RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 SMYD4Q8IYR2 804 aaPredicted RBP15.47■□□□□ 0.07
LETM1-207ENST00000512669 PCED1BQ96HM7 432 aa15.47■□□□□ 0.07
LETM1-207ENST00000512669 SMYD3Q9H7B4 428 aa15.47■□□□□ 0.07
LETM1-207ENST00000512669 GCNT4Q9P109 453 aa15.47■□□□□ 0.07
LETM1-207ENST00000512669 NXF1Q9UBU9 619 aaKnown RBP15.47■□□□□ 0.07
LETM1-207ENST00000512669 WNT6Q9Y6F9 365 aa15.47■□□□□ 0.07
LETM1-207ENST00000512669 ANAPC1Q9H1A4 1944 aa15.47■□□□□ 0.07
LETM1-207ENST00000512669 DCLK1O15075 740 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 ALDH1A2O94788 518 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 BDNFP23560 247 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 PPP3CCP48454 512 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 NUCB2P80303 420 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 ZNF252P-AS1Q0IIN9 211 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 TRPC3Q13507 836 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 NCOA4Q13772 614 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 ZACNQ401N2 412 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 MDH1BQ5I0G3 518 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 CEP135Q66GS9 1140 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 VSTM1Q6UX27 236 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 SV2AQ7L0J3 742 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 SCN4BQ8IWT1 228 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 GUF1Q8N442 669 aaKnown RBP15.46■□□□□ 0.07
LETM1-207ENST00000512669 OR6B3Q8NGW1 331 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 MYCBPAPQ8TBZ2 947 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 TMC2Q8TDI7 906 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 SH3RF2Q8TEC5 729 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 USP33Q8TEY7 942 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 ERCC4Q92889 916 aaPredicted RBP15.46■□□□□ 0.07
LETM1-207ENST00000512669 SPATA17Q96L03 361 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 MAGEC2Q9UBF1 373 aaPredicted RBP15.46■□□□□ 0.07
LETM1-207ENST00000512669 MMP17Q9ULZ9 603 aa15.46■□□□□ 0.07
LETM1-207ENST00000512669 THADAQ6YHU6 1953 aa15.45■□□□□ 0.06
LETM1-207ENST00000512669 CLDN5O00501 218 aa15.45■□□□□ 0.06
LETM1-207ENST00000512669 SLC9A3R1O14745 358 aaPredicted RBP15.45■□□□□ 0.06
LETM1-207ENST00000512669 CALUO43852 315 aaPredicted RBP15.45■□□□□ 0.06
LETM1-207ENST00000512669 PHACTR2O75167 634 aa15.45■□□□□ 0.06
LETM1-207ENST00000512669 PTPN1P18031 435 aaKnown RBP15.45■□□□□ 0.06
LETM1-207ENST00000512669 HDCP19113 662 aa15.45■□□□□ 0.06
LETM1-207ENST00000512669 AP3M2P53677 418 aa15.45■□□□□ 0.06
LETM1-207ENST00000512669 MCCD1P59942 119 aaPredicted RBP15.45■□□□□ 0.06
LETM1-207ENST00000512669 USP46P62068 366 aa15.45■□□□□ 0.06
LETM1-207ENST00000512669 TNNC1P63316 161 aa15.45■□□□□ 0.06
LETM1-207ENST00000512669 MRPS21P82921 87 aaKnown RBP15.45■□□□□ 0.06
LETM1-207ENST00000512669 CYP27A1Q02318 531 aa15.45■□□□□ 0.06
LETM1-207ENST00000512669 LMAN2Q12907 356 aa15.45■□□□□ 0.06
LETM1-207ENST00000512669 BIRC3Q13489 604 aa15.45■□□□□ 0.06
LETM1-207ENST00000512669 SH3PXD2AQ5TCZ1 1133 aa15.45■□□□□ 0.06
LETM1-207ENST00000512669 NAIF1Q69YI7 327 aaPredicted RBP15.45■□□□□ 0.06
LETM1-207ENST00000512669 ABCA7Q8IZY2 2146 aa15.45■□□□□ 0.06
LETM1-207ENST00000512669 ARL14EPQ8N8R7 260 aaPredicted RBP15.45■□□□□ 0.06
LETM1-207ENST00000512669 KDF1Q8NAX2 398 aaPredicted RBP15.45■□□□□ 0.06
LETM1-207ENST00000512669 TTC16Q8NEE8 873 aa15.45■□□□□ 0.06
LETM1-207ENST00000512669 EZH1Q92800 747 aaPredicted RBP15.45■□□□□ 0.06
LETM1-207ENST00000512669 SYAP1Q96A49 352 aaPredicted RBP15.45■□□□□ 0.06
LETM1-207ENST00000512669 SPACA7Q96KW9 195 aa15.45■□□□□ 0.06
LETM1-207ENST00000512669 SLC22A12Q96S37 553 aa15.45■□□□□ 0.06
LETM1-207ENST00000512669 CYP2S1Q96SQ9 504 aa15.45■□□□□ 0.06
LETM1-207ENST00000512669 B3GNT5Q9BYG0 378 aa15.45■□□□□ 0.06
LETM1-207ENST00000512669 SNX25Q9H3E2 840 aa15.45■□□□□ 0.06
LETM1-207ENST00000512669 POLR3BQ9NW08 1133 aaPredicted RBP15.45■□□□□ 0.06
LETM1-207ENST00000512669 EVLQ9UI08 416 aaPredicted RBP15.45■□□□□ 0.06
LETM1-207ENST00000512669 NR2F2P24468 414 aa15.44■□□□□ 0.06
LETM1-207ENST00000512669 ANXA13P27216 316 aa15.44■□□□□ 0.06
LETM1-207ENST00000512669 EIF2DP41214 584 aaKnown RBP15.44■□□□□ 0.06
LETM1-207ENST00000512669 PPP3CAQ08209 521 aa15.44■□□□□ 0.06
LETM1-207ENST00000512669 BYSLQ13895 437 aaKnown RBP15.44■□□□□ 0.06
LETM1-207ENST00000512669 ZNF699Q32M78 642 aa15.44■□□□□ 0.06
LETM1-207ENST00000512669 SPDYCQ5MJ68 293 aa15.44■□□□□ 0.06
LETM1-207ENST00000512669 SPOPLQ6IQ16 392 aa15.44■□□□□ 0.06
LETM1-207ENST00000512669 ANO7Q6IWH7 933 aa15.44■□□□□ 0.06
LETM1-207ENST00000512669 PAQR9Q6ZVX9 377 aa15.44■□□□□ 0.06
LETM1-207ENST00000512669 SPATA20Q8TB22 786 aa15.44■□□□□ 0.06
LETM1-207ENST00000512669 EEF2KMTQ96G04 330 aa15.44■□□□□ 0.06
LETM1-207ENST00000512669 ZNF518BQ9C0D4 1074 aa15.44■□□□□ 0.06
LETM1-207ENST00000512669 TRPM5Q9NZQ8 1165 aa15.44■□□□□ 0.06
LETM1-207ENST00000512669 C2orf78A6NCI8 922 aa15.43■□□□□ 0.06
LETM1-207ENST00000512669 A8MXQ7 604 aa15.43■□□□□ 0.06
LETM1-207ENST00000512669 IKBKBO14920 756 aa15.43■□□□□ 0.06
LETM1-207ENST00000512669 TRIM66O15016 1216 aa15.43■□□□□ 0.06
LETM1-207ENST00000512669 MAPK13O15264 365 aa15.43■□□□□ 0.06
LETM1-207ENST00000512669 TRIM49P0CI25 452 aa15.43■□□□□ 0.06
LETM1-207ENST00000512669 TRIM49CP0CI26 452 aa15.43■□□□□ 0.06
LETM1-207ENST00000512669 OPRD1P41143 372 aa15.43■□□□□ 0.06
LETM1-207ENST00000512669 PRCPP42785 496 aa15.43■□□□□ 0.06
LETM1-207ENST00000512669 VAMP7P51809 220 aa15.43■□□□□ 0.06
LETM1-207ENST00000512669 FOXC1Q12948 553 aa15.43■□□□□ 0.06
LETM1-207ENST00000512669 CRY1Q16526 586 aa15.43■□□□□ 0.06
LETM1-207ENST00000512669 C2orf27AQ580R0 203 aa15.43■□□□□ 0.06
LETM1-207ENST00000512669 SCARA5Q6ZMJ2 495 aa15.43■□□□□ 0.06
LETM1-207ENST00000512669 DENND5BQ6ZUT9 1274 aa15.43■□□□□ 0.06
LETM1-207ENST00000512669 DDX42Q86XP3 938 aaKnown RBP eCLIP15.43■□□□□ 0.06
LETM1-207ENST00000512669 B3GALNT2Q8NCR0 500 aa15.43■□□□□ 0.06
LETM1-207ENST00000512669 WHAMMQ8TF30 809 aa15.43■□□□□ 0.06
LETM1-207ENST00000512669 CCDC47Q96A33 483 aaKnown RBP15.43■□□□□ 0.06
LETM1-207ENST00000512669 ADAM33Q9BZ11 813 aa15.43■□□□□ 0.06
LETM1-207ENST00000512669 TPSD1Q9BZJ3 242 aa15.43■□□□□ 0.06
LETM1-207ENST00000512669 APOBEC3GQ9HC16 384 aaKnown RBP15.43■□□□□ 0.06
LETM1-207ENST00000512669 POLMQ9NP87 494 aaPredicted RBP15.43■□□□□ 0.06
LETM1-207ENST00000512669 HMGXB4Q9UGU5 601 aa15.43■□□□□ 0.06
LETM1-207ENST00000512669 FRMD4BQ9Y2L6 1034 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms