RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 PFKFB2O60825 505 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 DEXIO95424 95 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 TIMP1P01033 207 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 FOSP01100 380 aaPredicted RBP5.45□□□□□ -1.54
CSMD3-208ENST00000497026 C4BPAP04003 597 aaKnown RBP5.45□□□□□ -1.54
CSMD3-208ENST00000497026 LGALS2P05162 132 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 FAM86B2P0C5J1 330 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 CYP2C9P11712 490 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 FDPSP14324 419 aaKnown RBP5.45□□□□□ -1.54
CSMD3-208ENST00000497026 CASQ1P31415 396 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 RBL2Q08999 1139 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 MTMR1Q13613 665 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 BMS1Q14692 1282 aaKnown RBP5.45□□□□□ -1.54
CSMD3-208ENST00000497026 CDSNQ15517 529 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 DGKDQ16760 1214 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 WDR72Q3MJ13 1102 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 TM4SF20Q53R12 229 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 FAM47CQ5HY64 1035 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 FIGNQ5HY92 759 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 CCDC183Q5T5S1 534 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 JAKMIP3Q5VZ66 844 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 XRRA1Q6P2D8 792 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 NFRKBQ6P4R8 1299 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 SESTD1Q86VW0 696 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 NECAB1Q8N987 351 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 GPT2Q8TD30 523 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 AJUBAQ96IF1 538 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 SPATA33Q96N06 139 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 SENP7Q9BQF6 1050 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 KLC2Q9H0B6 622 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 WNT8AQ9H1J5 351 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 DEF6Q9H4E7 631 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 CD248Q9HCU0 757 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 KCNH7Q9NS40 1196 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 GJB4Q9NTQ9 266 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 ARGLU1Q9NWB6 273 aaPredicted RBP5.45□□□□□ -1.54
CSMD3-208ENST00000497026 RSPH14Q9UHP6 348 aa5.45□□□□□ -1.54
CSMD3-208ENST00000497026 KIF2AO00139 706 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-208ENST00000497026 CPLX1O14810 134 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 PPFIA4O75335 1185 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 ADCY5O95622 1261 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 CYP3A4P08684 503 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 ARP10275 920 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 CSF2RAP15509 400 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 HOXC8P31273 242 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 CYP2C18P33260 490 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 MCM2P49736 904 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 NEK4P51957 841 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 SP4Q02446 784 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 ITGB3BPQ13352 177 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-208ENST00000497026 NEDD9Q14511 834 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 USP10Q14694 798 aaKnown RBP5.44□□□□□ -1.54
CSMD3-208ENST00000497026 SHHQ15465 462 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 KIAA0753Q2KHM9 967 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 LRIT3Q3SXY7 679 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 BRDTQ58F21 947 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-208ENST00000497026 MFSD5Q6N075 450 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 NSUN7Q8NE18 718 aaKnown RBP5.44□□□□□ -1.54
CSMD3-208ENST00000497026 CCDC148Q8NFR7 591 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 KIAA1524Q8TCG1 905 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 GTF3C6Q969F1 213 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 LENG9Q96B70 501 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 SCLYQ96I15 445 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 WWC2-AS2Q96NR7 200 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 LMF1Q96S06 567 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 PCYT2Q99447 389 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 LBHD1Q9BQE6 289 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-208ENST00000497026 MXRA8Q9BRK3 442 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 SEZ6LQ9BYH1 1024 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 GLT8D2Q9H1C3 349 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 HIPK3Q9H422 1215 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 MLXIPQ9HAP2 919 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 C6orf50Q9HD87 102 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 SH3GLB2Q9NR46 395 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 UCKL1Q9NWZ5 548 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 HDAC6Q9UBN7 1215 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 CEP83Q9Y592 693 aa5.44□□□□□ -1.54
CSMD3-208ENST00000497026 V9GYY5 206 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-208ENST00000497026 NFASCO94856 1347 aa5.43□□□□□ -1.54
CSMD3-208ENST00000497026 EMSYQ7Z589 1322 aa5.43□□□□□ -1.54
CSMD3-208ENST00000497026 GSTTP1A0A1W2PQM5 241 aa5.43□□□□□ -1.54
CSMD3-208ENST00000497026 GSTA4O15217 222 aa5.43□□□□□ -1.54
CSMD3-208ENST00000497026 MAFGO15525 162 aa5.43□□□□□ -1.54
CSMD3-208ENST00000497026 JAK2O60674 1132 aa5.43□□□□□ -1.54
CSMD3-208ENST00000497026 CCNE2O96020 404 aa5.43□□□□□ -1.54
CSMD3-208ENST00000497026 MMEP08473 750 aa5.43□□□□□ -1.54
CSMD3-208ENST00000497026 CCDC172P0C7W6 258 aa5.43□□□□□ -1.54
CSMD3-208ENST00000497026 TNFRSF1AP19438 455 aa5.43□□□□□ -1.54
CSMD3-208ENST00000497026 GNA11P29992 359 aa5.43□□□□□ -1.54
CSMD3-208ENST00000497026 CIITAP33076 1130 aa5.43□□□□□ -1.54
CSMD3-208ENST00000497026 TCF7P36402 384 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-208ENST00000497026 CCL23P55773 120 aa5.43□□□□□ -1.54
CSMD3-208ENST00000497026 IL13RA1P78552 427 aa5.43□□□□□ -1.54
CSMD3-208ENST00000497026 SATB1Q01826 763 aa5.43□□□□□ -1.54
CSMD3-208ENST00000497026 AKAP17AQ02040 695 aaKnown RBP5.43□□□□□ -1.54
CSMD3-208ENST00000497026 FPGSQ05932 587 aa5.43□□□□□ -1.54
CSMD3-208ENST00000497026 GPNMBQ14956 572 aa5.43□□□□□ -1.54
CSMD3-208ENST00000497026 ANKRD1Q15327 319 aa5.43□□□□□ -1.54
CSMD3-208ENST00000497026 PTGISQ16647 500 aa5.43□□□□□ -1.54
CSMD3-208ENST00000497026 TRIM71Q2Q1W2 868 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms