RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 GMIPQ9P107 970 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 AJAP1Q9UKB5 411 aaPredicted RBP15.81■□□□□ 0.12
RNF4-210ENST00000508235 USP3Q9Y6I4 520 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 C5orf42Q9H799 3197 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 A0A1W2PQC6 194 aa15.8■□□□□ 0.12
RNF4-210ENST00000508235 C2orf78A6NCI8 922 aa15.8■□□□□ 0.12
RNF4-210ENST00000508235 HEPACAM2A8MVW5 462 aa15.8■□□□□ 0.12
RNF4-210ENST00000508235 CKMP06732 381 aa15.8■□□□□ 0.12
RNF4-210ENST00000508235 ZDHHC11BP0C7U3 371 aa15.8■□□□□ 0.12
RNF4-210ENST00000508235 KRT9P35527 623 aa15.8■□□□□ 0.12
RNF4-210ENST00000508235 KLK7P49862 253 aa15.8■□□□□ 0.12
RNF4-210ENST00000508235 TKTL1P51854 596 aa15.8■□□□□ 0.12
RNF4-210ENST00000508235 PFKPQ01813 784 aa15.8■□□□□ 0.12
RNF4-210ENST00000508235 HECTD3Q5T447 861 aa15.8■□□□□ 0.12
RNF4-210ENST00000508235 POTEHQ6S545 545 aa15.8■□□□□ 0.12
RNF4-210ENST00000508235 TADA2BQ86TJ2 420 aa15.8■□□□□ 0.12
RNF4-210ENST00000508235 FMNL3Q8IVF7 1028 aa15.8■□□□□ 0.12
RNF4-210ENST00000508235 MFSD6LQ8IWD5 586 aa15.8■□□□□ 0.12
RNF4-210ENST00000508235 SIX6OS1Q8N1H7 587 aa15.8■□□□□ 0.12
RNF4-210ENST00000508235 ARL14EPQ8N8R7 260 aaPredicted RBP15.8■□□□□ 0.12
RNF4-210ENST00000508235 SLC35F5Q8WV83 523 aa15.8■□□□□ 0.12
RNF4-210ENST00000508235 HSFY1Q96LI6 401 aa15.8■□□□□ 0.12
RNF4-210ENST00000508235 TRMT61BQ9BVS5 477 aaKnown RBP15.8■□□□□ 0.12
RNF4-210ENST00000508235 SLC2A4RGQ9NR83 387 aa15.8■□□□□ 0.12
RNF4-210ENST00000508235 THG1LQ9NWX6 298 aaKnown RBP15.8■□□□□ 0.12
RNF4-210ENST00000508235 CHORDC1Q9UHD1 332 aaPredicted RBP15.8■□□□□ 0.12
RNF4-210ENST00000508235 PCDHGC3Q9UN70 934 aa15.8■□□□□ 0.12
RNF4-210ENST00000508235 CEP83Q9Y592 693 aa15.8■□□□□ 0.12
RNF4-210ENST00000508235 OLFM2O95897 454 aa15.79■□□□□ 0.12
RNF4-210ENST00000508235 OAS1P00973 400 aaKnown RBP15.79■□□□□ 0.12
RNF4-210ENST00000508235 TPM3P06753 285 aa15.79■□□□□ 0.12
RNF4-210ENST00000508235 CLCN1P35523 988 aa15.79■□□□□ 0.12
RNF4-210ENST00000508235 VIPR2P41587 438 aa15.79■□□□□ 0.12
RNF4-210ENST00000508235 STAT1P42224 750 aa15.79■□□□□ 0.12
RNF4-210ENST00000508235 ACADSBP45954 432 aa15.79■□□□□ 0.12
RNF4-210ENST00000508235 UBASH3AP57075 661 aa15.79■□□□□ 0.12
RNF4-210ENST00000508235 SNX16P57768 344 aa15.79■□□□□ 0.12
RNF4-210ENST00000508235 FANCCQ00597 558 aa15.79■□□□□ 0.12
RNF4-210ENST00000508235 SIGLEC14Q08ET2 396 aa15.79■□□□□ 0.12
RNF4-210ENST00000508235 VITQ6UXI7 678 aa15.79■□□□□ 0.12
RNF4-210ENST00000508235 CACNA2D4Q7Z3S7 1137 aa15.79■□□□□ 0.12
RNF4-210ENST00000508235 DDX42Q86XP3 938 aaKnown RBP eCLIP15.79■□□□□ 0.12
RNF4-210ENST00000508235 SCML4Q8N228 414 aa15.79■□□□□ 0.12
RNF4-210ENST00000508235 BPIFB1Q8TDL5 484 aa15.79■□□□□ 0.12
RNF4-210ENST00000508235 STK32AQ8WU08 396 aa15.79■□□□□ 0.12
RNF4-210ENST00000508235 KHSRPQ92945 711 aaKnown RBP eCLIP15.79■□□□□ 0.126e-9■■□□□ 13.6
RNF4-210ENST00000508235 CDK5RAP1Q96SZ6 601 aaKnown RBP15.79■□□□□ 0.12
RNF4-210ENST00000508235 RPP25Q9BUL9 199 aaKnown RBP15.79■□□□□ 0.12
RNF4-210ENST00000508235 NACA2Q9H009 215 aa15.79■□□□□ 0.12
RNF4-210ENST00000508235 NLRC4Q9NPP4 1024 aa15.79■□□□□ 0.12
RNF4-210ENST00000508235 CNGB3Q9NQW8 809 aa15.79■□□□□ 0.12
RNF4-210ENST00000508235 NCOR1O75376 2440 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 FBXO21O94952 628 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 PRAMEF12O95522 483 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 ZBED1O96006 694 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 CCDC172P0C7W6 258 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 RALAP11233 206 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 TCF3P15923 654 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 SOX5P35711 763 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 GPD2P43304 727 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 SLC7A9P82251 487 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 PLCB2Q00722 1185 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 FCHO2Q0JRZ9 810 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 NR1I3Q14994 352 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 ARHGAP29Q52LW3 1261 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 PM20D1Q6GTS8 502 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 SLC47A2Q86VL8 602 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 ZNF276Q8N554 614 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 ST13P5Q8NFI4 369 aaPredicted RBP15.78■□□□□ 0.12
RNF4-210ENST00000508235 IRF7Q92985 503 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 USP13Q92995 863 aaPredicted RBP15.78■□□□□ 0.12
RNF4-210ENST00000508235 NAP1L5Q96NT1 182 aaPredicted RBP15.78■□□□□ 0.12
RNF4-210ENST00000508235 NOX5Q96PH1 765 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 CYP2S1Q96SQ9 504 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 C1QTNF1Q9BXJ1 281 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 PLA2G2FQ9BZM2 168 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 LHX5Q9H2C1 402 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 PDCL3Q9H2J4 239 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 BRD9Q9H8M2 597 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 CYLDQ9NQC7 956 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 CLIC5Q9NZA1 410 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 WNT16Q9UBV4 365 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 FBXL21Q9UKT6 434 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 ARHGAP26Q9UNA1 814 aa15.78■□□□□ 0.12
RNF4-210ENST00000508235 TULP2O00295 520 aa15.77■□□□□ 0.12
RNF4-210ENST00000508235 ZNF263O14978 683 aa15.77■□□□□ 0.12
RNF4-210ENST00000508235 EPHB6O15197 1021 aa15.77■□□□□ 0.12
RNF4-210ENST00000508235 CHADO15335 359 aa15.77■□□□□ 0.12
RNF4-210ENST00000508235 TEX33O43247 280 aa15.77■□□□□ 0.12
RNF4-210ENST00000508235 CALCAP01258 141 aa15.77■□□□□ 0.12
RNF4-210ENST00000508235 CYP11B1P15538 503 aa15.77■□□□□ 0.12
RNF4-210ENST00000508235 ATP5C1P36542 298 aaKnown RBP15.77■□□□□ 0.12
RNF4-210ENST00000508235 JAM2P57087 298 aa15.77■□□□□ 0.12
RNF4-210ENST00000508235 GPC5P78333 572 aa15.77■□□□□ 0.12
RNF4-210ENST00000508235 ADIGQ0VDE8 80 aa15.77■□□□□ 0.12
RNF4-210ENST00000508235 GRM2Q14416 872 aa15.77■□□□□ 0.12
RNF4-210ENST00000508235 PMF1Q6P1K2 205 aa15.77■□□□□ 0.12
RNF4-210ENST00000508235 CC2D1AQ6P1N0 951 aaPredicted RBP15.77■□□□□ 0.12
RNF4-210ENST00000508235 DENND1BQ6P3S1 775 aa15.77■□□□□ 0.12
RNF4-210ENST00000508235 KLHDC10Q6PID8 442 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms