RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 CYFIP2Q96F07 1278 aa15.68■□□□□ 0.1
UBE2D3-228ENST00000508974 SEMA4AQ9H3S1 761 aa15.68■□□□□ 0.1
UBE2D3-228ENST00000508974 CCSER2Q9H7U1 834 aa15.68■□□□□ 0.1
UBE2D3-228ENST00000508974 CYP3A43Q9HB55 503 aa15.68■□□□□ 0.1
UBE2D3-228ENST00000508974 RAB20Q9NX57 234 aa15.68■□□□□ 0.1
UBE2D3-228ENST00000508974 CFAP97Q9P2B7 532 aa15.68■□□□□ 0.1
UBE2D3-228ENST00000508974 PCDHGA2Q9Y5H1 932 aa15.68■□□□□ 0.1
UBE2D3-228ENST00000508974 RIF1Q5UIP0 2472 aaKnown RBP15.68■□□□□ 0.1
UBE2D3-228ENST00000508974 MYOFQ9NZM1 2061 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 FAM186AA6NE01 2351 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 CHURC1-FNTBB4DL54 471 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 PSMA7O14818 248 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 SLC16A3O15427 465 aaKnown RBP15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 COCHO43405 550 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 STX10O60499 249 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 CILPO75339 1184 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 IRF1P10914 325 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 TDGF1P13385 188 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 GTF2H1P32780 548 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 FNTBP49356 437 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 PGFP49763 221 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 SLC7A9P82251 487 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 FKBP3Q00688 224 aaKnown RBP15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 LRRC63Q05C16 580 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 ENPEPQ07075 957 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 LPAL2Q16609 132 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 COBLL1Q53SF7 1204 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 TMEM196Q5HYL7 178 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 CLEC20AQ6ZU45 233 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 DCLK2Q8N568 766 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 ZBTB44Q8NCP5 570 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 TATDN2Q93075 761 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 P2RY13Q9BPV8 354 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 IER2Q9BTL4 223 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 POLR3BQ9NW08 1133 aaPredicted RBP15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 CTNND2Q9UQB3 1225 aa15.67■□□□□ 0.1
UBE2D3-228ENST00000508974 ZNF292O60281 2723 aa15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 TRDMT1O14717 391 aaKnown RBP15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 RNF40O75150 1001 aa15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 NFATC1O95644 943 aa15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 OLFM2O95897 454 aa15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 PFKLP17858 780 aa15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 AMPD2Q01433 879 aa15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 LRMPQ12912 555 aa15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 CCDC40Q4G0X9 1142 aa15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 HECTD3Q5T447 861 aa15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 PPP1R26Q5T8A7 1209 aaPredicted RBP15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 KIAA2013Q8IYS2 634 aa15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 SUMF1Q8NBK3 374 aa15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 OVCA2Q8WZ82 227 aa15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 NELL1Q92832 810 aa15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 CD101Q93033 1021 aa15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 HEXIM2Q96MH2 286 aaKnown RBP15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 HNRNPABQ99729 332 aaKnown RBP15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 NACA2Q9H009 215 aa15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 CSNK1G1Q9HCP0 422 aa15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 CISHQ9NSE2 258 aa15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 ARMCX3Q9UH62 379 aaPredicted RBP15.66■□□□□ 0.1
UBE2D3-228ENST00000508974 K7ESF4 209 aa15.65■□□□□ 0.1
UBE2D3-228ENST00000508974 CYP26A1O43174 497 aa15.65■□□□□ 0.1
UBE2D3-228ENST00000508974 TCF3P15923 654 aa15.65■□□□□ 0.1
UBE2D3-228ENST00000508974 ACO1P21399 889 aaKnown RBP15.65■□□□□ 0.1
UBE2D3-228ENST00000508974 BMP6P22004 513 aa15.65■□□□□ 0.1
UBE2D3-228ENST00000508974 PXNP49023 591 aaPredicted RBP15.65■□□□□ 0.1
UBE2D3-228ENST00000508974 NRLP54845 237 aa15.65■□□□□ 0.1
UBE2D3-228ENST00000508974 STX17P56962 302 aa15.65■□□□□ 0.1
UBE2D3-228ENST00000508974 NR1H3Q13133 447 aa15.65■□□□□ 0.1
UBE2D3-228ENST00000508974 SRSF5Q13243 272 aaKnown RBP15.65■□□□□ 0.1
UBE2D3-228ENST00000508974 PRR23BQ6ZRT6 265 aa15.65■□□□□ 0.1
UBE2D3-228ENST00000508974 ZC3H3Q8IXZ2 948 aaKnown RBP15.65■□□□□ 0.1
UBE2D3-228ENST00000508974 NELFBQ8WX92 580 aa15.65■□□□□ 0.1
UBE2D3-228ENST00000508974 NCDNQ9UBB6 729 aa15.65■□□□□ 0.1
UBE2D3-228ENST00000508974 CIZ1Q9ULV3 898 aaPredicted RBP15.65■□□□□ 0.1
UBE2D3-228ENST00000508974 SMG5Q9UPR3 1016 aaKnown RBP15.65■□□□□ 0.1
UBE2D3-228ENST00000508974 HHLA1C9JL84 531 aa15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 LILRB5O75023 590 aa15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 CYP17A1P05093 508 aa15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 PTPRZ1P23471 2315 aaPredicted RBP15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 SEC13P55735 322 aa15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 CAMK4Q16566 473 aa15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 SYNPOQ8N3V7 929 aa15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 SLC4A11Q8NBS3 891 aa15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 RPLP0P6Q8NHW5 317 aa15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 RUBCNQ92622 972 aa15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 EZH1Q92800 747 aaPredicted RBP15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 WBP2Q969T9 261 aa15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 SLC35C1Q96A29 364 aa15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 DHTKD1Q96HY7 919 aaPredicted RBP15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 ZFRQ96KR1 1074 aaKnown RBP15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 DUSP9Q99956 384 aaKnown RBP15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 FAM126AQ9BYI3 521 aaPredicted RBP15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 GTPBP4Q9BZE4 634 aaKnown RBP15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 DNAI2Q9GZS0 605 aa15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 FBXO44Q9H4M3 255 aa15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 TLR8Q9NR97 1041 aaKnown RBP15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 IL37Q9NZH6 218 aa15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 NUDT5Q9UKK9 219 aa15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 SH3BP1Q9Y3L3 701 aa15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 GVINP1Q7Z2Y8 2422 aa15.64■□□□□ 0.09
UBE2D3-228ENST00000508974 EML5Q05BV3 1969 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms