RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 GLP2RO95838 553 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 SRGNP10124 158 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 PPP3CBP16298 524 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 KCNA3P22001 575 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 BMP5P22003 454 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 HNRNPMP52272 730 aaKnown RBP eCLIP4.73□□□□□ -1.65
SMC4-225ENST00000497203 POLE2P56282 527 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 INHBEP58166 350 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 FOXO1Q12778 655 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 BIRC3Q13489 604 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 TUBB3Q13509 450 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 SPARCL1Q14515 664 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 MAPKAPK3Q16644 382 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 SLC5A9Q2M3M2 681 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.73□□□□□ -1.65
SMC4-225ENST00000497203 ICE2Q659A1 982 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 VWA1Q6PCB0 445 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 CRTC1Q6UUV9 634 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 ZNF280BQ86YH2 543 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 GATAD2AQ86YP4 633 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 SLC15A3Q8IY34 581 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 CACNA2D3Q8IZS8 1091 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 FAM9AQ8IZU1 332 aaPredicted RBP4.73□□□□□ -1.65
SMC4-225ENST00000497203 ATG16L2Q8NAA4 619 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 FAM71BQ8TC56 605 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 PPP2R3CQ969Q6 453 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 C18orf8Q96DM3 657 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 PCDHAC1Q9H158 963 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 LUZP4Q9P127 313 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 LRFN1Q9P244 771 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 NDRG4Q9ULP0 352 aaKnown RBP4.73□□□□□ -1.65
SMC4-225ENST00000497203 TBC1D30Q9Y2I9 924 aa4.73□□□□□ -1.65
SMC4-225ENST00000497203 A0A087WZ62 844 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 CCDC189A1A4V9 331 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 LGALS16A8MUM7 142 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 KIAA0355O15063 1070 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 YY2O15391 372 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 PROM1O43490 865 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 CCNT2O60583 730 aaKnown RBP4.72□□□□□ -1.65
SMC4-225ENST00000497203 SRGAP2O75044 1071 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 PRKAR1BP31321 381 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 SLC5A2P31639 672 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 ATICP31939 592 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 CXCR5P32302 372 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 SERPINF1P36955 418 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 CLK3P49761 638 aaKnown RBP4.72□□□□□ -1.65
SMC4-225ENST00000497203 MRPS35P82673 323 aaKnown RBP4.72□□□□□ -1.65
SMC4-225ENST00000497203 ZNF169Q14929 603 aaPredicted RBP4.72□□□□□ -1.65
SMC4-225ENST00000497203 SMN1Q16637 294 aaKnown RBP4.72□□□□□ -1.65
SMC4-225ENST00000497203 ZIK1Q3SY52 487 aaPredicted RBP4.72□□□□□ -1.65
SMC4-225ENST00000497203 RBM20Q5T481 1227 aaKnown RBP4.72□□□□□ -1.65
SMC4-225ENST00000497203 CERCAMQ5T4B2 595 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 ARHGAP40Q5TG30 622 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 KIAA0408Q6ZU52 694 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 RFX8Q6ZV50 586 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 CCDC28AQ8IWP9 274 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 MYCBPAPQ8TBZ2 947 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 IPO4Q8TEX9 1081 aaKnown RBP4.72□□□□□ -1.65
SMC4-225ENST00000497203 FAM227BQ96M60 508 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 TRIM5Q9C035 493 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 CXorf36Q9H7Y0 433 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 FOXJ2Q9P0K8 574 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 ZMYND8Q9ULU4 1186 aaPredicted RBP4.72□□□□□ -1.65
SMC4-225ENST00000497203 DGKBQ9Y6T7 804 aa4.72□□□□□ -1.65
SMC4-225ENST00000497203 hCG_1984214I3L0E3 225 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 MGST3O14880 152 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 PIP5K1BO14986 540 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 CD3EAPO15446 510 aaKnown RBP4.71□□□□□ -1.66
SMC4-225ENST00000497203 PEX1O43933 1283 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 FGAP02671 866 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 ITGA5P08648 1049 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 HSD3B1P14060 373 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 FOLR3P41439 243 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 PDE6CP51160 858 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 ITGA8P53708 1063 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 SIM1P81133 766 aaPredicted RBP4.71□□□□□ -1.66
SMC4-225ENST00000497203 NSUN2Q08J23 767 aaKnown RBP eCLIP4.71□□□□□ -1.66
SMC4-225ENST00000497203 GALNT1Q10472 559 aaPredicted RBP4.71□□□□□ -1.66
SMC4-225ENST00000497203 PRKG1Q13976 671 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 CCNIQ14094 377 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 KIAA0895LQ68EN5 471 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 RGS7BPQ6MZT1 257 aaPredicted RBP4.71□□□□□ -1.66
SMC4-225ENST00000497203 LDHAL6AQ6ZMR3 332 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 KCTD20Q7Z5Y7 419 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 FAM109AQ8N4B1 249 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 TOR1AIP2Q8NFQ8 470 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 ACTRT2Q8TDY3 377 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 FAM136AQ96C01 138 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 EID2BQ96D98 161 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 ZG16BQ96DA0 208 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 ZDHHC12Q96GR4 267 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 PRPF18Q99633 342 aaKnown RBP4.71□□□□□ -1.66
SMC4-225ENST00000497203 TMEM120AQ9BXJ8 343 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 MAGEH1Q9H213 219 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 SLC25A32Q9H2D1 315 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 PRDM13Q9H4Q3 707 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 HELLSQ9NRZ9 838 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 DNAJB11Q9UBS4 358 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 ZNHIT2Q9UHR6 403 aa4.71□□□□□ -1.66
SMC4-225ENST00000497203 HPSEQ9Y251 543 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms