RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 HS2ST1Q7LGA3 356 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 DYMQ7RTS9 669 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 SLCO6A1Q86UG4 719 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 SFR1Q86XK3 245 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 CACTINQ8WUQ7 758 aaKnown RBP9.74□□□□□ -0.85
CCDC171-209ENST00000498725 ADAMTS14Q8WXS8 1223 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 FIZ1Q96SL8 496 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 PCIF1Q9H4Z3 704 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 CRTAC1Q9NQ79 661 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 BLOC1S4Q9NUP1 217 aa9.74□□□□□ -0.85
CCDC171-209ENST00000498725 DNAAF2Q9NVR5 837 aaKnown RBP9.74□□□□□ -0.85
CCDC171-209ENST00000498725 APOBEC2Q9Y235 224 aaKnown RBP9.74□□□□□ -0.85
CCDC171-209ENST00000498725 IGSF10Q6WRI0 2623 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 ZNF840PA6NDX5 716 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 F8VP50 259 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 ZBTB24O43167 697 aaPredicted RBP9.73□□□□□ -0.85
CCDC171-209ENST00000498725 TMEM191BP0C7N4 346 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 PYGBP11216 843 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 NDUFV2P19404 249 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 ADSSP30520 456 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 UBA7P41226 1012 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 MAGEA11P43364 429 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 ZNF131P52739 623 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 SLC7A9P82251 487 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 KCNA1Q09470 495 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 TAF10Q12962 218 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 HNRNPDQ14103 355 aaKnown RBP9.73□□□□□ -0.85
CCDC171-209ENST00000498725 HSF5Q4G112 596 aaPredicted RBP9.73□□□□□ -0.85
CCDC171-209ENST00000498725 MDH1BQ5I0G3 518 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 EGFLAMQ63HQ2 1017 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 KIAA1324Q6UXG2 1013 aaKnown RBP9.73□□□□□ -0.85
CCDC171-209ENST00000498725 RABEPKQ7Z6M1 372 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 MIB1Q86YT6 1006 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 RAD54LQ92698 747 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 FUBP3Q96I24 572 aaKnown RBP eCLIP9.73□□□□□ -0.85
CCDC171-209ENST00000498725 MMS19Q96T76 1030 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 ACOX2Q99424 681 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 MTMR12Q9C0I1 747 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 MIR1-1HGQ9H1L0 117 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 IL21RQ9HBE5 538 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 PDE11AQ9HCR9 933 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 RBAKQ9NYW8 714 aaPredicted RBP9.73□□□□□ -0.85
CCDC171-209ENST00000498725 DEC1Q9P2X7 70 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 R3HCC1Q9Y3T6 440 aaKnown RBP9.73□□□□□ -0.85
CCDC171-209ENST00000498725 RAD54BQ9Y620 910 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 TP53BP1Q12888 1972 aaPredicted RBP9.73□□□□□ -0.85
CCDC171-209ENST00000498725 SETXQ7Z333 2677 aaKnown RBP9.73□□□□□ -0.85
CCDC171-209ENST00000498725 FREM2Q5SZK8 3169 aa9.73□□□□□ -0.85
CCDC171-209ENST00000498725 BPTFQ12830 3046 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 A0A1W2PQD8 194 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 MEI4A8MW99 385 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.72□□□□□ -0.85
CCDC171-209ENST00000498725 GABRDO14764 452 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 TULP3O75386 442 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 NTSR1P30989 418 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 EIF2DP41214 584 aaKnown RBP9.72□□□□□ -0.85
CCDC171-209ENST00000498725 CACNA2D1P54289 1103 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 RBP5P82980 135 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 GAD2Q05329 585 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 CYP4F3Q08477 520 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 GRIK2Q13002 908 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 POSTNQ15063 836 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 SYCP2LQ5T4T6 812 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 TDRD10Q5VZ19 366 aaKnown RBP9.72□□□□□ -0.85
CCDC171-209ENST00000498725 SDE2Q6IQ49 451 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 FAM171BQ6P995 826 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 TOGARAM2Q6ZUX3 1019 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 TRMT11Q7Z4G4 463 aaKnown RBP9.72□□□□□ -0.85
CCDC171-209ENST00000498725 NT5DC4Q86YG4 428 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 BRSK2Q8IWQ3 736 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 CHPFQ8IZ52 775 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 SYCP3Q8IZU3 236 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 PHTF2Q8N3S3 785 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 TOP6BLQ8N6T0 577 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 LRRC52Q8N7C0 313 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 KRI1Q8N9T8 703 aaKnown RBP9.72□□□□□ -0.85
CCDC171-209ENST00000498725 KBTBD7Q8WVZ9 684 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 WBP2Q969T9 261 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 SPATA17Q96L03 361 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 MRPL44Q9H9J2 332 aaKnown RBP9.72□□□□□ -0.85
CCDC171-209ENST00000498725 PRDM16Q9HAZ2 1276 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 GDAP2Q9NXN4 497 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 SIX4Q9UIU6 781 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 ITGA11Q9UKX5 1188 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 HCN2Q9UL51 889 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 CDH9Q9ULB4 789 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 SH3BP1Q9Y3L3 701 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 STYXL1Q9Y6J8 313 aa9.72□□□□□ -0.85
CCDC171-209ENST00000498725 LOC400499M0QZD8 3231 aa9.71□□□□□ -0.85
CCDC171-209ENST00000498725 A0A1W2PQF6 199 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 FAM149AA5PLN7 773 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 WASH3PC4AMC7 463 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 CLDN5O00501 218 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 TRIM66O15016 1216 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 GJB3O75712 270 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 GCNT3O95395 438 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 OAS1P00973 400 aaKnown RBP9.71□□□□□ -0.86
CCDC171-209ENST00000498725 ATXN1LP0C7T5 689 aaKnown RBP9.71□□□□□ -0.86
CCDC171-209ENST00000498725 GNSP15586 552 aa9.71□□□□□ -0.86
CCDC171-209ENST00000498725 SCP2P22307 547 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms