2O75843 785 aa21.28■■□□□ 1
USP53-208ENST00000514305 MICAL2O94851 1124 aa21.28■■□□□ 1
USP53-208ENST00000514305 BDNFP23560 247 aa21.28■■□□□ 1
USP53-208ENST00000514305 BCAT1P54687 386 aa21.28■■□□□ 1
USP53-208ENST00000514305 SNX16P57768 344 aa21.28■■□□□ 1
USP53-208ENST00000514305 TWF1Q12792 350 aa21.28■■□□□ 1
USP53-208ENST00000514305 UBXN2BQ14CS0 331 aa21.28■■□□□ 1
USP53-208ENST00000514305 PRSS36Q5K4E3 855 aa21.28■■□□□ 1
USP53-208ENST00000514305 PPP1R26Q5T8A7 1209 aaPredicted RBP21.28■■□□□ 1
USP53-208ENST00000514305 ZC3H14Q6PJT7 736 aaKnown RBP21.28■■□□□ 1
USP53-208ENST00000514305 LCLAT1Q6UWP7 414 aa21.28■■□□□ 1
USP53-208ENST00000514305 TMC6Q7Z403 805 aa21.28■■□□□ 1
USP53-208ENST00000514305 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.28■■□□□ 1
USP53-208ENST00000514305 FAM35AQ86V20 835 aa21.28■■□□□ 1
USP53-208ENST00000514305 CNGA4Q8IV77 575 aa21.28■■□□□ 1
USP53-208ENST00000514305 C1orf210Q8IVY1 113 aa21.28■■□□□ 1
USP53-208ENST00000514305 SCN4BQ8IWT1 228 aa21.28■■□□□ 1
USP53-208ENST00000514305 ANKRD52Q8NB46 1076 aa21.28■■□□□ 1
USP53-208ENST00000514305 LEMD2Q8NC56 503 aa21.28■■□□□ 1
USP53-208ENST00000514305 ZNF606Q8WXB4 792 aa21.28■■□□□ 1
USP53-208ENST00000514305 SYN2Q92777 582 aaPredicted RBP21.28■■□□□ 1
USP53-208ENST00000514305 ELSPBP1Q96BH3 223 aa21.28■■□□□ 1
USP53-208ENST00000514305 DMAP1Q9NPF5 467 aaPredicted RBP21.28■■□□□ 1
USP53-208ENST00000514305 ASAH2Q9NR71 780 aa21.28■■□□□ 1
USP53-208ENST00000514305 TMLHEQ9NVH6 421 aa21.28■■□□□ 1
USP53-208ENST00000514305 DLGAP2Q9P1A6 1054 aa21.28■■□□□ 1
USP53-208ENST00000514305 BZW2Q9Y6E2 419 aaKnown RBP21.28■■□□□ 1
USP53-208ENST00000514305 CFAP54Q96N23 3096 aa21.28■■□□□ 1
USP53-208ENST00000514305 RNF225M0QZC1 329 aaPredicted RBP21.27■■□□□ 1
USP53-208ENST00000514305 EPHB6O15197 1021 aa21.27■■□□□ 1
USP53-208ENST00000514305 GFPT2O94808 682 aa21.27■■□□□ 1
USP53-208ENST00000514305 ADCY5O95622 1261 aa21.27■■□□□ 1
USP53-208ENST00000514305 SETSIPP0DME0 302 aa21.27■■□□□ 1
USP53-208ENST00000514305 CSH1P0DML2 217 aa21.27■■□□□ 1
USP53-208ENST00000514305 CSH2P0DML3 217 aa21.27■■□□□ 1
USP53-208ENST00000514305 CCDC130P13994 396 aa21.27■■□□□ 1
USP53-208ENST00000514305 CYP2F1P24903 491 aa21.27■■□□□ 1
USP53-208ENST00000514305 ADORA2BP29275 332 aa21.27■■□□□ 1
USP53-208ENST00000514305 CDC25BP30305 580 aa21.27■■□□□ 1
USP53-208ENST00000514305 ASIC2Q16515 512 aa21.27■■□□□ 1
USP53-208ENST00000514305 FUKQ8N0W3 1084 aa21.27■■□□□ 1
USP53-208ENST00000514305 CPLX3Q8WVH0 158 aa21.27■■□□□ 1
USP53-208ENST00000514305 TCEAL4Q96EI5 215 aa21.27■■□□□ 1
USP53-208ENST00000514305 C8orf48Q96LL4 319 aa21.27■■□□□ 1
USP53-208ENST00000514305 DDX23Q9BUQ8 820 aaKnown RBP21.27■■□□□ 1
USP53-208ENST00000514305 DUSP16Q9BY84 665 aa21.27■■□□□ 1
USP53-208ENST00000514305 UBXN6Q9BZV1 441 aa21.27■■□□□ 1
USP53-208ENST00000514305 TTYH3Q9C0H2 523 aa21.27■■□□□ 1
USP53-208ENST00000514305 SEMA4AQ9H3S1 761 aa21.27■■□□□ 1
USP53-208ENST00000514305 ZFP14Q9HCL3 533 aa21.27■■□□□ 1
USP53-208ENST00000514305 PNPLA8Q9NP80 782 aa21.27■■□□□ 1
USP53-208ENST00000514305 TSPAN16Q9UKR8 245 aa21.27■■□□□ 1
USP53-208ENST00000514305 SLC27A5Q9Y2P5 690 aa21.27■■□□□ 1
USP53-208ENST00000514305 YIPF1Q9Y548 306 aa21.27■■□□□ 1
USP53-208ENST00000514305 PATJQ8NI35 1801 aa21.27■□□□□ 0.99
USP53-208ENST00000514305 CLCN1P35523 988 aa21.26■□□□□ 0.99
USP53-208ENST00000514305 BST2Q10589 180 aaKnown RBP21.26■□□□□ 0.99
USP53-208ENST00000514305 TANGO2Q6ICL3 276 aa21.26■□□□□ 0.99
USP53-208ENST00000514305 TPRG1Q6ZUI0 275 aa21.26■□□□□ 0.99
USP53-208ENST00000514305 VPS36Q86VN1 386 aa21.26■□□□□ 0.99
USP53-208ENST00000514305 SPATA17Q96L03 361 aa21.26■□□□□ 0.99
USP53-208ENST00000514305 NOX5Q96PH1 765 aa21.26■□□□□ 0.99
USP53-208ENST00000514305 OSBPL6Q9BZF3 934 aa21.26■□□□□ 0.99
USP53-208ENST00000514305 GPR88Q9GZN0 384 aa21.26■□□□□ 0.99
USP53-208ENST00000514305 KRT82Q9NSB4 513 aa21.26■□□□□ 0.99
USP53-208ENST00000514305 COMMD8Q9NX08 183 aa21.26■□□□□ 0.99
USP53-208ENST00000514305 AIPL1Q9NZN9 384 aa21.26■□□□□ 0.99
USP53-208ENST00000514305 AJAP1Q9UKB5 411 aaPredicted RBP21.26■□□□□ 0.99
USP53-208ENST00000514305 COL4A3Q01955 1670 aa21.25■□□□□ 0.99
USP53-208ENST00000514305 LRRC53A6NM62 1247 aa21.25■□□□□ 0.99
USP53-208ENST00000514305 O00370 1275 aa21.25■□□□□ 0.99
USP53-208ENST00000514305 FGF19O95750 216 aa21.25■□□□□ 0.99
USP53-208ENST00000514305 MYL4P12829 197 aa21.25■□□□□ 0.99
USP53-208ENST00000514305 CYP11B1P15538 503 aa21.25■□□□□ 0.99
USP53-208ENST00000514305 BRD2P25440 801 aaKnown RBP21.25■□□□□ 0.99
USP53-208ENST00000514305 CASP14P31944 242 aa21.25■□□□□ 0.99
USP53-208ENST00000514305 MAGEA9P43362 315 aa21.25■□□□□ 0.99
USP53-208ENST00000514305 GOLGA7BQ2TAP0 167 aa21.25■□□□□ 0.99
USP53-208ENST00000514305 PPP1R2P3Q6NXS1 205 aa21.25■□□□□ 0.99
USP53-208ENST00000514305 FANCMQ8IYD8 2048 aa21.25■□□□□ 0.99
USP53-208ENST00000514305 MSANTD4Q8NCY6 345 aa21.25■□□□□ 0.99
USP53-208ENST00000514305 OR8K1Q8NGG5 319 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms