RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 FBXO44Q9H4M3 255 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 POMKQ9H5K3 350 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 IL21Q9HBE4 155 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 WDR6Q9NNW5 1121 aaKnown RBP12.53□□□□□ -0.4
CUX1-210ENST00000497815 GMIPQ9P107 970 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 THEGQ9P2T0 379 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 IMPACTQ9P2X3 320 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 UXTQ9UBK9 157 aaPredicted RBP12.53□□□□□ -0.4
CUX1-210ENST00000497815 CHORDC1Q9UHD1 332 aaPredicted RBP12.53□□□□□ -0.4
CUX1-210ENST00000497815 MRPS23Q9Y3D9 190 aaKnown RBP12.53□□□□□ -0.4
CUX1-210ENST00000497815 CLUHO75153 1309 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 PAPLNO95428 1278 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 SLC34A2O95436 690 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 ZBED1O96006 694 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 ERBB2P04626 1255 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 CYP1A1P04798 512 aaPredicted RBP12.52□□□□□ -0.41
CUX1-210ENST00000497815 CEBPBP17676 345 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 SP100P23497 879 aaPredicted RBP12.52□□□□□ -0.41
CUX1-210ENST00000497815 CDH5P33151 784 aaPredicted RBP12.52□□□□□ -0.41
CUX1-210ENST00000497815 NSFP46459 744 aaKnown RBP12.52□□□□□ -0.41
CUX1-210ENST00000497815 TEAD2Q15562 447 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 PTPN20Q4JDL3 420 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 PRSS36Q5K4E3 855 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 PTCRAQ6ISU1 281 aaPredicted RBP12.52□□□□□ -0.41
CUX1-210ENST00000497815 MMS22LQ6ZRQ5 1243 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 GAREM2Q75VX8 874 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 PHLDB2Q86SQ0 1253 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 TMEM150AQ86TG1 271 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 VPS36Q86VN1 386 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 ERICH1Q86X53 443 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 DNAAF5Q86Y56 855 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 LEMD2Q8NC56 503 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 ITFG1Q8TB96 612 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 SHKBP1Q8TBC3 707 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 IPO4Q8TEX9 1081 aaKnown RBP12.52□□□□□ -0.41
CUX1-210ENST00000497815 CLEC4CQ8WTT0 213 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 STK32AQ8WU08 396 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 MYRFLQ96LU7 910 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 CHP1Q99653 195 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 SLC4A5Q9BY07 1137 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 DEF6Q9H4E7 631 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 TRPC7Q9HCX4 862 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 COMMD8Q9NX08 183 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 TAS2R14Q9NYV8 317 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 TRPM5Q9NZQ8 1165 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 ADAMTS1Q9UHI8 967 aa12.52□□□□□ -0.41
CUX1-210ENST00000497815 A0A1W2PQH9 124 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 DDX3XO00571 662 aaKnown RBP eCLIP12.51□□□□□ -0.411e-8■■□□□ 13.3
CUX1-210ENST00000497815 ZNF197O14709 1029 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 MOSPD3O75425 235 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 TADA3O75528 432 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 FGF19O95750 216 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 F11P03951 625 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 UNGP13051 313 aaPredicted RBP12.51□□□□□ -0.41
CUX1-210ENST00000497815 CDC25CP30307 473 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 ACADSBP45954 432 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 PGFP49763 221 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 KCNQ1P51787 676 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 EPHA5P54756 1037 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 STXBP5Q5T5C0 1151 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 OR6B2Q6IFH4 312 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 CCDC186Q7Z3E2 898 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 TMEM110Q86TL2 294 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 MSANTD4Q8NCY6 345 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 SUSD6Q92537 303 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 MRPS31Q92665 395 aaKnown RBP12.51□□□□□ -0.41
CUX1-210ENST00000497815 NECTIN4Q96NY8 510 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 C11orf70Q9BRQ4 267 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 SLITRK6Q9H5Y7 841 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 IL37Q9NZH6 218 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 NAGPAQ9UK23 515 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 SCML2Q9UQR0 700 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 USP3Q9Y6I4 520 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 PATJQ8NI35 1801 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 EYSQ5T1H1 3165 aa12.51□□□□□ -0.41
CUX1-210ENST00000497815 A0A087X0T9 212 aa12.5□□□□□ -0.41
CUX1-210ENST00000497815 ZNF840PA6NDX5 716 aa12.5□□□□□ -0.41
CUX1-210ENST00000497815 YJEFN3A6XGL0 299 aa12.5□□□□□ -0.41
CUX1-210ENST00000497815 E7ENQ6 273 aa12.5□□□□□ -0.41
CUX1-210ENST00000497815 GOLGA8SH3BPF8 625 aa12.5□□□□□ -0.41
CUX1-210ENST00000497815 PAPSS1O43252 624 aaPredicted RBP12.5□□□□□ -0.41
CUX1-210ENST00000497815 AKR1B10O60218 316 aa12.5□□□□□ -0.41
CUX1-210ENST00000497815 FAM228BP0C875 321 aa12.5□□□□□ -0.41
CUX1-210ENST00000497815 IL9P15248 144 aa12.5□□□□□ -0.41
CUX1-210ENST00000497815 GBP2P32456 591 aaPredicted RBP12.5□□□□□ -0.41
CUX1-210ENST00000497815 RPL34P49207 117 aaKnown RBP12.5□□□□□ -0.41
CUX1-210ENST00000497815 SNX16P57768 344 aa12.5□□□□□ -0.41
CUX1-210ENST00000497815 DAOAP59103 153 aa12.5□□□□□ -0.41
CUX1-210ENST00000497815 YWHAGP61981 247 aaKnown RBP eCLIP12.5□□□□□ -0.41
CUX1-210ENST00000497815 CENPCQ03188 943 aa12.5□□□□□ -0.41
CUX1-210ENST00000497815 GFPT1Q06210 699 aaPredicted RBP12.5□□□□□ -0.41
CUX1-210ENST00000497815 ARHGAP15Q53QZ3 475 aa12.5□□□□□ -0.41
CUX1-210ENST00000497815 GPR158Q5T848 1215 aa12.5□□□□□ -0.41
CUX1-210ENST00000497815 TXNDC8Q6A555 127 aa12.5□□□□□ -0.41
CUX1-210ENST00000497815 ACAD10Q6JQN1 1059 aa12.5□□□□□ -0.41
CUX1-210ENST00000497815 HFE2Q6ZVN8 426 aa12.5□□□□□ -0.41
CUX1-210ENST00000497815 FAM183BPQ6ZVS7 135 aa12.5□□□□□ -0.41
CUX1-210ENST00000497815 PDZD8Q8NEN9 1154 aa12.5□□□□□ -0.41
CUX1-210ENST00000497815 SPDYE1Q8NFV5 336 aaPredicted RBP12.5□□□□□ -0.41
CUX1-210ENST00000497815 C18orf8Q96DM3 657 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms