RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 CTNNB1P35222 781 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 PTPN7P35236 360 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 RFC1P35251 1148 aaPredicted RBP10.75□□□□□ -0.69
HDAC3-214ENST00000495485 PBX2P40425 430 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 PLA2G4AP47712 749 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 CLCNKBP51801 687 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 SLC7A5Q01650 507 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 ORC1Q13415 861 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 HLTFQ14527 1009 aaKnown RBP eCLIP10.75□□□□□ -0.69
HDAC3-214ENST00000495485 UPP1Q16831 310 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 PKDCCQ504Y2 493 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 BOLA3Q53S33 107 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 TFDP3Q5H9I0 405 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 KCNT2Q6UVM3 1135 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 CEP128Q6ZU80 1094 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 COLGALT1Q8NBJ5 622 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 BBOF1Q8ND07 529 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 ATL2Q8NHH9 583 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 IFT81Q8WYA0 676 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 LPPQ93052 612 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 TMEM169Q96HH4 297 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 RUFY1Q96T51 708 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 ACBD6Q9BR61 282 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 TRIM62Q9BVG3 475 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 COLEC11Q9BWP8 271 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 MAK16Q9BXY0 300 aaKnown RBP10.75□□□□□ -0.69
HDAC3-214ENST00000495485 DUSP16Q9BY84 665 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 OSBPL8Q9BZF1 889 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 UBXN6Q9BZV1 441 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 DDX47Q9H0S4 455 aaKnown RBP10.75□□□□□ -0.69
HDAC3-214ENST00000495485 CWH43Q9H720 699 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 LRRC19Q9H756 370 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 GOLGA2P5Q9HBQ8 144 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 LRRC4Q9HBW1 653 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 DDX43Q9NXZ2 648 aaKnown RBP10.75□□□□□ -0.69
HDAC3-214ENST00000495485 SPG21Q9NZD8 308 aa10.75□□□□□ -0.69
HDAC3-214ENST00000495485 DMGDHQ9UI17 866 aaKnown RBP10.75□□□□□ -0.69
HDAC3-214ENST00000495485 MRPL42Q9Y6G3 142 aaKnown RBP10.75□□□□□ -0.69
HDAC3-214ENST00000495485 LCHNA4D1U4 455 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 E5RJQ4 531 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 F8VP50 259 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 DPYSL4O14531 572 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 SPTLC1O15269 473 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 PRPSAP2O60256 369 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 HSF2BPO75031 334 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 B3GAT3O94766 335 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 ECEL1O95672 775 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 C1RP00736 705 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 POMCP01189 267 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 CYP11A1P05108 521 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 GLI1P08151 1106 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 LINC00271P0C7V0 271 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 FAM200BP0CF97 657 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 TYMPP19971 482 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 GJC1P36383 396 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 COILP38432 576 aaPredicted RBP10.74□□□□□ -0.69
HDAC3-214ENST00000495485 AARSP49588 968 aaKnown RBP eCLIP10.74□□□□□ -0.69
HDAC3-214ENST00000495485 TSPY1Q01534 308 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 CREMQ03060 361 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 CAV1Q03135 178 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 PDE4CQ08493 712 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 CALCOCO2Q13137 446 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 MTMR3Q13615 1198 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 PDK2Q15119 407 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 CCNG2Q16589 344 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 PAN2Q504Q3 1202 aaKnown RBP10.74□□□□□ -0.69
HDAC3-214ENST00000495485 TIGD5Q53EQ6 642 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 WSCD1Q658N2 575 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 VSIG1Q86XK7 387 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 COLGALT2Q8IYK4 626 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 DEFB123Q8N688 67 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 C12orf29Q8N999 325 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 KCTD6Q8NC69 237 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 GSTCDQ8NEC7 633 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 KCTD13Q8WZ19 329 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 SLCO2A1Q92959 643 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 CAVIN3Q969G5 261 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 LRCH3Q96II8 777 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 TBCBQ99426 244 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 SYT15Q9BQS2 421 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 ERP44Q9BS26 406 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 FUT8Q9BYC5 575 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 CXCL16Q9H2A7 254 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 PRDM16Q9HAZ2 1276 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 NGRNQ9NPE2 291 aaKnown RBP10.74□□□□□ -0.69
HDAC3-214ENST00000495485 RRN3Q9NYV6 651 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 MTRF1LQ9UGC7 380 aaKnown RBP10.74□□□□□ -0.69
HDAC3-214ENST00000495485 AMACRQ9UHK6 382 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 CYTH4Q9UIA0 394 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 INPP5FQ9Y2H2 1132 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 FAN1Q9Y2M0 1017 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 PRUNE2Q8WUY3 3088 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 COL6A3P12111 3177 aa10.74□□□□□ -0.69
HDAC3-214ENST00000495485 CASTOR2A6NHX0 329 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 M0QZQ0 153 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 MAP2K7O14733 419 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 SEC31AO94979 1220 aaKnown RBP10.73□□□□□ -0.69
HDAC3-214ENST00000495485 GALTP07902 379 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 MYOGP15173 224 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 NPR3P17342 541 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms