RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 LRRC15Q8TF66 581 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 SNX19Q92543 992 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 DYDC2Q96IM9 177 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 MYRFLQ96LU7 910 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 ZCWPW1Q9H0M4 648 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 CDT1Q9H211 546 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 SLKQ9H2G2 1235 aaPredicted RBP10.11□□□□□ -0.79
CLCN3-208ENST00000512813 ANKEF1Q9NU02 776 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 GEMIN8Q9NWZ8 242 aaKnown RBP10.11□□□□□ -0.79
CLCN3-208ENST00000512813 TUBGCP4Q9UGJ1 667 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 ATXN7L1Q9ULK2 861 aaPredicted RBP10.11□□□□□ -0.79
CLCN3-208ENST00000512813 RAD54BQ9Y620 910 aa10.11□□□□□ -0.79
CLCN3-208ENST00000512813 ARID1BQ8NFD5 2236 aaPredicted RBP10.1□□□□□ -0.79
CLCN3-208ENST00000512813 RP1L1Q8IWN7 2480 aaPredicted RBP10.1□□□□□ -0.79
CLCN3-208ENST00000512813 YKT6O15498 198 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 TULP3O75386 442 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 NOL4O94818 638 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 LYPLA2O95372 231 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 LIG1P18858 919 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 ABCB4P21439 1286 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 LRPAP1P30533 357 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 PDE6CP51160 858 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 CDR1P51861 262 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 OSTNP61366 133 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 SHBQ15464 509 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 C20orf194Q5TEA3 1177 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 NT5DC1Q5TFE4 455 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 CDCP2Q5VXM1 449 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 DSTYKQ6XUX3 929 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 SYNE3Q6ZMZ3 975 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 USP53Q70EK8 1073 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 SRRM1Q8IYB3 904 aaKnown RBP10.1□□□□□ -0.79
CLCN3-208ENST00000512813 CCDC43Q96MW1 224 aaKnown RBP10.1□□□□□ -0.79
CLCN3-208ENST00000512813 NACC1Q96RE7 527 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 ELF4Q99607 663 aaPredicted RBP10.1□□□□□ -0.79
CLCN3-208ENST00000512813 NUP58Q9BVL2 599 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 TTC12Q9H892 705 aaPredicted RBP10.1□□□□□ -0.79
CLCN3-208ENST00000512813 KCNMB3Q9NPA1 279 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 DEC1Q9P2X7 70 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 TNFSF13BQ9Y275 285 aa10.1□□□□□ -0.79
CLCN3-208ENST00000512813 GFRA2O00451 464 aa10.09□□□□□ -0.79
CLCN3-208ENST00000512813 SLC37A4O43826 429 aa10.09□□□□□ -0.79
CLCN3-208ENST00000512813 USO1O60763 962 aaKnown RBP10.09□□□□□ -0.79
CLCN3-208ENST00000512813 AGFG2O95081 481 aa10.09□□□□□ -0.79
CLCN3-208ENST00000512813 ODC1P11926 461 aa10.09□□□□□ -0.79
CLCN3-208ENST00000512813 HDCP19113 662 aa10.09□□□□□ -0.79
CLCN3-208ENST00000512813 RARRES1P49788 294 aa10.09□□□□□ -0.79
CLCN3-208ENST00000512813 OXCT1P55809 520 aa10.09□□□□□ -0.79
CLCN3-208ENST00000512813 GAD2Q05329 585 aa10.09□□□□□ -0.79
CLCN3-208ENST00000512813 ZC3H18Q86VM9 953 aaKnown RBP10.09□□□□□ -0.79
CLCN3-208ENST00000512813 PTRH1Q86Y79 214 aaKnown RBP10.09□□□□□ -0.79
CLCN3-208ENST00000512813 SSC4DQ8WTU2 575 aa10.09□□□□□ -0.79
CLCN3-208ENST00000512813 BSNDQ8WZ55 320 aa10.09□□□□□ -0.79
CLCN3-208ENST00000512813 DEPDC7Q96QD5 511 aa10.09□□□□□ -0.79
CLCN3-208ENST00000512813 C22orf23Q9BZE7 217 aa10.09□□□□□ -0.79
CLCN3-208ENST00000512813 MKRN2Q9H000 416 aaKnown RBP10.09□□□□□ -0.79
CLCN3-208ENST00000512813 ABI2Q9NYB9 513 aaPredicted RBP10.09□□□□□ -0.79
CLCN3-208ENST00000512813 TJP2Q9UDY2 1190 aa10.09□□□□□ -0.79
CLCN3-208ENST00000512813 DDX25Q9UHL0 483 aaKnown RBP10.09□□□□□ -0.79
CLCN3-208ENST00000512813 ANAPC2Q9UJX6 822 aa10.09□□□□□ -0.79
CLCN3-208ENST00000512813 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.09□□□□□ -0.79
CLCN3-208ENST00000512813 PCDHB6Q9Y5E3 794 aa10.09□□□□□ -0.79
CLCN3-208ENST00000512813 ANKHD1Q8IWZ3 2542 aaKnown RBP10.09□□□□□ -0.79
CLCN3-208ENST00000512813 LRRK1Q38SD2 2015 aa10.09□□□□□ -0.79
CLCN3-208ENST00000512813 VPS37CA5D8V6 355 aaPredicted RBP10.08□□□□□ -0.8
CLCN3-208ENST00000512813 HOXC11O43248 304 aaPredicted RBP10.08□□□□□ -0.8
CLCN3-208ENST00000512813 SLITRK3O94933 977 aa10.08□□□□□ -0.8
CLCN3-208ENST00000512813 PFKLP17858 780 aa10.08□□□□□ -0.8
CLCN3-208ENST00000512813 EPHA8P29322 1005 aaPredicted RBP10.08□□□□□ -0.8
CLCN3-208ENST00000512813 RBMS1P29558 406 aaKnown RBP10.08□□□□□ -0.8
CLCN3-208ENST00000512813 NAMPTP43490 491 aa10.08□□□□□ -0.8
CLCN3-208ENST00000512813 CD97P48960 835 aa10.08□□□□□ -0.8
CLCN3-208ENST00000512813 GPR15P49685 360 aa10.08□□□□□ -0.8
CLCN3-208ENST00000512813 DUSP3P51452 185 aaPredicted RBP10.08□□□□□ -0.8
CLCN3-208ENST00000512813 RPL10AP62906 217 aaKnown RBP10.08□□□□□ -0.8
CLCN3-208ENST00000512813 TBR1Q16650 682 aa10.08□□□□□ -0.8
CLCN3-208ENST00000512813 ZNF568Q3ZCX4 644 aa10.08□□□□□ -0.8
CLCN3-208ENST00000512813 FUT11Q495W5 492 aa10.08□□□□□ -0.8
CLCN3-208ENST00000512813 LY6G5CQ5SRR4 150 aa10.08□□□□□ -0.8
CLCN3-208ENST00000512813 SFMBT2Q5VUG0 894 aa10.08□□□□□ -0.8
CLCN3-208ENST00000512813 ADAT2Q7Z6V5 191 aaKnown RBP10.08□□□□□ -0.8
CLCN3-208ENST00000512813 TPH2Q8IWU9 490 aa10.08□□□□□ -0.8
CLCN3-208ENST00000512813 TMEM130Q8N3G9 435 aa10.08□□□□□ -0.8
CLCN3-208ENST00000512813 FSIP1Q8NA03 581 aa10.08□□□□□ -0.8
CLCN3-208ENST00000512813 MCPH1Q8NEM0 835 aa10.08□□□□□ -0.8
CLCN3-208ENST00000512813 CCDC148Q8NFR7 591 aa10.08□□□□□ -0.8
CLCN3-208ENST00000512813 DEPTORQ8TB45 409 aa10.08□□□□□ -0.8
CLCN3-208ENST00000512813 SLC46A1Q96NT5 459 aa10.08□□□□□ -0.8
CLCN3-208ENST00000512813 ADNPQ9H2P0 1102 aa10.08□□□□□ -0.8
CLCN3-208ENST00000512813 C6orf106Q9H6K1 298 aaPredicted RBP10.08□□□□□ -0.8
CLCN3-208ENST00000512813 PLAAQ9Y263 795 aa10.08□□□□□ -0.8
CLCN3-208ENST00000512813 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.08□□□□□ -0.8
CLCN3-208ENST00000512813 NIPBLQ6KC79 2804 aaeCLIP10.07□□□□□ -0.8
CLCN3-208ENST00000512813 CDRT15L2A8MXV6 281 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 SCAMP3O14828 347 aaKnown RBP10.07□□□□□ -0.8
CLCN3-208ENST00000512813 VILLO15195 856 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 LZTS3O60299 673 aaPredicted RBP10.07□□□□□ -0.8
CLCN3-208ENST00000512813 CSO75390 466 aaKnown RBP10.07□□□□□ -0.8
CLCN3-208ENST00000512813 GJB6O95452 261 aa10.07□□□□□ -0.8
CLCN3-208ENST00000512813 CYP11A1P05108 521 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms