RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 MYO1EQ12965 1108 aa14.24□□□□□ -0.13
DDX41-206ENST00000506965 LY6G5CQ5SRR4 150 aa14.24□□□□□ -0.13
DDX41-206ENST00000506965 SH3PXD2AQ5TCZ1 1133 aa14.24□□□□□ -0.13
DDX41-206ENST00000506965 CNNM4Q6P4Q7 775 aa14.24□□□□□ -0.13
DDX41-206ENST00000506965 ARMCX6Q7L4S7 300 aa14.24□□□□□ -0.13
DDX41-206ENST00000506965 NELFCDQ8IXH7 590 aa14.24□□□□□ -0.13
DDX41-206ENST00000506965 CCDC65Q8IXS2 484 aa14.24□□□□□ -0.13
DDX41-206ENST00000506965 CCDC127Q96BQ5 260 aa14.24□□□□□ -0.13
DDX41-206ENST00000506965 TNMDQ9H2S6 317 aa14.24□□□□□ -0.13
DDX41-206ENST00000506965 CCSER2Q9H7U1 834 aa14.24□□□□□ -0.13
DDX41-206ENST00000506965 IL37Q9NZH6 218 aa14.24□□□□□ -0.13
DDX41-206ENST00000506965 TFIP11Q9UBB9 837 aaKnown RBP14.24□□□□□ -0.13
DDX41-206ENST00000506965 HMGXB4Q9UGU5 601 aa14.24□□□□□ -0.13
DDX41-206ENST00000506965 NBEAQ8NFP9 2946 aa14.24□□□□□ -0.13
DDX41-206ENST00000506965 DSPP15924 2871 aaKnown RBP14.24□□□□□ -0.13
DDX41-206ENST00000506965 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.23□□□□□ -0.13
DDX41-206ENST00000506965 TRIM66O15016 1216 aa14.23□□□□□ -0.13
DDX41-206ENST00000506965 EIF3DO15371 548 aaKnown RBP eCLIP14.23□□□□□ -0.13
DDX41-206ENST00000506965 ZDHHC11BP0C7U3 371 aa14.23□□□□□ -0.13
DDX41-206ENST00000506965 PFKLP17858 780 aa14.23□□□□□ -0.13
DDX41-206ENST00000506965 TXLNAP40222 546 aa14.23□□□□□ -0.13
DDX41-206ENST00000506965 MRPS21P82921 87 aaKnown RBP14.23□□□□□ -0.13
DDX41-206ENST00000506965 ZNF252P-AS1Q0IIN9 211 aa14.23□□□□□ -0.13
DDX41-206ENST00000506965 ORC1Q13415 861 aa14.23□□□□□ -0.13
DDX41-206ENST00000506965 WDR72Q3MJ13 1102 aa14.23□□□□□ -0.13
DDX41-206ENST00000506965 FAM26FQ5R3K3 315 aa14.23□□□□□ -0.13
DDX41-206ENST00000506965 TDRD10Q5VZ19 366 aaKnown RBP14.23□□□□□ -0.13
DDX41-206ENST00000506965 HS2ST1Q7LGA3 356 aa14.23□□□□□ -0.13
DDX41-206ENST00000506965 BBS7Q8IWZ6 715 aa14.23□□□□□ -0.13
DDX41-206ENST00000506965 TMEFF1Q8IYR6 380 aa14.23□□□□□ -0.13
DDX41-206ENST00000506965 B3GALNT2Q8NCR0 500 aa14.23□□□□□ -0.13
DDX41-206ENST00000506965 OR6B3Q8NGW1 331 aa14.23□□□□□ -0.13
DDX41-206ENST00000506965 DHX58Q96C10 678 aa14.23□□□□□ -0.13
DDX41-206ENST00000506965 CEP295NLQ96MC4 621 aa14.23□□□□□ -0.13
DDX41-206ENST00000506965 BLZF1Q9H2G9 400 aa14.23□□□□□ -0.13
DDX41-206ENST00000506965 CHORDC1Q9UHD1 332 aaPredicted RBP14.23□□□□□ -0.13
DDX41-206ENST00000506965 FAM92AA1XBS5 289 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 KIAA0391O15091 583 aaKnown RBP14.22□□□□□ -0.13
DDX41-206ENST00000506965 STAU1O95793 577 aaKnown RBP14.22□□□□□ -0.13
DDX41-206ENST00000506965 ABL1P00519 1130 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 PROS1P07225 676 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 MBL2P11226 248 aaPredicted RBP14.22□□□□□ -0.13
DDX41-206ENST00000506965 HOXB3P14651 431 aaPredicted RBP14.22□□□□□ -0.13
DDX41-206ENST00000506965 DHPSP49366 369 aaPredicted RBP14.22□□□□□ -0.13
DDX41-206ENST00000506965 FOXC1Q12948 553 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 NR1H3Q13133 447 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 USP39Q53GS9 565 aaKnown RBP14.22□□□□□ -0.13
DDX41-206ENST00000506965 GPRIN1Q7Z2K8 1008 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 CYP2U1Q7Z449 544 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 FAM35AQ86V20 835 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 TTC30AQ86WT1 665 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 TMEM25Q86YD3 366 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 GRAMD1CQ8IYS0 662 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 FUKQ8N0W3 1084 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 NAT16Q8N8M0 369 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 DEFB124Q8NES8 71 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 PIGKQ92643 395 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 GATA6Q92908 595 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 ERLEC1Q96DZ1 483 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 PNKPQ96T60 521 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 ACOX2Q99424 681 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 SMOQ99835 787 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 C7orf25Q9BPX7 421 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 OSER1Q9NX31 292 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 GMIPQ9P107 970 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 NXF1Q9UBU9 619 aaKnown RBP14.22□□□□□ -0.13
DDX41-206ENST00000506965 CKAP5Q14008 2032 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 PTPRBP23467 1997 aa14.22□□□□□ -0.13
DDX41-206ENST00000506965 NUMA1Q14980 2115 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 LOC400499M0QZD8 3231 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 LRRIQ3A6PVS8 624 aaPredicted RBP14.21□□□□□ -0.13
DDX41-206ENST00000506965 KLRC4O43908 158 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 C4BPAP04003 597 aaKnown RBP14.21□□□□□ -0.13
DDX41-206ENST00000506965 ADH5P11766 374 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 GABRG2P18507 467 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 TNNI1P19237 187 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 PDCP20941 246 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 ITPKAP23677 461 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 ANXA13P27216 316 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 EIF2DP41214 584 aaKnown RBP14.21□□□□□ -0.13
DDX41-206ENST00000506965 SLC5A3P53794 718 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 FAM193AP78312 1265 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 ASIC1P78348 528 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 DLG4P78352 724 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 CUL4BQ13620 913 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 SURF1Q15526 300 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 MAPRE1Q15691 268 aaKnown RBP14.21□□□□□ -0.13
DDX41-206ENST00000506965 BMT2Q1RMZ1 405 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 C1orf220Q5T0J3 134 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 SNX30Q5VWJ9 437 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 PEAR1Q5VY43 1037 aaPredicted RBP14.21□□□□□ -0.13
DDX41-206ENST00000506965 UNQ6494/PRO21346Q6UXR6 183 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 NUP93Q8N1F7 819 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 DEFB119Q8N690 84 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 KIAA1958Q8N8K9 716 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 OR2I1PQ8NGU4 316 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 ELOVL4Q9GZR5 314 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 SNX25Q9H3E2 840 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 VRTNQ9H8Y1 702 aa14.21□□□□□ -0.13
DDX41-206ENST00000506965 TMEM9BQ9NQ34 198 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms