RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 QARSP47897 775 aaKnown RBP3.64□□□□□ -1.83
TCOF1-208ENST00000506063 RXRGP48443 463 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 GPR15P49685 360 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 JAK3P52333 1124 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 COPAP53621 1224 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 RESTQ13127 1097 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 NMIQ13287 307 aaPredicted RBP3.64□□□□□ -1.83
TCOF1-208ENST00000506063 AP3B2Q13367 1082 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 ORC1Q13415 861 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 ENPP2Q13822 863 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 MYBPC2Q14324 1141 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 SART3Q15020 963 aaKnown RBP3.64□□□□□ -1.83
TCOF1-208ENST00000506063 TEAD4Q15561 434 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 FAM187BQ17R55 369 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 SMTNL2Q2TAL5 461 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 PRR16Q569H4 304 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 DCAF6Q58WW2 860 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 KIAA1324Q6UXG2 1013 aaKnown RBP3.64□□□□□ -1.83
TCOF1-208ENST00000506063 CXXC5Q7LFL8 322 aaKnown RBP3.64□□□□□ -1.83
TCOF1-208ENST00000506063 TRMT11Q7Z4G4 463 aaKnown RBP3.64□□□□□ -1.83
TCOF1-208ENST00000506063 FILIP1Q7Z7B0 1213 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 LRRTM3Q86VH5 581 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 TEX2Q8IWB9 1127 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 FAM114A1Q8IWE2 563 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 ARL14EPQ8N8R7 260 aaPredicted RBP3.64□□□□□ -1.83
TCOF1-208ENST00000506063 RDM1Q8NG50 284 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 IGDCC4Q8TDY8 1250 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 GIPC2Q8TF65 315 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 C18orf25Q96B23 403 aaPredicted RBP3.64□□□□□ -1.83
TCOF1-208ENST00000506063 MAP3K14Q99558 947 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 RIT2Q99578 217 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 JPH2Q9BR39 696 aaPredicted RBP3.64□□□□□ -1.83
TCOF1-208ENST00000506063 TMUB1Q9BVT8 246 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 TRIM9Q9C026 710 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 CAAP1Q9H8G2 361 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 ZBTB40Q9NUA8 1239 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 SEC63Q9UGP8 760 aaKnown RBP3.64□□□□□ -1.83
TCOF1-208ENST00000506063 GDAQ9Y2T3 454 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 PCDHGA7Q9Y5G6 932 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 FLNAP21333 2647 aaKnown RBP3.64□□□□□ -1.83
TCOF1-208ENST00000506063 MDC1Q14676 2089 aaKnown RBP3.64□□□□□ -1.83
TCOF1-208ENST00000506063 TTC41PQ6P2S7 1318 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 STK36Q9NRP7 1315 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 TBC1D3BA6NDS4 549 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 OR6C75A6NL08 312 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 CCER2I3L3R5 266 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 LEFTY2O00292 366 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 ZBTB39O15060 712 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 HOXC11O43248 304 aaPredicted RBP3.63□□□□□ -1.83
TCOF1-208ENST00000506063 HMMRO75330 724 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 TNFSF15O95150 251 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 OLFM2O95897 454 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 USP17L7P0C7H9 530 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 HAPLN1P10915 354 aaPredicted RBP3.63□□□□□ -1.83
TCOF1-208ENST00000506063 ADH5P11766 374 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 CKMT1AP12532 417 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 DRD2P14416 443 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 KCNE1P15382 129 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 NR1D1P20393 614 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 ABCB4P21439 1286 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 TGM2P21980 687 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 OXTRP30559 389 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 SLC5A2P31639 672 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 GRIK1P39086 918 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 RFC5P40937 340 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 ANTXR2P58335 489 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 ATP2C1P98194 919 aaPredicted RBP3.63□□□□□ -1.83
TCOF1-208ENST00000506063 YWHAHQ04917 246 aaPredicted RBP3.63□□□□□ -1.83
TCOF1-208ENST00000506063 C1QBPQ07021 282 aaKnown RBP3.63□□□□□ -1.83
TCOF1-208ENST00000506063 FUT2Q10981 343 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 ZNF211Q13398 564 aaPredicted RBP3.63□□□□□ -1.83
TCOF1-208ENST00000506063 MRPL49Q13405 166 aaKnown RBP3.63□□□□□ -1.83
TCOF1-208ENST00000506063 MXD4Q14582 209 aaPredicted RBP3.63□□□□□ -1.83
TCOF1-208ENST00000506063 INF2Q27J81 1249 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 EIF2S3LQ2VIR3 472 aaKnown RBP3.63□□□□□ -1.83
TCOF1-208ENST00000506063 LY6G5CQ5SRR4 150 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 C10orf76Q5T2E6 689 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 ATF7IP2Q5U623 682 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 CDCA2Q69YH5 1023 aaPredicted RBP3.63□□□□□ -1.83
TCOF1-208ENST00000506063 BORAQ6PGQ7 559 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 MYO7BQ6PIF6 2116 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 HEATR3Q7Z4Q2 680 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 SPATS2Q86XZ4 545 aaKnown RBP3.63□□□□□ -1.83
TCOF1-208ENST00000506063 DTX1Q86Y01 620 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 CHPFQ8IZ52 775 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 ADGRF2Q8IZF7 708 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 SLC25A45Q8N413 288 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 KIAA1958Q8N8K9 716 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 CEP120Q8N960 986 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 APPL2Q8NEU8 664 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 C9orf43Q8TAL5 461 aaPredicted RBP3.63□□□□□ -1.83
TCOF1-208ENST00000506063 SNX19Q92543 992 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 MRPS31Q92665 395 aaKnown RBP3.63□□□□□ -1.83
TCOF1-208ENST00000506063 MYRFLQ96LU7 910 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 PRIMPOLQ96LW4 560 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 SLC6A18Q96N87 628 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 GCNAQ96QF7 691 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 SEPT5Q99719 369 aaPredicted RBP3.63□□□□□ -1.83
TCOF1-208ENST00000506063 NUP58Q9BVL2 599 aa3.63□□□□□ -1.83
TCOF1-208ENST00000506063 KRT23Q9C075 422 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms