RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 TAF2Q6P1X5 1199 aa4.47□□□□□ -1.69
CLK1-214ENST00000496205 GGT6Q6P531 493 aa4.47□□□□□ -1.69
CLK1-214ENST00000496205 KCTD20Q7Z5Y7 419 aa4.47□□□□□ -1.69
CLK1-214ENST00000496205 TXLNBQ8N3L3 684 aa4.47□□□□□ -1.69
CLK1-214ENST00000496205 ANKRD42Q8N9B4 389 aa4.47□□□□□ -1.69
CLK1-214ENST00000496205 TOR1AIP2Q8NFQ8 470 aa4.47□□□□□ -1.69
CLK1-214ENST00000496205 TMEM41AQ96HV5 264 aa4.47□□□□□ -1.69
CLK1-214ENST00000496205 SLC46A1Q96NT5 459 aa4.47□□□□□ -1.69
CLK1-214ENST00000496205 HAPLN3Q96S86 360 aa4.47□□□□□ -1.69
CLK1-214ENST00000496205 MESP1Q9BRJ9 268 aa4.47□□□□□ -1.69
CLK1-214ENST00000496205 STK33Q9BYT3 514 aa4.47□□□□□ -1.69
CLK1-214ENST00000496205 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.47□□□□□ -1.69
CLK1-214ENST00000496205 TBC1D23Q9NUY8 699 aa4.47□□□□□ -1.69
CLK1-214ENST00000496205 INTS13Q9NVM9 706 aa4.47□□□□□ -1.69
CLK1-214ENST00000496205 LUZP4Q9P127 313 aa4.47□□□□□ -1.69
CLK1-214ENST00000496205 IGSF9Q9P2J2 1179 aa4.47□□□□□ -1.69
CLK1-214ENST00000496205 GRHPRQ9UBQ7 328 aa4.47□□□□□ -1.69
CLK1-214ENST00000496205 ITGB1BP2Q9UKP3 347 aa4.47□□□□□ -1.69
CLK1-214ENST00000496205 TMX2Q9Y320 296 aa4.47□□□□□ -1.69
CLK1-214ENST00000496205 PRAMEF33A0A0G2JMD5 474 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 CCDC189A1A4V9 331 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 AQP12BA6NM10 295 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 CLCA1A8K7I4 914 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 POLRMTO00411 1230 aaKnown RBP4.46□□□□□ -1.7
CLK1-214ENST00000496205 ADAMTS3O15072 1205 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 PRAMEF10O60809 474 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 MOSPD3O75425 235 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 LATS1O95835 1130 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 GABRB3P28472 473 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 HNRNPMP52272 730 aaKnown RBP eCLIP4.46□□□□□ -1.7
CLK1-214ENST00000496205 TUBA4AP68366 448 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 POU6F2P78424 691 aaPredicted RBP4.46□□□□□ -1.7
CLK1-214ENST00000496205 PUM3Q15397 648 aaKnown RBP4.46□□□□□ -1.7
CLK1-214ENST00000496205 ELF2Q15723 593 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 TMEM95Q3KNT9 176 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 CD300EQ496F6 205 aaPredicted RBP4.46□□□□□ -1.7
CLK1-214ENST00000496205 FCRL6Q6DN72 434 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 TAPT1Q6NXT6 567 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 MYLK4Q86YV6 388 aaPredicted RBP4.46□□□□□ -1.7
CLK1-214ENST00000496205 MYCT1Q8N699 235 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 GLIS1Q8NBF1 620 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 PSD4Q8NDX1 1056 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 MYRIPQ8NFW9 859 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 MYCBPAPQ8TBZ2 947 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 IPO4Q8TEX9 1081 aaKnown RBP4.46□□□□□ -1.7
CLK1-214ENST00000496205 ZNF566Q969W8 418 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 LRRC46Q96FV0 321 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 WACQ9BTA9 647 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 CNPPD1Q9BV87 410 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 SELENOOQ9BVL4 669 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 TTYH3Q9C0H2 523 aa4.46□□□□□ -1.7
CLK1-214ENST00000496205 WDR27A2RRH5 827 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 H7C4K7 107 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 RAB27BO00194 218 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 SUN1O94901 812 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 CHEK2O96017 543 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 ALDH9A1P49189 494 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 FPGSQ05932 587 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 STARD3Q14849 445 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 LIN54Q6MZP7 749 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 SLC30A10Q6XR72 485 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 ZNF66Q6ZN08 573 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 CATSPERGQ6ZRH7 1159 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 USP49Q70CQ1 688 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 TMPRSS9Q7Z410 1059 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 SUGP1Q8IWZ8 645 aaKnown RBP4.45□□□□□ -1.7
CLK1-214ENST00000496205 SYTL1Q8IYJ3 562 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 AOPEPQ8N6M6 819 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 FANCBQ8NB91 859 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 DDX17Q92841 729 aaKnown RBP4.45□□□□□ -1.7
CLK1-214ENST00000496205 SPSB4Q96A44 273 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 PGBD1Q96JS3 809 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 TRIB1Q96RU8 372 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 HERPUD2Q9BSE4 406 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 OBP2BQ9NPH6 170 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 SAGE1Q9NXZ1 904 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 ZNF212Q9UDV6 495 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 SERGEFQ9UGK8 458 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 SLC39A10Q9ULF5 831 aa4.45□□□□□ -1.7
CLK1-214ENST00000496205 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 LGALS16A8MUM7 142 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 hCG_1984214I3L0E3 225 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 NPC1O15118 1278 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 THAP12O43422 761 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 RASSF9O75901 435 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 FGAP02671 866 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 MYL4P12829 197 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 BTF3P20290 206 aaKnown RBP4.44□□□□□ -1.7
CLK1-214ENST00000496205 PAX3P23760 479 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 ACVR2AP27037 513 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 CCKBRP32239 447 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 VIPR2P41587 438 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 FOXG1P55316 489 aaPredicted RBP4.44□□□□□ -1.7
CLK1-214ENST00000496205 LILRA4P59901 499 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 KCNAB1Q14722 419 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 ZRSR2Q15696 482 aaKnown RBP4.44□□□□□ -1.7
CLK1-214ENST00000496205 NPY5RQ15761 445 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 SLC44A4Q53GD3 710 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 ARHGAP15Q53QZ3 475 aa4.44□□□□□ -1.7
CLK1-214ENST00000496205 RUSC1-AS1Q66K80 236 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms