RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 TNNC2P02585 160 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 PF4P02776 101 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 PROCP04070 461 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 IL9P15248 144 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 NR2F2P24468 414 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 OR1D2P34982 312 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 EIF4A3P38919 411 aaKnown RBP10.19□□□□□ -0.78
CLCN3-205ENST00000506924 PREPP48147 710 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 DLG4P78352 724 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 POU5F1Q01860 360 aaKnown RBP10.19□□□□□ -0.78
CLCN3-205ENST00000506924 BFSP1Q12934 665 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 ADAM9Q13443 819 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 PSMD6Q15008 389 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 LEXMQ3ZCV2 418 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 RARS2Q5T160 578 aaKnown RBP10.19□□□□□ -0.78
CLCN3-205ENST00000506924 ANKRD40Q6AI12 368 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 ANKRD54Q6NXT1 300 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 SYCE2Q6PIF2 218 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 ELOA2Q8IYF1 753 aaPredicted RBP10.19□□□□□ -0.78
CLCN3-205ENST00000506924 ADSSL1Q8N142 457 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 C2CD4AQ8NCU7 369 aaPredicted RBP10.19□□□□□ -0.78
CLCN3-205ENST00000506924 GPT2Q8TD30 523 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 ELMO3Q96BJ8 720 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 ANKRD36BP1Q96IX9 119 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 MSLNLQ96KJ4 702 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 SENP8Q96LD8 212 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 MFSD14AQ96MC6 490 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 FNBP1Q96RU3 617 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 TSPAN18Q96SJ8 248 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 CGRRF1Q99675 332 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 CLSTN2Q9H4D0 955 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 RXFP1Q9HBX9 757 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 INTS13Q9NVM9 706 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 SIX4Q9UIU6 781 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 TRAF3IP3Q9Y228 551 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 FRMD4BQ9Y2L6 1034 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 PCDHB5Q9Y5E4 795 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 CDY1Q9Y6F8 540 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 BRWD1Q9NSI6 2320 aa10.19□□□□□ -0.78
CLCN3-205ENST00000506924 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.18□□□□□ -0.78
CLCN3-205ENST00000506924 LRRIQ3A6PVS8 624 aaPredicted RBP10.18□□□□□ -0.78
CLCN3-205ENST00000506924 CYB561D2O14569 222 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 AKAP3O75969 853 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 CLSTN1O94985 981 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 GLUD1P00367 558 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 CST3P01034 146 aaPredicted RBP10.18□□□□□ -0.78
CLCN3-205ENST00000506924 OR4Q2P0C623 313 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 TRIM49P0CI25 452 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 TRIM49CP0CI26 452 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 SRGAP2BP0DMP2 458 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 TAF6P49848 677 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 STX17P56962 302 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 RBP5P82980 135 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 MORC3Q14149 939 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 SURF1Q15526 300 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 AAK1Q2M2I8 961 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 CTXN3Q4LDR2 81 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 ZCWPW2Q504Y3 356 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 TMC5Q6UXY8 1006 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 ANKS3Q6ZW76 656 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 TRAPPC11Q7Z392 1133 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 NT5DC4Q86YG4 428 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 WDR49Q8IV35 697 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 CXorf38Q8TB03 319 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 GATAD2BQ8WXI9 593 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 CASP10Q92851 521 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 YIPF2Q9BWQ6 316 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 MMRN2Q9H8L6 949 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 MAN1C1Q9NR34 630 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.18□□□□□ -0.78
CLCN3-205ENST00000506924 FNIP2Q9P278 1114 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 MTRRQ9UBK8 725 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 FBXL5Q9UKA1 691 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 ITGA11Q9UKX5 1188 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 CTNND2Q9UQB3 1225 aa10.18□□□□□ -0.78
CLCN3-205ENST00000506924 KPNA7A9QM74 516 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 GOLGA6L22H0YM25 854 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 M0QZQ0 153 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 SYN3O14994 580 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 MBTPS2O43462 519 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 RFPL2O75678 378 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 ODC1P11926 461 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 SP100P23497 879 aaPredicted RBP10.17□□□□□ -0.78
CLCN3-205ENST00000506924 RPL13P26373 211 aaKnown RBP10.17□□□□□ -0.78
CLCN3-205ENST00000506924 AARSP49588 968 aaKnown RBP eCLIP10.17□□□□□ -0.78
CLCN3-205ENST00000506924 RPL6Q02878 288 aaKnown RBP10.17□□□□□ -0.78
CLCN3-205ENST00000506924 YWHAHQ04917 246 aaPredicted RBP10.17□□□□□ -0.78
CLCN3-205ENST00000506924 RING1Q06587 406 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 BIRC3Q13489 604 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 STIM1Q13586 685 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 SV2CQ496J9 727 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 WSCD1Q658N2 575 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 CENPPQ6IPU0 288 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 TMEM184AQ6ZMB5 413 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 HDXQ7Z353 690 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 USP37Q86T82 979 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 PPFIBP1Q86W92 1011 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 FAM186BQ8IYM0 893 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 KREMEN2Q8NCW0 462 aa10.17□□□□□ -0.78
CLCN3-205ENST00000506924 APPL2Q8NEU8 664 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms