RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 MESP2Q0VG99 397 aa17.2■□□□□ 0.34
LMNA-222ENST00000508500 PNOCQ13519 176 aa17.2■□□□□ 0.34
LMNA-222ENST00000508500 SIM2Q14190 667 aaPredicted RBP17.2■□□□□ 0.34
LMNA-222ENST00000508500 SNX30Q5VWJ9 437 aa17.2■□□□□ 0.34
LMNA-222ENST00000508500 PRR23BQ6ZRT6 265 aa17.2■□□□□ 0.34
LMNA-222ENST00000508500 FILIP1Q7Z7B0 1213 aa17.2■□□□□ 0.34
LMNA-222ENST00000508500 FMR1NBQ8N0W7 255 aaPredicted RBP17.2■□□□□ 0.34
LMNA-222ENST00000508500 SLC2A14Q8TDB8 520 aa17.2■□□□□ 0.34
LMNA-222ENST00000508500 WHAMMQ8TF30 809 aa17.2■□□□□ 0.34
LMNA-222ENST00000508500 FBXO32Q969P5 355 aa17.2■□□□□ 0.34
LMNA-222ENST00000508500 WBP2Q969T9 261 aa17.2■□□□□ 0.34
LMNA-222ENST00000508500 EEF2KMTQ96G04 330 aa17.2■□□□□ 0.34
LMNA-222ENST00000508500 TNIP3Q96KP6 325 aa17.2■□□□□ 0.34
LMNA-222ENST00000508500 SLITRK1Q96PX8 696 aa17.2■□□□□ 0.34
LMNA-222ENST00000508500 CSNK1G1Q9HCP0 422 aa17.2■□□□□ 0.34
LMNA-222ENST00000508500 DMAP1Q9NPF5 467 aaPredicted RBP17.2■□□□□ 0.34
LMNA-222ENST00000508500 KRT82Q9NSB4 513 aa17.2■□□□□ 0.34
LMNA-222ENST00000508500 FAM49BQ9NUQ9 324 aa17.2■□□□□ 0.34
LMNA-222ENST00000508500 CHMP5Q9NZZ3 219 aa17.2■□□□□ 0.34
LMNA-222ENST00000508500 CEP192Q8TEP8 1941 aa17.19■□□□□ 0.34
LMNA-222ENST00000508500 COCHO43405 550 aa17.19■□□□□ 0.34
LMNA-222ENST00000508500 CLSTN1O94985 981 aa17.19■□□□□ 0.34
LMNA-222ENST00000508500 KIF20AO95235 890 aa17.19■□□□□ 0.34
LMNA-222ENST00000508500 CYP17A1P05093 508 aa17.19■□□□□ 0.34
LMNA-222ENST00000508500 CNR2P34972 360 aa17.19■□□□□ 0.34
LMNA-222ENST00000508500 PDE6CP51160 858 aa17.19■□□□□ 0.34
LMNA-222ENST00000508500 AMPD2Q01433 879 aa17.19■□□□□ 0.34
LMNA-222ENST00000508500 INCA1Q0VD86 236 aa17.19■□□□□ 0.34
LMNA-222ENST00000508500 ADAM9Q13443 819 aa17.19■□□□□ 0.34
LMNA-222ENST00000508500 LAIR1Q6GTX8 287 aa17.19■□□□□ 0.34
LMNA-222ENST00000508500 INTS8Q75QN2 995 aaKnown RBP17.19■□□□□ 0.34
LMNA-222ENST00000508500 UNC93AQ86WB7 457 aa17.19■□□□□ 0.34
LMNA-222ENST00000508500 FAM186BQ8IYM0 893 aa17.19■□□□□ 0.34
LMNA-222ENST00000508500 ENGASEQ8NFI3 743 aa17.19■□□□□ 0.34
LMNA-222ENST00000508500 RPLP0P6Q8NHW5 317 aa17.19■□□□□ 0.34
LMNA-222ENST00000508500 OVCA2Q8WZ82 227 aa17.19■□□□□ 0.34
LMNA-222ENST00000508500 CCDC47Q96A33 483 aaKnown RBP17.19■□□□□ 0.34
LMNA-222ENST00000508500 SMARCD1Q96GM5 515 aa17.19■□□□□ 0.34
LMNA-222ENST00000508500 CCSER2Q9H7U1 834 aa17.19■□□□□ 0.34
LMNA-222ENST00000508500 CFAP97Q9P2B7 532 aa17.19■□□□□ 0.34
LMNA-222ENST00000508500 CACNA1BQ00975 2339 aa17.19■□□□□ 0.34
LMNA-222ENST00000508500 ACACBO00763 2458 aa17.18■□□□□ 0.34
LMNA-222ENST00000508500 PRR5-ARHGAP8B1AHC4 643 aa17.18■□□□□ 0.34
LMNA-222ENST00000508500 HHLA1C9JL84 531 aa17.18■□□□□ 0.34
LMNA-222ENST00000508500 K7EQS6 105 aa17.18■□□□□ 0.34
LMNA-222ENST00000508500 NFATC1O95644 943 aa17.18■□□□□ 0.34
LMNA-222ENST00000508500 MBL2P11226 248 aaPredicted RBP17.18■□□□□ 0.34
LMNA-222ENST00000508500 CHRM1P11229 460 aaPredicted RBP17.18■□□□□ 0.34
LMNA-222ENST00000508500 PSMC2P35998 433 aaKnown RBP17.18■□□□□ 0.34
LMNA-222ENST00000508500 SLC6A11P48066 632 aa17.18■□□□□ 0.34
LMNA-222ENST00000508500 MAP3K7CLP57077 242 aa17.18■□□□□ 0.34
LMNA-222ENST00000508500 ARHGAP8P85298 464 aa17.18■□□□□ 0.34
LMNA-222ENST00000508500 LMNB2Q03252 620 aa17.18■□□□□ 0.34
LMNA-222ENST00000508500 SPEM2Q0P670 501 aa17.18■□□□□ 0.34
LMNA-222ENST00000508500 RHBDF2Q6PJF5 856 aa17.18■□□□□ 0.34
LMNA-222ENST00000508500 GPRIN1Q7Z2K8 1008 aa17.18■□□□□ 0.34
LMNA-222ENST00000508500 C12orf40Q86WS4 652 aa17.18■□□□□ 0.34
LMNA-222ENST00000508500 SFTPA1Q8IWL2 248 aa17.18■□□□□ 0.34
LMNA-222ENST00000508500 KIAA1958Q8N8K9 716 aa17.18■□□□□ 0.34
LMNA-222ENST00000508500 SEMA4DQ92854 862 aa17.18■□□□□ 0.34
LMNA-222ENST00000508500 ERCC4Q92889 916 aaPredicted RBP17.18■□□□□ 0.34
LMNA-222ENST00000508500 MMRN2Q9H8L6 949 aa17.18■□□□□ 0.34
LMNA-222ENST00000508500 GMIPQ9P107 970 aa17.18■□□□□ 0.34
LMNA-222ENST00000508500 ATP8B3O60423 1300 aa17.18■□□□□ 0.34
LMNA-222ENST00000508500 ATG13O75143 517 aa17.17■□□□□ 0.34
LMNA-222ENST00000508500 RETP07949 1114 aa17.17■□□□□ 0.34
LMNA-222ENST00000508500 P4HA1P13674 534 aa17.17■□□□□ 0.34
LMNA-222ENST00000508500 SDHBP21912 280 aa17.17■□□□□ 0.34
LMNA-222ENST00000508500 ADORA2BP29275 332 aa17.17■□□□□ 0.34
LMNA-222ENST00000508500 PRCPP42785 496 aa17.17■□□□□ 0.34
LMNA-222ENST00000508500 ENPEPQ07075 957 aa17.17■□□□□ 0.34
LMNA-222ENST00000508500 NR1H3Q13133 447 aa17.17■□□□□ 0.34
LMNA-222ENST00000508500 DHCR24Q15392 516 aa17.17■□□□□ 0.34
LMNA-222ENST00000508500 EDRF1Q3B7T1 1238 aa17.17■□□□□ 0.34
LMNA-222ENST00000508500 FBXO43Q4G163 708 aa17.17■□□□□ 0.34
LMNA-222ENST00000508500 CLEC20AQ6ZU45 233 aa17.17■□□□□ 0.34
LMNA-222ENST00000508500 FAM160A2Q8N612 972 aaPredicted RBP17.17■□□□□ 0.34
LMNA-222ENST00000508500 PDZD8Q8NEN9 1154 aa17.17■□□□□ 0.34
LMNA-222ENST00000508500 HHIPQ96QV1 700 aa17.17■□□□□ 0.34
LMNA-222ENST00000508500 COMMD8Q9NX08 183 aa17.17■□□□□ 0.34
LMNA-222ENST00000508500 OSER1Q9NX31 292 aa17.17■□□□□ 0.34
LMNA-222ENST00000508500 GMEB2Q9UKD1 530 aa17.17■□□□□ 0.34
LMNA-222ENST00000508500 PLXND1Q9Y4D7 1925 aa17.17■□□□□ 0.34
LMNA-222ENST00000508500 CCDC163A0A0D9SF12 145 aa17.16■□□□□ 0.34
LMNA-222ENST00000508500 LRP3O75074 770 aa17.16■□□□□ 0.34
LMNA-222ENST00000508500 CILPO75339 1184 aa17.16■□□□□ 0.34
LMNA-222ENST00000508500 RPL13P26373 211 aaKnown RBP17.16■□□□□ 0.34
LMNA-222ENST00000508500 PMS1P54277 932 aaKnown RBP17.16■□□□□ 0.34
LMNA-222ENST00000508500 NUCB2P80303 420 aa17.16■□□□□ 0.34
LMNA-222ENST00000508500 HECTD3Q5T447 861 aa17.16■□□□□ 0.34
LMNA-222ENST00000508500 SYT13Q7L8C5 426 aa17.16■□□□□ 0.34
LMNA-222ENST00000508500 SPATA20Q8TB22 786 aa17.16■□□□□ 0.34
LMNA-222ENST00000508500 SECISBP2LQ93073 1101 aaKnown RBP17.16■□□□□ 0.34
LMNA-222ENST00000508500 HNRNPABQ99729 332 aaKnown RBP17.16■□□□□ 0.34
LMNA-222ENST00000508500 CYP3A43Q9HB55 503 aa17.16■□□□□ 0.34
LMNA-222ENST00000508500 TMEM8AQ9HCN3 771 aa17.16■□□□□ 0.34
LMNA-222ENST00000508500 RAB23Q9ULC3 237 aa17.16■□□□□ 0.34
LMNA-222ENST00000508500 USP18Q9UMW8 372 aa17.16■□□□□ 0.34
LMNA-222ENST00000508500 SLC8A2Q9UPR5 921 aa17.16■□□□□ 0.34
LMNA-222ENST00000508500 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms